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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL96968_cuf6 >transcript:BL96968_cuf6-protein ID=transcript:BL96968_cuf6-protein|Name=transcript:BL96968_cuf6|organism=Branchiostoma lanceolatum|type=polypeptide|length=104bp
LDMTSAKLFIHLLVLGLAPGTSYAFFNYPPGAWGPWGAWSNECGCSDTSR
YRTRSCVLLSGQVVTDNMQMIFTPGCGNFGMNVGDNMETVACPECTAIPE
LETW Run BLAST on NCBI mRNA from alignment at Sc0000044:1108933..1112378- Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL96968_cuf6 ID=transcript:BL96968_cuf6|Name=transcript:BL96968_cuf6|organism=Branchiostoma lanceolatum|type=mRNA|length=3446bp|location=Sequence derived from alignment at Sc0000044:1108933..1112378- (Branchiostoma lanceolatum)
CTTGGACATGACTTCCGCCAAACTCTTCATTCACCTGTTGGTGTTGGGTC
TGGCGCCGGGCACCAGCTATGCCTTCTTCAGTAAGAATCATATTTTCGTC
ATTCTTTTCTTAAAGTATATAATTTTTCTCACATCTTTATAAATATTGGC
AGGCAAGCAATGCCCGATGACCATAACGCCGGTAGTGCACATTTAGGGAG
ACATTGATTTTATCTTGAAATATCTGTCTTTCCGTAATTACGACAGTTTC
AGTGGAAATGTTAGTCTGTTCCTCAGCACTTTACTTGATATCAACAATCT
TTATTGACGCAACAAAAGTACAGTGACTCTCGTAAGGTCTCCTTAATCCA
TCCATACATACATACATACATACATACATACATGCTAACAAACAAAGTTA
ATACTAATGAGTTTGTTTACAAACAATCATATGGAATAGGGAAACATATT
GAAATTTAGCGTGTCGTATACTTATACATTACTTGTTCTTATGTCCAAAC
ATTCTTTGATGTATATACCTATTTGAACACAGTAAAGATTGTCTCCTCTC
AGTATGTAATCAAATCTATCAACAGAATGGAGCGTATTGAATTCACTTGA
TCAAGTGGAAATAAAGGTGAACAGCTAAGAGCGTTTATCCTCATATCTTG
GAAAATTCATGATATCTCGTGGTTTACAGTAAGCAAAGGGGTGTCTAAGT
GAGTGCCGCTGTGAATGACCATTGGTGCTTAGAAATTGCAGCATATAGGA
GTTACTTGCATAGACACTCTGGCTCTCTACCTGACATTGAAATCGGGATA
AACAAGAGTATCGAAGCTAAGGGGAAAAACATTGAAATTGGAAAACACTT
TCCAATAAGGCCTTTTGCCCTGAAGACATGGCCATGGTCACATGAGGAGG
GTGACATAGTTCTTTGTGGCTTGCGAACAGAATCTGTCACACAACGTCGC
CTCAATAACAGCCTGTACATTAGATAGTTCAAGATATACAACTGAATCAA
TTAAAATTGGCCCAAATATTAAAGCAACATTACGTGCTAGATATTACATA
AACACACACACTCGCATACACACCTGCAAAACACACACATTGAATATGCA
TGGGGATCGACTGATTTTGCCTTTATTCCTGGCCTGGCTTCGTATACTAA
GATATAACGGCGTTATCCACGTCTAGTGCCAGTGATGTCTGACAAGGCCG
GTAGGTGACAGGCAGACTCGGCCAAACCGGCTGCAGGGGAAGGACGAGTC
TGGGATTGGTGCAGTGGCGATGTGGTTAATTTTACATAAAGTATTCGAAT
CTCTATCTAAAGCCCACCTCTCACTGGACCCGTGGCACGCTGGCGGCGTC
GCTGCATCCTAAACTGGATTTGTGTTCCCCTTGACTTTATATTGCGAATA
TCATTCAAAATGTACAAGTATGACCAAAAAGACATCAAAACACACAAAGC
TTTTAAAAAGATTCGATTTTTGTCAATGAAATTCGTTGACTGCTTTGTCA
ATTCGACCGGCCGCAGCGAGACACCGCACAAGCGAGCCGCGGGTCCAGTG
AGAGGGGGGCTTTACGTACACTGGCTTGTTTCCCCCCCCCCCAGACTACC
CTCCCGGCGCGTGGGGCCCGTGGGGAGCCTGGTCTAACGAGTGCGGCTGT
TCAGACACGTCCAGATACCGGACACGGAGCTGCGTGCTGCTGGTGCGTGC
CAATATTTCTATTTCATTTACTAATTATCAAACATTCAAGAGCGAAAAAT
CATACACTTACAGCCATTTAGACAGCATAGAAAATGAAATACCTAACAAA
AGAATCAATGATTCAGATAATAAGAAGCAGGAAAACACAGATCAGGTGTA
AATCCAAGAGTATTCCAAAGTCCACGCAATAAAGTTCTTCATGTACATTT
TTATAATAATGATAACTTAATTGCACAACAATTGTACAAGTACAAAGTAT
GTCATCCAATGGTACATAGATAACATTCTATTAGGCTAATCAATGTATCT
AATACAATATGGTGTAGCAGTACGGGATGACAATGGGATGTTACAATCAT
TGGAGGAGTTTCTAACGTCTAGACATTCTTTGATATATTTTCCAATGAAT
ACCATGCATGGGTTGTCACATGTCATTATGTACTTAAATTTGCTATTCAA
GTCCATTGAGATAAATCCTAGTTAATCCGACGACAGCATTGAGTATAGTG
AATTACGTATATCAAAATATTTGGGACAAACAATCAAAAAGTGATATTCG
TCTTTAATTACCTCTGGACAAAATGGACAAACCATTTGGTCGATAGAAAG
TTTTTGAAACCTCCCCGTTTCTATACTTAATTTATGACAGCCAATTCTGA
GCTTAGTGATTGCCCTTAGAAACCACTGAATGACCCTGCGTGTTTCACCC
TAGAGCGGCCAAGTCGTGACGGACAACATGCAGATGATATTCACTCCGGG
CTGCGGCAACTTCGGCATGAACGTGGGGGACAACATGGAGACGGTCGCCT
GTCCGGAATGTACCGCTATCCGTAAGTCTATCCAGGATGTACCGCTATCC
GTAAGTCTATCCGGAATGTACCGCTATCCGTAAGTCTATCCGGAATGTAC
CGCTATCCGTAAGTCTATCCGGAATGTACGGCTATCCGTAAGTCTATCCG
GAATGCACCGCTAACAGTAAGTCTGTCCGGAATGTACCGCTGTCCGTAAG
TCTTTCCGGAATGCATCGCTATCCGTAAGTCTATCCGGAATGTACCGCTG
TCCGTAAGTCATTTCGAAATGTACCGCTGTCCGTAAGTCATTTCGGAATA
TACCATATTTCACTCCATCTTAGATTGTTCCTAAAATTGAAATAAAAGAA
GCCCCAGTGCGAGAATGGATTCTTCACAAAAAATACTATCGACACAAAAA
AGACTATGATATGAAAACCCCAGTCCAAAAGTGAACTTGAACGCCAAAAT
GTAAAATGGACAAGTGCAAAAACAATTCTGCTCAAAAGGTGTACTTTGAA
TTGAATCTCCATTACATTCAATCGGGGAAAGTCGTAGAAACGTTTACGAG
GACAGAGTTTCAGCAACGTGGTTCCCCCCACACTCACTGTTTGTTTTGGG
GTAAAAGATGCACCCACCAAAATTGAATGTAAAGTCTTAGGAGGAGATTT
GCTACGTTATGGTATGTGTGTAGTCAGCTACCGGATTCAGAGACAGAAAA
AGACATATTCAGGTTCAAATGCGACGATAAGGTCATGTATTGACATGCAA
GATCTGTTAGGTACAAATTCCTCTTTACTGCCCCATCTGGCTAGCTGAGT
TGGAGACCTGGAATGCTTGGACGGAGTGTTCGGAGCCGTGCCTGGGGCAG
TCGTACCGTAGCAGGGTCCGCCGCTGTAGTTACTATGTTTCTGTTAGCTA
CATCTTCCTCTTTACTGTCCCATCTAGCCGAGCTGGAGACCTGGAA Coding sequence (CDS) from alignment at Sc0000044:1108933..1112378- >transcript:BL96968_cuf6 ID=transcript:BL96968_cuf6|Name=transcript:BL96968_cuf6|organism=Branchiostoma lanceolatum|type=CDS|length=1248bp|location=Sequence derived from alignment at Sc0000044:1108933..1112378- (Branchiostoma lanceolatum)
TTGGACATGACTTCCGCCAAACTCTTCATTCACCTGTTGGTGTTGGGTCT
GGCGCCGGGCACCAGCTATGCCTTCTTCAACTACCCTCCCGGCGCGTGGG
GCCCGTGGGGAGCCTGGTCTAACGAGTGCGGCTGTTCAGACACGTCCAGA
TACCGGACACGGAGCTGCGTGCTGCTGAGCGGCCAAGTCGTGACGGACAA
CATGCAGATGATATTCACTCCGGGCTGCGGCAACTTCGGCATGAACGTGG
GGGACAACATGGAGACGGTCGCCTGTCCGGAATGTACCGCTATCCCCGAG
CTGGAGACCTGGTTGGACATGACTTCCGCCAAACTCTTCATTCACCTGTT
GGTGTTGGGTCTGGCGCCGGGCACCAGCTATGCCTTCTTCAACTACCCTC
CCGGCGCGTGGGGCCCGTGGGGAGCCTGGTCTAACGAGTGCGGCTGTTCA
GACACGTCCAGATACCGGACACGGAGCTGCGTGCTGCTGAGCGGCCAAGT
CGTGACGGACAACATGCAGATGATATTCACTCCGGGCTGCGGCAACTTCG
GCATGAACGTGGGGGACAACATGGAGACGGTCGCCTGTCCGGAATGTACC
GCTATCCCCGAGCTGGAGACCTGGTTGGACATGACTTCCGCCAAACTCTT
CATTCACCTGTTGGTGTTGGGTCTGGCGCCGGGCACCAGCTATGCCTTCT
TCAACTACCCTCCCGGCGCGTGGGGCCCGTGGGGAGCCTGGTCTAACGAG
TGCGGCTGTTCAGACACGTCCAGATACCGGACACGGAGCTGCGTGCTGCT
GAGCGGCCAAGTCGTGACGGACAACATGCAGATGATATTCACTCCGGGCT
GCGGCAACTTCGGCATGAACGTGGGGGACAACATGGAGACGGTCGCCTGT
CCGGAATGTACCGCTATCCCCGAGCTGGAGACCTGGTTGGACATGACTTC
CGCCAAACTCTTCATTCACCTGTTGGTGTTGGGTCTGGCGCCGGGCACCA
GCTATGCCTTCTTCAACTACCCTCCCGGCGCGTGGGGCCCGTGGGGAGCC
TGGTCTAACGAGTGCGGCTGTTCAGACACGTCCAGATACCGGACACGGAG
CTGCGTGCTGCTGAGCGGCCAAGTCGTGACGGACAACATGCAGATGATAT
TCACTCCGGGCTGCGGCAACTTCGGCATGAACGTGGGGGACAACATGGAG
ACGGTCGCCTGTCCGGAATGTACCGCTATCCCCGAGCTGGAGACCTGG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000044 | genome | Sc0000044:1108933..1112378 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL96968_cuf6 |
| Biotype | protein_coding |
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