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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL96956_cuf7 >transcript:BL96956_cuf7-protein ID=transcript:BL96956_cuf7-protein|Name=transcript:BL96956_cuf7|organism=Branchiostoma lanceolatum|type=polypeptide|length=265bp
MSAQIPRSKSYQNTCSEIAALLEKNAFYPKLLISVXKKNASYPKLLISVS
QRSKTWTGNVGKNLSQWNQMYNSSLTTNVSCPNTRTGSDENQWEHMGKQQ
SVQTPGTQNAMDIQTPDTLAISSAIHVLQTMLITPTKTTFLKTMMSLASI
MQAIDSPCMAMQRTVEREIIMIYSQVSVAYCIFHIYVIPGGPRNVRYGCS
ASCDNFPFHTRFYFYHTGFHRILRMFFECAGCAVVENSNAGFGGWIQCCY
GFVFLRGHKTLNFSH Run BLAST on NCBI mRNA from alignment at Sc0000044:2051235..2053384- Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL96956_cuf7 ID=transcript:BL96956_cuf7|Name=transcript:BL96956_cuf7|organism=Branchiostoma lanceolatum|type=mRNA|length=2150bp|location=Sequence derived from alignment at Sc0000044:2051235..2053384- (Branchiostoma lanceolatum)
GGACAAGCCACATGTTCGCAAGAAGCGGGCTCCACCTTTTCAACACCATG
ATGCCTTCGAAAACAGCATCAAACAAGTAACCAGTGTTTGTTTTTTATCT
TAGTTATAAATCATAGACCAGTAGGTTGATATGCTATGCTGTTACTAGAC
ATTACCTTAAGTTTTCAATACACTGTGATCTATTATTGTATGGTTTAAAA
TCATTGAAAACAGCGCGCGAGACAAACCCATAGAAAATGAGTAGAGTATA
ATCCGTTAAAAGTAAGGAACACTTCAAGAAGAACGCTAGTGGTGTTGAAC
TGTGTTGTATTTTAGACTGACTTTCGTATAATGTTAGGTCATGAATCATA
ACTATGTAGACCAATTGAATTGCTCACATTGATGAGCTATTTTCCTTATG
TTTAATACAGAATAGGGCAGCTATAAAAACGTAGCACTTTGGCTTCCCCC
AAGATCTGCTTGAAACTTAACTGTTTGTACCAAGGTACACACTTCCTCCA
CCCCCACAGACTCTGAGTTTATTCAGTCACATCACCATTCCATTTATCTT
CATTTTATCCCAGAACCAACACATTCGATTGTCGATTACTAAGGGTTTGT
GAGCAAGATGTTTGTATGTTTTATAGAAGGCAGCCCGCATCAAAACAGCA
TTTCACGACGACGTAAATCGAGATAGACGTGAGGCGATGGACAACATTCA
AGAAGCACAGAAGCCCCTCCTGCCCAGGGCTGTGCATCGCGACCGTCGTA
ACTTCGAAGAACATGTTGTCGAGACCCGAAATTCGAACATAGAGCCAAAA
GCTGTTCATCGCGATCGTCGTAATTACGAAAACGATGTCCGCCCAGATCC
CGAGATCCAAATCTTATCAGAACACTTGCAGCGAGATCGCCGCACTGCTG
GAGAAGAACGCATTCTACCCAAAGCTGCTGATCTCAGTCANGAAGAAGAA
CGCATCCTACCCAAAGCTGCTGATCTCAGTCAGTCAAAGATCGAAGACTT
GGACCGGAAACGTCGGGAAGAACCTCAGTCAGTGGAACCAAATGTACAAC
AGCAGTCTCACGACCAACGTATCCTGTCCGAATACGCGCACAGGAAGCGA
CGAGAACCAGTGGGAACATATGGGGAAACAGCAAAGCGTTCAGACCCCTG
GCACCCAGAACGCAATGGACATTCAAACACCGGATACTCTGGCTATCTCG
AGCGCAATCCACGTGCTTCAAACGATGCTTATCACCCCAACCAAGACAAC
ATTTTTGAAGACAATGATGTCTTTGGCATCCATAATGCAGGCTATAGATT
CCCCGTGTATGGCTATGCAAAGAACCGTGGAAAGAGAGATAATCATGATA
TATTCTCAGGTTAGTGTGGCATATTGTATATTTCACATTTATGTCATACC
TGGTGGGCCGCGAAACGTTCGATACGGGTGTTCCGCATCGTGTGATAATT
TTCCGTTTCACACGAGGTTCTACTTTTATCACACGGGCTTTCATAGAATA
TTAAGAATGTTTTTCGAGTGCGCCGGATGCGCCGTTGTCGAAAATTCGAA
TGCCGGATTCGGAGGTTGGATTCAATGTTGTTACGGTTTTGTTTTTTTAC
GAGGACACAAAACTCTCAACTTTTCGCATTAAAATGTGTGATTTTTCGGG
TGGGTATGACATAAATAAGATACAACACGGTGTATTCCGGATCATCGTTC
GGGCCGGAACCTCGGGCGATACGGAGAACACCGCGTTGTATTCTATATAT
CCAATATCATGGGATTATGTACAGTGCATACTTCGCAACTATAAGAATGA
AAGAATCGTTTTTGTTACAAGGCCTCTATTTCTTAGTAATAAAAAGCTTC
TTCCCAAAATCTGAAAATCCTGTAAATTTCATATCAGGTTTCAATTGACG
ATGTTCCACTTGAGGCCGTAGAAGTTGTATATTGTAGGTAGTAAACCTTA
AGAGGAGTTAACACATAACACAACGTTCCAACAACATCTTAATATCAAAC
CTCCATGGAGCGAGTAGAATTGCAAATGTATATTCAAAATTGCGTATCAA
TTGGAACCAAAATGGCGGGGCTGATCTAGATCTATAGGATAGTGTTTTCA
GGACTTGGCTCCTGTACTATAAAGGATCAAGTTGAATGATACACGTATAT
Coding sequence (CDS) from alignment at Sc0000044:2051235..2053384- >transcript:BL96956_cuf7 ID=transcript:BL96956_cuf7|Name=transcript:BL96956_cuf7|organism=Branchiostoma lanceolatum|type=CDS|length=798bp|location=Sequence derived from alignment at Sc0000044:2051235..2053384- (Branchiostoma lanceolatum)
ATGTCCGCCCAGATCCCGAGATCCAAATCTTATCAGAACACTTGCAGCGA
GATCGCCGCACTGCTGGAGAAGAACGCATTCTACCCAAAGCTGCTGATCT
CAGTCANGAAGAAGAACGCATCCTACCCAAAGCTGCTGATCTCAGTCAGT
CAAAGATCGAAGACTTGGACCGGAAACGTCGGGAAGAACCTCAGTCAGTG
GAACCAAATGTACAACAGCAGTCTCACGACCAACGTATCCTGTCCGAATA
CGCGCACAGGAAGCGACGAGAACCAGTGGGAACATATGGGGAAACAGCAA
AGCGTTCAGACCCCTGGCACCCAGAACGCAATGGACATTCAAACACCGGA
TACTCTGGCTATCTCGAGCGCAATCCACGTGCTTCAAACGATGCTTATCA
CCCCAACCAAGACAACATTTTTGAAGACAATGATGTCTTTGGCATCCATA
ATGCAGGCTATAGATTCCCCGTGTATGGCTATGCAAAGAACCGTGGAAAG
AGAGATAATCATGATATATTCTCAGGTTAGTGTGGCATATTGTATATTTC
ACATTTATGTCATACCTGGTGGGCCGCGAAACGTTCGATACGGGTGTTCC
GCATCGTGTGATAATTTTCCGTTTCACACGAGGTTCTACTTTTATCACAC
GGGCTTTCATAGAATATTAAGAATGTTTTTCGAGTGCGCCGGATGCGCCG
TTGTCGAAAATTCGAATGCCGGATTCGGAGGTTGGATTCAATGTTGTTAC
GGTTTTGTTTTTTTACGAGGACACAAAACTCTCAACTTTTCGCATTAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000044 | genome | Sc0000044:2051235..2053384 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL96956_cuf7 |
| Biotype | protein_coding |
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