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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL96953_cuf2 >transcript:BL96953_cuf2-protein ID=transcript:BL96953_cuf2-protein|Name=transcript:BL96953_cuf2|organism=Branchiostoma lanceolatum|type=polypeptide|length=122bp
CPYGKTYQECGSSCGRTCRELADEDQLCRDECIQGCNCPPGMYEAPDGFC
VLKRNCPCYFEGKWLTAGVPFQPYGSNRDCHCLNGVVTCTSTVDEPETCP
EGQNYIDCSLPENEDTQGAACQ Run BLAST on NCBI mRNA from alignment at Sc0000044:2030590..2032532- Legend: five_prime_UTRexonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL96953_cuf2 ID=transcript:BL96953_cuf2|Name=transcript:BL96953_cuf2|organism=Branchiostoma lanceolatum|type=mRNA|length=1943bp|location=Sequence derived from alignment at Sc0000044:2030590..2032532- (Branchiostoma lanceolatum)
CCTGTCCATATGGCAAGACGTATCAGGAATGCGGCTCTTCATGTGGCCGC
ACTTGCCGAGAACTCGCTGATGAGGATCAGCTGTGTAGGGATGAATGTAT
CCAGGGCTGCAACTGTCCTCCAGGAATGTACGAGGCCCCGGACGGTTTTT
GTGTGCTGAAACGCAACTGCCCTTGCTACTTTGAGGGGAAGTGGTTGACT
GCAGGTGTACCATTCCAGCCCTACGGATCCAACAGAGATTGGTATTGTTA
CACATATTATCTTATTGTTAGCGTAAAAGTCACTATCAAACAAACTTTCG
TTTATTTACATTTGTTGAAATTGTGATTAAATGTAATAACTGTTATGCTT
GGCTGATATTGTTTCGTTGCCATATTTATGTGCCACTGATCAGTCACTAT
TTGCTCTTTTCGTTATTTAAGTTCTGATAGTTTTGTTTATATGGGCTTTT
CATATTTCATTTGTCAACATAAGTTCTGTTTTATTTCAATGTTCTGTAAT
CTTTGGTTGAAATTGATTTTGCTATATTTATTCGCCAATGATACTCTTAT
CTTTATTTCTATGTATATTACCTATATCTACACAGTACCTCATTTCTGTT
TCCACCTTTAGTTATTGTTTTGGATCCGTTTCTTATGTTACATTCCTGTA
CATTGTTTCCCTTGTTTTCTATTATATGTTGTTTCATTTTGTGCAATGCA
ATCAACAAAATAAAATAAAAACTCTTTTTTAGTTCCAGCCTGATGAAACT
GAAACATTGAACAAAAAATTAAAAACTATCTGGCACAAGACAGAAACTAT
TGGTTCATTTATAGACGTCTTGATTAAGACTTGCACAGTTGACTACCTGG
ATACTACTAAAACCTCTAGCTTTCTTCAGGTTGCAACTTGCAGTTTTTAA
AATTTGTTTTGATAATGAGAAAGGATCATAACAATATCATGCACTGATCT
CAGTGTTGATACATTGTGATGACGTCTGAAATTATGACCTCACAAAGAAA
TCTTTGAGGGTCCCAGGGTCGATTGCTGTGAGAGTAAAGGGGTGGGAAGA
ATTTGAATTTTTAACTCATCTACATTATATACTTCTTTTTTGTAATAGTC
ATTGTCTCAACGGCGTGGTGACCTGTACCAGTACTGTAGACGAGCCAGGT
AAGATGAAAACAGATTTGAAGAGTTGCCCTCTATTTCAGTAAACCAGTGC
AGTGAAATAGCGTACACGCTTTGTAATAGTCATTTAGAGTTCGCGGTCGT
TGGTATGGGCCGGGTCATAACAAAGGCTTAAACAATGCTACATACTGCTT
TCTCTGATCTGAGCATGAGAAAGAATACTGTAGTAGCCCTGAGTGGCTTA
TGTCTATAGAAATAGAGACGGACACTGCCCCTATATCACCAAAAGGTGTG
GGAGAGCTTTTACATAAAACTATTTCAGTGCATCAAATAGTGCCAACTTT
TGTTATTGACAAGGAATATTTTGGTTGTCCTAATGTTCTGCCAATTAAGT
GCTCATATTCAATGCGTATTCATACTTGTCGCCCTGAAACTCTAAGGATA
AATGAACAGCATCTGTTGGTGATCAACAGTTGTTAGTGCCACACTATCTT
ACATAGACGATGGGTTCTTTAACCTTCTTGAGGCAATTGCTTTAAATTTG
TCAATTCTTATTACGCACTTCTAAAGTTTTAAAACAGGTTGGTGTTCTAG
ACGGATGCCAAAGTCGGAGTGCATTTCTCCCTTGAACATTTCAGCTCCCT
TGGTCAGGTTCTCCGCCATAGTGGGATGAGTGAGTGTATGTTAAAGTGGG
GAATGTGTGGTAAACTAGTATACGTTTCCTGTTAATCTTCTTGTTTCCTT
CTCTCATGGTTTGCAGAGACTTGCCCTGAAGGTCAGAATTACATAGACTG
CAGCCTGCCGGAGAACGAAGACACCCAGGGGGCAGCCTGTCAG Coding sequence (CDS) from alignment at Sc0000044:2030590..2032532- >transcript:BL96953_cuf2 ID=transcript:BL96953_cuf2|Name=transcript:BL96953_cuf2|organism=Branchiostoma lanceolatum|type=CDS|length=1098bp|location=Sequence derived from alignment at Sc0000044:2030590..2032532- (Branchiostoma lanceolatum)
TGTCCATATGGCAAGACGTATCAGGAATGCGGCTCTTCATGTGGCCGCAC
TTGCCGAGAACTCGCTGATGAGGATCAGCTGTGTAGGGATGAATGTATCC
AGGGCTGCAACTGTCCTCCAGGAATGTACGAGGCCCCGGACGGTTTTTGT
GTGCTGAAACGCAACTGCCCTTGCTACTTTGAGGGGAAGTGGTTGACTGC
AGGTGTACCATTCCAGCCCTACGGATCCAACAGAGATTGTCATTGTCTCA
ACGGCGTGGTGACCTGTACCAGTACTGTAGACGAGCCAGAGACTTGCCCT
GAAGGTCAGAATTACATAGACTGCAGCCTGCCGGAGAACGAAGACACCCA
GGGGGCAGCCTGTCAGTGTCCATATGGCAAGACGTATCAGGAATGCGGCT
CTTCATGTGGCCGCACTTGCCGAGAACTCGCTGATGAGGATCAGCTGTGT
AGGGATGAATGTATCCAGGGCTGCAACTGTCCTCCAGGAATGTACGAGGC
CCCGGACGGTTTTTGTGTGCTGAAACGCAACTGCCCTTGCTACTTTGAGG
GGAAGTGGTTGACTGCAGGTGTACCATTCCAGCCCTACGGATCCAACAGA
GATTGTCATTGTCTCAACGGCGTGGTGACCTGTACCAGTACTGTAGACGA
GCCAGAGACTTGCCCTGAAGGTCAGAATTACATAGACTGCAGCCTGCCGG
AGAACGAAGACACCCAGGGGGCAGCCTGTCAGTGTCCATATGGCAAGACG
TATCAGGAATGCGGCTCTTCATGTGGCCGCACTTGCCGAGAACTCGCTGA
TGAGGATCAGCTGTGTAGGGATGAATGTATCCAGGGCTGCAACTGTCCTC
CAGGAATGTACGAGGCCCCGGACGGTTTTTGTGTGCTGAAACGCAACTGC
CCTTGCTACTTTGAGGGGAAGTGGTTGACTGCAGGTGTACCATTCCAGCC
CTACGGATCCAACAGAGATTGTCATTGTCTCAACGGCGTGGTGACCTGTA
CCAGTACTGTAGACGAGCCAGAGACTTGCCCTGAAGGTCAGAATTACATA
GACTGCAGCCTGCCGGAGAACGAAGACACCCAGGGGGCAGCCTGTCAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000044 | genome | Sc0000044:2030590..2032532 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL96953_cuf2 |
| Biotype | protein_coding |
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