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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL96951_cuf6 >transcript:BL96951_cuf6-protein ID=transcript:BL96951_cuf6-protein|Name=transcript:BL96951_cuf6|organism=Branchiostoma lanceolatum|type=polypeptide|length=110bp
MAGATLTTRSSRPFLVTAALFVLLQLTLSVEPATAQTTPLVTGAPDPNRE
LRSEILIVFELQAVWALIVMAVILWAESRDQWEVVKHGSSVGPLAGVVIS
VVVIALLVAP Run BLAST on NCBI mRNA from alignment at Sc0000044:1473470..1476208- Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL96951_cuf6 ID=transcript:BL96951_cuf6|Name=transcript:BL96951_cuf6|organism=Branchiostoma lanceolatum|type=mRNA|length=2739bp|location=Sequence derived from alignment at Sc0000044:1473470..1476208- (Branchiostoma lanceolatum)
GCAACAACGGCAACAAACTATCAATCCAAGCAGGGTGAAACATGATCCGA
CAACGACCTGACATGACCTTTGCACGGCTAATTGGACAGGTGCTCTGCTT
TGACCTGTGGGTCGTCTGACGCTCTGACAACAAGTCGCACACAGGTAGAA
GAACCTGCTGAACTACCGCGTTTTCTGTGAATCTGGACAACAGTCTACGT
AATTAGGGAGCAAAAATGGCCGGTGCAACACTGACTACACGTTCTTCCCG
GCCATTCCTTGTGACTGCGGCTCTTTTTGTCCTACTGCAGCTGACGCTTA
GTGTCGGTAAGTGTAACAACCTTATGTTTGCGCAGTCGCAATTTCTAAAT
GGTAGAATTTTCAGCTAAGCTAGGACAGAAAATTTTGTGCCAAGGATCAA
TGACAAGCCTTTTCTGCCATGAAACTGCTGAATCTTGCACGGCAATTCAA
CGACTCTCCAATGAATGCTGTTGGAAACCTGTCGTGTGATCCCCAGAACT
ATCGTACGATGGAACTAGTTGCCACCAATTATACTGTAGCGTAGTACTAG
TGCTGCGTGCCGGTACTGTGTACCGGTACTGTACCGTAGAAATTGATTAG
GTACAGGTCCAAAATACCGAATCATGAAGTACCGGTACTGTACCGATATA
AATTTACACCGACATGTGCTTATTTTGTTACTGATCTCCTAACCTCATGG
CCGCATGCAACACCAACAGCGTAACTAATATGCAACAGATCATTCAGGCA
GGCCGGGAGTTTTGGTAGCAAGGCCAAGGGAGTTTGGCGGTAGGAAAACT
AATATGTTCTTTGAATGAAGATACTAACAAGTTGTAAACAGTTTATTTAT
GTTTCTGTTAATATTGAAGAAGTTCAGAAAAAACACATGTAAATTTTTCA
AATTGTTCAGGTACAGGTACAGGTACAGACCTGTACCTAAACCTTTGTAC
CGGTACCTGTAGCTGATGTTACGTTTAGGTACGCAGCACCACTGTAGGGC
CATCTTCATTAGATACGCTGAGAAAGCACAGGACATGGTTAGCAAAATCA
TGAGCTTTGTAATGGACCCTAGTGAGTCACCATAATCCACTCTACCCCCC
CCCCCTTCCTTAATATGTTATTTAGTTGTTTAACCGGTTTAACCGCCCTT
TGGCCTAACCTCTAAACTGTGACGGTTCAAAATAAACAATAGTAGGTACA
ATGCTCCAGACTAGGGCATAGGGCATATCTTCTAATACCGCGATCGACCA
GAGGAGTTCGAATTCGTTCTGTTGCCTGTGTCTCGCACGACTTGGGCCCC
GGAAGTAGAACTGAATATTCGATGTTTTATTTTGATATTTTGATTTTGAT
ATAGCGATGGGCGAAGTTCTTATCGAGGACAAGTTGTGCTATCAACCGCG
TACAAATCAAAATGGGTCAAAAGCCGACTTGCAAGACATTGTGACGATGT
GTCCCAAGGTCGCACCTGGGGCACATGTAGTATTAAGGTCACATAAGTTA
GCACCGAATGGCAGACTGTCAATGCGATACAACCAATTATCAAAATGAAG
AATAACAATGAGCATATTTGTTTACAGAACCAGCAACAGCACAAACTACT
CCATTGGTGACGGGTGCGCCTGGTAAGGATGTCTCTGTTCAATAAGATTT
AGGACTACCCCTGGTCATGACTCATCCGTTTGGATGCTTGTAGGAGTACA
GGGTGGGGTAAACTATGTCATTCAAGGTACAAAGTATGTCATTCACTGGT
ACATAGATAACATTCTATTAGGCTTACCGATTTATCTAATACAACATTAT
ATAATAGTCTATCTTATACAATATGGTGAAGCAGTCTATCTTATACAATA
TGGTGTAGTAGTATGGGATGACAATGGTATTTTATAATCATTGGAGGAGT
TTCTTACGTCTAGACATTCTTTGATATATTTCCCAATGTATACCATGCAT
GGGTTGTCGCATGTCATTATGTACTTAAATTTGCTGTTCAAATCCATTGA
GATAAATCCTGGTAAATCCGACGATAGCACTGAGTATAGTGAATTACGTA
TATCGAAATATTTGGGACATCATATTTAAGAATGGACGGGACTGTTTCGA
TGTGGCTAGTGACTGGCGGTGGTTGCCTGTACCAGATTTTAGTACACACA
TGATGGCATTTGACATCTCCCTTGACCACACAGGGCTATTTCCCTTTCTG
AACAGTTTGACAAATTCTGGGCCAAATTGCTTTTATAATTAGTTGACAGA
CTTGTATGTTCTTTCCGTCGTTTCAGACCCCAATAGGGAGTTACGATCTG
AGATTCTGATCGTGTTCGAGCTTCAAGCTGTCTGGGCGCTGATCGTGATG
GCTGTCATACTGTGGGCAGAGTCAAGAGGCGAGTATCTTACAGGGAATTA
CGACGGGGAGAGTTTAAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG
TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG
TATCTGTGTGAGTGTCTGTACATATGTGTGTGCGTGTATGTGTGTATTTA
TGTTTGTGTGAGTGTGTTTTTATGTGTGTGTGTTTGAAAAGAACATTGCA
GAAAAGTTAAATACTCAAACTTTAATTCTGTCTTTCTTTCTTGCAGACCA
ATGGGAGGTGGTAAAACACGGCAGCAGTGTCGGTCCTCTGGCCGGAGTTG
TGATATCGGTGGTTGTGATCGCGTTACTAGTGGCTCCNN Coding sequence (CDS) from alignment at Sc0000044:1473470..1476208- >transcript:BL96951_cuf6 ID=transcript:BL96951_cuf6|Name=transcript:BL96951_cuf6|organism=Branchiostoma lanceolatum|type=CDS|length=1320bp|location=Sequence derived from alignment at Sc0000044:1473470..1476208- (Branchiostoma lanceolatum)
ATGGCCGGTGCAACACTGACTACACGTTCTTCCCGGCCATTCCTTGTGAC
TGCGGCTCTTTTTGTCCTACTGCAGCTGACGCTTAGTGTCGAACCAGCAA
CAGCACAAACTACTCCATTGGTGACGGGTGCGCCTGACCCCAATAGGGAG
TTACGATCTGAGATTCTGATCGTGTTCGAGCTTCAAGCTGTCTGGGCGCT
GATCGTGATGGCTGTCATACTGTGGGCAGAGTCAAGAGACCAATGGGAGG
TGGTAAAACACGGCAGCAGTGTCGGTCCTCTGGCCGGAGTTGTGATATCG
GTGGTTGTGATCGCGTTACTAGTGGCTCCNATGGCCGGTGCAACACTGAC
TACACGTTCTTCCCGGCCATTCCTTGTGACTGCGGCTCTTTTTGTCCTAC
TGCAGCTGACGCTTAGTGTCGAACCAGCAACAGCACAAACTACTCCATTG
GTGACGGGTGCGCCTGACCCCAATAGGGAGTTACGATCTGAGATTCTGAT
CGTGTTCGAGCTTCAAGCTGTCTGGGCGCTGATCGTGATGGCTGTCATAC
TGTGGGCAGAGTCAAGAGACCAATGGGAGGTGGTAAAACACGGCAGCAGT
GTCGGTCCTCTGGCCGGAGTTGTGATATCGGTGGTTGTGATCGCGTTACT
AGTGGCTCCNATGGCCGGTGCAACACTGACTACACGTTCTTCCCGGCCAT
TCCTTGTGACTGCGGCTCTTTTTGTCCTACTGCAGCTGACGCTTAGTGTC
GAACCAGCAACAGCACAAACTACTCCATTGGTGACGGGTGCGCCTGACCC
CAATAGGGAGTTACGATCTGAGATTCTGATCGTGTTCGAGCTTCAAGCTG
TCTGGGCGCTGATCGTGATGGCTGTCATACTGTGGGCAGAGTCAAGAGAC
CAATGGGAGGTGGTAAAACACGGCAGCAGTGTCGGTCCTCTGGCCGGAGT
TGTGATATCGGTGGTTGTGATCGCGTTACTAGTGGCTCCNATGGCCGGTG
CAACACTGACTACACGTTCTTCCCGGCCATTCCTTGTGACTGCGGCTCTT
TTTGTCCTACTGCAGCTGACGCTTAGTGTCGAACCAGCAACAGCACAAAC
TACTCCATTGGTGACGGGTGCGCCTGACCCCAATAGGGAGTTACGATCTG
AGATTCTGATCGTGTTCGAGCTTCAAGCTGTCTGGGCGCTGATCGTGATG
GCTGTCATACTGTGGGCAGAGTCAAGAGACCAATGGGAGGTGGTAAAACA
CGGCAGCAGTGTCGGTCCTCTGGCCGGAGTTGTGATATCGGTGGTTGTGA
TCGCGTTACTAGTGGCTCCN
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000044 | genome | Sc0000044:1473470..1476208 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL96951_cuf6 |
| Biotype | protein_coding |
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