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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL96949_cuf3 >transcript:BL96949_cuf3-protein ID=transcript:BL96949_cuf3-protein|Name=transcript:BL96949_cuf3|organism=Branchiostoma lanceolatum|type=polypeptide|length=306bp
LVPGEEDEDDDSARDKGFDICEEPTDIQCRLVGTDYVLGNGDTSADGLTT
CNLEFGAQCEYNCSNYEVRFECRYQMPECTTPGPTTTQPPTTTIPVPTTT
TPPPTTTTPPPTTTTPPPTTTTPPPTTTPPQTTTTPPPTTTTAPPTTTTT
PPTTTTAPHATTTAPPTTTTAPPTTTTAPPTTTTAPPTTTTAPPTTTTAS
ITTTTTPPTTTTPVPTTTPPVPTTTPPPTTTTPPPATTICEPVEVWSEWV
DTHCPPTECADENDTSIGESCYHYVTEPLEDKEAAQIVCQEGGGSLVSLS
SKDEYV Run BLAST on NCBI mRNA from alignment at Sc0000044:2119133..2120835- Legend: five_prime_UTRexonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL96949_cuf3 ID=transcript:BL96949_cuf3|Name=transcript:BL96949_cuf3|organism=Branchiostoma lanceolatum|type=mRNA|length=1703bp|location=Sequence derived from alignment at Sc0000044:2119133..2120835- (Branchiostoma lanceolatum)
TCTTAGTGCCAGGAGAAGAGGACGAAGATGACGATTCAGCACGAGACAAA
GGATTTGACATCTGTGAGGAGCCAACGGACATTCAGTGCCGGCTCGTAGG
AACAGATTACGTGCTGGGGAATGGAGATACCTCAGCCGATGGGCTCACTA
CATGTAACTTAGAATTTGGTGCTCAATGTGAATACAAGTAAGTAAGTTCC
ATCTACAACCTTATTAGTCTACGGACGATATTCTATATGTACCTTATTTT
TCCCAACGATGCCCGCTGTTGTTATGGATAGATTAAAGATAGCTTAATGT
CATTGGTTAAAATTAAACAACTTGGCACTAGCACAGAATAAAGACACGCG
GTTTGTAGCAAAAAAGAAATGAAAAATACCCTTCGAAGAAATTTGTTTTT
ATCCTCAGCCATGATGGCCATATTTTGATATGATTGTACACAAACAAATA
CACAAACAGCTAGTTAAGTCTTTTACACCTAAAAATGACCTAATAATCAT
TCTCTTTTCAACTACGTTTTATGTGTAGCTGTTCAAACTATGAAGTACGG
TTCGAATGTCGCTATCAAATGCCAGAGTGCACAACGCCTGGACCAACCAC
AACGCAACCTCCAACGACTACTATACCAGTACCAACAACTACGACACCAC
CACCCACAACTACTACACCACCACCTACAACTACTACACCACCGCCCACA
ACTACTACGCCACCACCCACAACTACACCCCCTCAAACAACCACTACACC
ACCACCAACGACCACTACAGCGCCACCTACAACCACTACAACGCCACCTA
CAACAACTACAGCGCCACATGCAACAACTACAGCGCCACCTACAACAACT
ACAGCGCCACCTACAACAACTACAGCGCCACCTACAACAACTACAGCGCC
ACCTACAACAACTACAGCGCCACCTACAACAACTACAGCGTCAATAACAA
CCACTACAACGCCACCTACCACAACTACACCAGTACCAACCACTACGCCA
CCAGTGCCAACTACTACACCACCACCCACCACAACAACACCACCTCCAGC
AACCACAATATGTGAACCAGTAGAAGTATGGTCTGAATGGGTTGATACAC
ACTGTCCTCCTACAGGTAAATTGGTGTTGACAATACCCTTGACATATCCT
TGTCTTGTCTGCATTTTTTACCCAATCTATTTCATTGATTTTATTCATGA
ATTCGGTCATTGGCCTTTAGCTTATTCTACGCCGCTGTCGCATAGTTACT
TCCGTATTCGTTGCATTTTGCTCCAGTATAACGCCTTTAATTGAGGAATA
CCCCCAACCCTTACACATCCGGGACCCATATACAGGCACTGTAATATGCA
ACCTATATTATCTGTAAACGTTTAAACTATGCTTTAGTGCATATCTAATT
TGCATAAGTATCATTTTATGATAGCAAATCTTTGAATAAGTATTGCAAGT
AATTTATTGTAGAATATATATTTCTGCACTTAGACAAAATTGCAAATGGG
GAATTCAAGGTTGGTACGACAGAAGACGACAATGATTTTTCGTTTCCTCC
TGTTCAGAGTGCGCGGATGAAAATGATACGTCTATTGGAGAATCCTGCTA
TCATTATGTAACGGAACCACTGGAGGACAAGGAGGCCGCACAAATAGTCT
GCCAAGAAGGTGGTGGCAGCTTGGTGTCTTTGTCTTCCAAAGATGAGTAT
GTG Coding sequence (CDS) from alignment at Sc0000044:2119133..2120835- >transcript:BL96949_cuf3 ID=transcript:BL96949_cuf3|Name=transcript:BL96949_cuf3|organism=Branchiostoma lanceolatum|type=CDS|length=2754bp|location=Sequence derived from alignment at Sc0000044:2119133..2120835- (Branchiostoma lanceolatum)
TTAGTGCCAGGAGAAGAGGACGAAGATGACGATTCAGCACGAGACAAAGG
ATTTGACATCTGTGAGGAGCCAACGGACATTCAGTGCCGGCTCGTAGGAA
CAGATTACGTGCTGGGGAATGGAGATACCTCAGCCGATGGGCTCACTACA
TGTAACTTAGAATTTGGTGCTCAATGTGAATACAACTGTTCAAACTATGA
AGTACGGTTCGAATGTCGCTATCAAATGCCAGAGTGCACAACGCCTGGAC
CAACCACAACGCAACCTCCAACGACTACTATACCAGTACCAACAACTACG
ACACCACCACCCACAACTACTACACCACCACCTACAACTACTACACCACC
GCCCACAACTACTACGCCACCACCCACAACTACACCCCCTCAAACAACCA
CTACACCACCACCAACGACCACTACAGCGCCACCTACAACCACTACAACG
CCACCTACAACAACTACAGCGCCACATGCAACAACTACAGCGCCACCTAC
AACAACTACAGCGCCACCTACAACAACTACAGCGCCACCTACAACAACTA
CAGCGCCACCTACAACAACTACAGCGCCACCTACAACAACTACAGCGTCA
ATAACAACCACTACAACGCCACCTACCACAACTACACCAGTACCAACCAC
TACGCCACCAGTGCCAACTACTACACCACCACCCACCACAACAACACCAC
CTCCAGCAACCACAATATGTGAACCAGTAGAAGTATGGTCTGAATGGGTT
GATACACACTGTCCTCCTACAGAGTGCGCGGATGAAAATGATACGTCTAT
TGGAGAATCCTGCTATCATTATGTAACGGAACCACTGGAGGACAAGGAGG
CCGCACAAATAGTCTGCCAAGAAGGTGGTGGCAGCTTGGTGTCTTTGTCT
TCCAAAGATGAGTATGTGTTAGTGCCAGGAGAAGAGGACGAAGATGACGA
TTCAGCACGAGACAAAGGATTTGACATCTGTGAGGAGCCAACGGACATTC
AGTGCCGGCTCGTAGGAACAGATTACGTGCTGGGGAATGGAGATACCTCA
GCCGATGGGCTCACTACATGTAACTTAGAATTTGGTGCTCAATGTGAATA
CAACTGTTCAAACTATGAAGTACGGTTCGAATGTCGCTATCAAATGCCAG
AGTGCACAACGCCTGGACCAACCACAACGCAACCTCCAACGACTACTATA
CCAGTACCAACAACTACGACACCACCACCCACAACTACTACACCACCACC
TACAACTACTACACCACCGCCCACAACTACTACGCCACCACCCACAACTA
CACCCCCTCAAACAACCACTACACCACCACCAACGACCACTACAGCGCCA
CCTACAACCACTACAACGCCACCTACAACAACTACAGCGCCACATGCAAC
AACTACAGCGCCACCTACAACAACTACAGCGCCACCTACAACAACTACAG
CGCCACCTACAACAACTACAGCGCCACCTACAACAACTACAGCGCCACCT
ACAACAACTACAGCGTCAATAACAACCACTACAACGCCACCTACCACAAC
TACACCAGTACCAACCACTACGCCACCAGTGCCAACTACTACACCACCAC
CCACCACAACAACACCACCTCCAGCAACCACAATATGTGAACCAGTAGAA
GTATGGTCTGAATGGGTTGATACACACTGTCCTCCTACAGAGTGCGCGGA
TGAAAATGATACGTCTATTGGAGAATCCTGCTATCATTATGTAACGGAAC
CACTGGAGGACAAGGAGGCCGCACAAATAGTCTGCCAAGAAGGTGGTGGC
AGCTTGGTGTCTTTGTCTTCCAAAGATGAGTATGTGTTAGTGCCAGGAGA
AGAGGACGAAGATGACGATTCAGCACGAGACAAAGGATTTGACATCTGTG
AGGAGCCAACGGACATTCAGTGCCGGCTCGTAGGAACAGATTACGTGCTG
GGGAATGGAGATACCTCAGCCGATGGGCTCACTACATGTAACTTAGAATT
TGGTGCTCAATGTGAATACAACTGTTCAAACTATGAAGTACGGTTCGAAT
GTCGCTATCAAATGCCAGAGTGCACAACGCCTGGACCAACCACAACGCAA
CCTCCAACGACTACTATACCAGTACCAACAACTACGACACCACCACCCAC
AACTACTACACCACCACCTACAACTACTACACCACCGCCCACAACTACTA
CGCCACCACCCACAACTACACCCCCTCAAACAACCACTACACCACCACCA
ACGACCACTACAGCGCCACCTACAACCACTACAACGCCACCTACAACAAC
TACAGCGCCACATGCAACAACTACAGCGCCACCTACAACAACTACAGCGC
CACCTACAACAACTACAGCGCCACCTACAACAACTACAGCGCCACCTACA
ACAACTACAGCGCCACCTACAACAACTACAGCGTCAATAACAACCACTAC
AACGCCACCTACCACAACTACACCAGTACCAACCACTACGCCACCAGTGC
CAACTACTACACCACCACCCACCACAACAACACCACCTCCAGCAACCACA
ATATGTGAACCAGTAGAAGTATGGTCTGAATGGGTTGATACACACTGTCC
TCCTACAGAGTGCGCGGATGAAAATGATACGTCTATTGGAGAATCCTGCT
ATCATTATGTAACGGAACCACTGGAGGACAAGGAGGCCGCACAAATAGTC
TGCCAAGAAGGTGGTGGCAGCTTGGTGTCTTTGTCTTCCAAAGATGAGTA
TGTG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000044 | genome | Sc0000044:2119133..2120835 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL96949_cuf3 |
| Biotype | protein_coding |
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