|
|
Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL96944_cuf15 >transcript:BL96944_cuf15-protein ID=transcript:BL96944_cuf15-protein|Name=transcript:BL96944_cuf15|organism=Branchiostoma lanceolatum|type=polypeptide|length=122bp
GSIQCVAGIPSCDVGDQWSLQDGILGCHPLTTPCDMKADVVFVVESSSSV
PQAEFDKVRSFLKHVVEKVTIGADATQIAVVSYGSYPALQFYLNEHDNLF
ELKTGINNLRHIGLGTATGTAL Run BLAST on NCBI mRNA from alignment at Sc0000044:1012676..1014529+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL96944_cuf15 ID=transcript:BL96944_cuf15|Name=transcript:BL96944_cuf15|organism=Branchiostoma lanceolatum|type=mRNA|length=1854bp|location=Sequence derived from alignment at Sc0000044:1012676..1014529+ (Branchiostoma lanceolatum)
GAGGATCCATCCAGTGCGTGGCCGGGATTCCGTCATGTGATGTCGGCGAC
CAGTGGTCTCTACAGGACGGCATTCTGGGATGTCATCCACGTTAGTATAG
GCGAAAGTCATGACTACTTTAAAAAAAAAAATCAACATTCAGAGGACATA
CTGTAACCTGTATCTTTGTTACATCTTCTTACTCTTTCGTCCTCCCTTAA
GGTCTCAATGAAAATCGGCCTTCAGACAGATTTGAGTTTCTTGTTGATAA
ACAAAGTTTTAAAAAAAATCAATGAACGGGTTTCTTCAAAAACTGAAATT
CAAATATTGTACAACTCACTGTGACCCGATATAAGCGGACCTAGATGTCA
CAATTACATAGCATGATCTGTTATTTTCCCCAAATGAACACACCCTGTGA
CATGAAGGTGGATGATGTTTTTGGGAATTCTTCCTTTGTGAGAATAGCTA
GTCGGTCGTGCCTACCCATTTCTGTACTGTCTATTTATTTTCAAAAGTCA
CGGTACACTACATTGACTCTCGGTGCAGCATAGCTGATGTTTGAGAGTGA
ACGGTTAGGGACAGACAAATACATACATATACTGTTAACGGTACCTTTGA
TGATAACGTGACATCATTGGCGTTATTTCTCCCCAGTGACCCCCCTTTGT
GACATGGAAGCGGACGTGGTGTTTGAAGTGAAAAGTTCCTCCCGTGTGAG
AATAACTAACTTGCCATTGATGTATATGCATGTCTGTAAGTAGCGTTACC
AGTTCTGATAATGTTCATCCCTCCCCAGTGACTACCCCGTGTGACATGAA
GGCTGACGTGGTGTTTGTTGTGGAAAGTTCCTCCAGTGTTCCACAGGCGG
AGTTTGACAAGGTTCGCTCCTTCCTCAAACATGTGGTGGAGAAGGTCACC
ATCGGAGCAGACGCTACTCAGTAAGGTTTTATTTAAAGTAGTTTTTAAAG
AAGACATTTATGTTAATTGTGCTAATTATCGTCGCAGTCTTTTTGTACTG
GAGGACCAGCTGCATATATTGTTAACCTGCACTAATGCCTTGAGTGAAGC
TGAATGTCTGGTAAAAGTAGTCGCTTTCTGAAGCTTGATGCTAAAATTTC
CTAGCAAAAAGATCAACATGTGTCTATACTCATTGCGATTGACAGCATTT
TTTTGTATAGTTTGTGGTGGCTTGTCAAGATTGTCATTAAAAATCTTTCA
AAGTACAATAGCTGTATTTTTTAAGCAAGTCGTCCATATTTAGCTTGATC
GCGATCGGTACTATCAAAATCTTTCAAAAAGGCCGACACATGTATGTGCT
TCATTAATTAAATAGACGGAGAGAAAATTTGATTTTTCAGATGTTGAATA
TCTCAACGTTGTGAAAAAAGAACAAACCATAACAAAACTACCATCTTTAC
GTTCAGGATCGCCGTGGTAAGCTACGGCAGCTACCCGGCCCTGCAGTTCT
ACCTGAACGAGCACGACAATCTGTTCGAACTGAAGACCGGCATCAACAAC
CTGCGCCACATCGGACTCGGCACGGCCACAGGCACCGCGCTAGGCTTCGT
CGCGGACGGCGTCTTTAGCGAGGCCCACGGCGCACGCCCAGGTGTGCCTA
AGGTAAGGTCTTCTGCTTATTCAACTGTACTAACCTTAACCCTAGCATCA
ACACCCTGCGGCACATCGGGCTGGGCACGGCTACCGGCACCGCGCTCGGC
TTCGTCGCGGACGGCGTCCTTAGTGAGGCCCACGGCGCACGCCCGGGTGT
TCCCAAGGTAAGGTCTTCTGCTTATTCAACTGTACTAACCATAACCCTAG
CATCAAAAACCTGCGGCACATCGGGCTGGGCACGGCCACCGGCACCGCGC
TAGG Coding sequence (CDS) from alignment at Sc0000044:1012676..1014529+ >transcript:BL96944_cuf15 ID=transcript:BL96944_cuf15|Name=transcript:BL96944_cuf15|organism=Branchiostoma lanceolatum|type=CDS|length=1464bp|location=Sequence derived from alignment at Sc0000044:1012676..1014529+ (Branchiostoma lanceolatum)
GGATCCATCCAGTGCGTGGCCGGGATTCCGTCATGTGATGTCGGCGACCA
GTGGTCTCTACAGGACGGCATTCTGGGATGTCATCCACTGACTACCCCGT
GTGACATGAAGGCTGACGTGGTGTTTGTTGTGGAAAGTTCCTCCAGTGTT
CCACAGGCGGAGTTTGACAAGGTTCGCTCCTTCCTCAAACATGTGGTGGA
GAAGGTCACCATCGGAGCAGACGCTACTCAGATCGCCGTGGTAAGCTACG
GCAGCTACCCGGCCCTGCAGTTCTACCTGAACGAGCACGACAATCTGTTC
GAACTGAAGACCGGCATCAACAACCTGCGCCACATCGGGCTGGGCACGGC
CACCGGCACCGCGCTAGGATCCATCCAGTGCGTGGCCGGGATTCCGTCAT
GTGATGTCGGCGACCAGTGGTCTCTACAGGACGGCATTCTGGGATGTCAT
CCACTGACTACCCCGTGTGACATGAAGGCTGACGTGGTGTTTGTTGTGGA
AAGTTCCTCCAGTGTTCCACAGGCGGAGTTTGACAAGGTTCGCTCCTTCC
TCAAACATGTGGTGGAGAAGGTCACCATCGGAGCAGACGCTACTCAGATC
GCCGTGGTAAGCTACGGCAGCTACCCGGCCCTGCAGTTCTACCTGAACGA
GCACGACAATCTGTTCGAACTGAAGACCGGCATCAACAACCTGCGCCACA
TCGGGCTGGGCACGGCCACCGGCACCGCGCTAGGATCCATCCAGTGCGTG
GCCGGGATTCCGTCATGTGATGTCGGCGACCAGTGGTCTCTACAGGACGG
CATTCTGGGATGTCATCCACTGACTACCCCGTGTGACATGAAGGCTGACG
TGGTGTTTGTTGTGGAAAGTTCCTCCAGTGTTCCACAGGCGGAGTTTGAC
AAGGTTCGCTCCTTCCTCAAACATGTGGTGGAGAAGGTCACCATCGGAGC
AGACGCTACTCAGATCGCCGTGGTAAGCTACGGCAGCTACCCGGCCCTGC
AGTTCTACCTGAACGAGCACGACAATCTGTTCGAACTGAAGACCGGCATC
AACAACCTGCGCCACATCGGGCTGGGCACGGCCACCGGCACCGCGCTAGG
ATCCATCCAGTGCGTGGCCGGGATTCCGTCATGTGATGTCGGCGACCAGT
GGTCTCTACAGGACGGCATTCTGGGATGTCATCCACTGACTACCCCGTGT
GACATGAAGGCTGACGTGGTGTTTGTTGTGGAAAGTTCCTCCAGTGTTCC
ACAGGCGGAGTTTGACAAGGTTCGCTCCTTCCTCAAACATGTGGTGGAGA
AGGTCACCATCGGAGCAGACGCTACTCAGATCGCCGTGGTAAGCTACGGC
AGCTACCCGGCCCTGCAGTTCTACCTGAACGAGCACGACAATCTGTTCGA
ACTGAAGACCGGCATCAACAACCTGCGCCACATCGGGCTGGGCACGGCCA
CCGGCACCGCGCTA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000044 | genome | Sc0000044:1012676..1014529 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL96944_cuf15 |
| Biotype | protein_coding |
|
