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transcript:BL96939_cuf3 (mRNA) - B. lanceolatum

Overview
Nametranscript:BL96939_cuf3
Unique Nametranscript:BL96939_cuf3
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

protein sequence of transcript:BL96939_cuf3

>transcript:BL96939_cuf3-protein ID=transcript:BL96939_cuf3-protein|Name=transcript:BL96939_cuf3|organism=Branchiostoma lanceolatum|type=polypeptide|length=622bp
STTPVRQTGSDQAVHWFSVSRKIVAILTGYIQAKGSDMAHHIITVVLAAL
LTLLEVEAVADVTTPAGRLVGLELDVLGTTVHAFLGIPFAQPPVGERRFR
RAEPMEPWDGIYNARRRPNACSQNREVVNDESNLWGLNTPKSEDCLYLNV
WQPTPVPTGAAVLVWIYGGAFEWGSSSIPAYDGRYLAATEGVLVVSFNYR
VSGLGFLYAGTEDAPGNVGLTDQVLALRWVQDNVAAFGGDPARVTLFGES
AGGISIGYHLISPGSRDLFSRAILQSGTALNPWGYNSEADAYEKTVIFAD
HLGCPAEKGSAEMLACLREKDAQQLVDTSVVGYAAIIAVVDGSFLPESPP
VAYQSGAFKSADLLLGSNEDEGAFFLISNQYPGFSEDSESLITKEQFLEC
IRYYYPPLNEFAVDAVAFQYTDWERLDQDTMYRDAMDDLYGDNSFVCPDV
NTGRAHLRHGATPYMYRFAHRPSNSPEPAWVGAVHADEVPFVFGLPLDPV
YGFTEEEKDLARRMMRHWANFARTGNPNNNDEAVWSAFNATDGGYMVLDT
SEPRMLTGPSTENCAFWDNYLKPLWNKTEALMNDVPCATGSGVPQYNRPG
IVGRSLTACVLAVVLHLVTVYC
Run BLAST on NCBI

mRNA from alignment at Sc0000307:283449..288944-

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>transcript:BL96939_cuf3 ID=transcript:BL96939_cuf3|Name=transcript:BL96939_cuf3|organism=Branchiostoma lanceolatum|type=mRNA|length=5496bp|location=Sequence derived from alignment at Sc0000307:283449..288944- (Branchiostoma lanceolatum)
CGAGCACCACTCCCGTTCGGCAAACAGGTAGTGACCAGGCAGTGCACTGG TTTAGTGTTTCCAGAAAGATTGTCGCAATTCTAACTGGATATATTCAGGT ATGTAAATAACTTAAGATGTGGCTCTCTGGCTATTTCATTGCTGTATATA TTAAGCACGGGGTACAATGCCAATACGGGGTACAAGGCTGGCAAACACTA AGCGGTGGTAGGTCGTCCAATTTTTTTTCTTCTGATATCCTTCAGATTGG TCAGTGTGCAGTCTAACCTAGCCTATCAGAGAATTTCATGTTCCTCCGAA ACTCAAAATTATTGTCATGTCATAAAATGTCGTCAAATGCGGCGTTTGGC GATTGTTTGTTCACCTTAAAACCTTCGTTGTGTGATGCCATTCTACAATT GCGGTCGATCTATCTCGACTTTATTTGAAGGCATCATGATCAAGATAATG TTGACTTCAAATGACCCTGAGATACTTTGCCACATGATACGTTACGTTGA GTTGCACACATACCTCCGTGAGGGACGCTAGAGGAAGAAATTCTCTACAA ACTACTTTGTGCGCTGGTCGGCTCCGGAATTTTGATGACGTAGGCTGTGA CCGCGTGATAAGACCACGTAGTCAATTTTTAATCGAATGAATGAATGAAT GAATGTTTTATTTTCGTGTCCTGCGACTCAATAAAGTCGCCCAGCCCATA CGGACTTATAGGACACCAATTGAATACATAGATTTGACATAGGAGTGTTG GTAGAGGTACAGTAGTAAATAATAATAATCAGAAATAATGATAGCAGTAA TGATTAACACAAAATAATATGAGCATGATATAATGGCAACACAAAATGGA CACACCTGGTACATTGATTCAAAACAATTCAAATCTAAAGATAGCAAGTG GTAAATGAACATAACATATTCTTTCAGTACTCTTTATTTCAGACAACAAT ATCCATGTGTCACTCAAAGCCTAGTTAGCGTGAGCTTTGATGTCAATTTG GCCTCATTGAGGCTCTACATTTGCTTGACATTGATCTTCAAGCCGTGTAG ACTGTCGCCATATCGCATGGTGCCAATAATTTTTAGAATTCGCCCTTAGA CCCTTTACGCCAGACGACGACCATGCACTGAGCGGCTGTACAGCGACCAA ATTGGATTTGTTTGACCCTTGATTTAATTTGATGGAATATGATGCAATAT ATAAAACTACGGTCAAGAATCGATGGGGTCAAAAGCCAGTCGGGTCAAAA GCTACCCAGAACTTGAATCCAGCTGGGGGCCAGTTGGGGAGCAGCTTGTA TTTCATGGCGATCGCAGTCAATGCCATCAGAACAGCTGACCGGGTGTGTC TGCCGAAGTGTTGCCTGAAGTGCCGGGCGAAGACGTTCATGGTTGATTCA TGTTATTCGTGGGTTTGCACTACTGTTACATTGTGAGATATTTGCTAGCC CCCTGTACTGTCGGAATGTTCGCATTCAATACATTTGGGTACAACGAATC TAAAAGCTCTAAACCTTTCCGTAATCGCTGTTTGTTTACCATGCCTTATG TCGTCATCATTTTCCCCTGCATCTAGGCAAAGGGATCCGACATGGCTCAT CACATCATTACAGTAGTCCTTGCTGCGCTGTTGACCTTACTAGAAGTAGA AGCCGTGGCTGATGTGACGACGCCGGCAGGACGACTTGTCGGGCTGGAGT TGGACGTGCTCGGGACGACGGTTCACGCCTTCCTGGGAATCCCGTTCGCA CAGCCGCCAGTCGGAGAACGGCGGTTCAGACGGGCCGAACCCATGGAGCC ATGGGACGGGATATACAACGCAAGAAGGTCATGTTGAAGTTCCTGCCGTT GCTATTCTTGTCGTATCAAAGACTATCTGTGATTTGAAGTTCGAATATCT GTTTGAATATTGAATATTAGACATTTAACCTCCTTGAACAAAGTGTATCC ATTCATATTCACACATTATTGATCTGTTCTCTCAGTAAAAACAACGTATA ATGGACACGACACGTCGAAATCAGAAGGTTTTTTTTCCGTTCTAGACGTT TTCTCAATGCGCGTTGTTTTGTTCTTCAATGCCACAACAGGAGGCCCAAT GCATGCAGCCAGAACAGAGAAGTAGTGAATGATGAATCCAACCTGTGGGG ATTGAATACGCCGAAGAGCGAGGACTGTCTGTACCTGAACGTGTGGCAGC CAACCCCCGTCCCTACTGGAGCCGCCGTGCTGGTCTGGATTTACGGGGGC GCCTTCGAGTGGTATGTTGTAAATATCTAGGACACAGACTTGTTTGGAAA GACGGTTTAACAGACACAACTTTATCTTTGTGACTACCAGTAGAGACGGT GTTCGACTTCTTGATATCATTTTAAAAACCGGAATGGGCGATACCCAGGA CATTATCTTTAACCTTCTCCAAGCTGCCCAACTCTGTAACCAATACAGAA TGGACCGATCCAGTTCGAACGCTAAAAGCCCCGCCTCCTGTTCTATTTCG AATAGTCCGTCAAAAACAGCTCTTGACGGACAAAAACGGCCGTGCGCGCT TGGCTGTCGAATATGCAGACTATCTTCTGTTGAGCTTTTTTGGCTCTAAA CCCCTTCAGACCAGACCAAAAAAAAATGCTATGCCTTCATTGTGGGCGGC TGTATCCACTGAGTATGGTTGTTTGAGGAGGGGGTAGATGTTGTTACGAC GAGAGCGTAATATTTTCGGTCAATGTGGAAGCGGACTGCGTCGCATATCA TTACCTTGTTGGTGACAATCAGTGCCCGATTTTTGACAAGCAGCCGTTGC ACGTGTAAAACAGGGTACGTATATCTGTGACAGGGTTCCCACTGTGTTGA CTGCATGAATTGCAGCTGCATGTCTTTTAGTAATTAAATATCAAAATGCA ATTCTTTTACTTACCGTGTCGCATTCATATTAATCAGTTTCATAGACAAG TACAGAAGAGGCGGAACTCTGTACTCGCGGACTTCGTAATAGTTGGAAAT GTGTTACAAGCTCCCTCCCCATGAGTGCCCGAGCCATTTTCTGTTTCATT TGGTTTTTTCCTGAGCATACATGCAGCCAATGTAGTGGAAAGCCTGTGAC AGATGTACATACCCTGTTTAACGCGTGTCATTTCTGTCCAACTAGCGCTG TTCTTGACGGAGGTGTTCCAAATAGAACAGGGGGTTCTATATGTTCGATA TGGTGTTCGATGGATCGGTCCATTGGGTGCCAAACAGCTACTTCAGTGTT TAAAGGTTAACAAAGGAGATATCAAGTGATTCTGATACTTTCTTATAATT GTTCAAAAGATGTGGTTTAATTGCTATATGATCTTTTTACATGTACGGAT TTTGTTCTCCTCCACCATCTTATATCAGGGGATCCTCGTCAATTCCCGCA TACGACGGAAGGTACCTAGCGGCCACAGAAGGAGTTCTCGTGGTGTCCTT CAACTACCGGGTCAGTGGGCTAGGATTCCTCTACGCCGGCACCGAGGACG CGCCGGGCAACGTTGGTCTCACAGACCAGGTCCTGGCGCTGAGGTGGGTT CAGGACAACGTCGCGGCGTTTGGAGGTGACCCGGCAAGGGTGACTCTATT TGGCGAAAGCGCCGGTGGAATCAGTATCGGGTACCACCTGATATCTCCCG GCAGCAGGGACCTCTTCAGCCGCGCGATACTGCAGAGTGGGACCGCTCTA AATCCCTGGGGGTACAACTCTGAGGCTGATGCCTACGAGAAAACAGTGAT CTTTGCCGACCATTTGGGATGTCCAGCAGAGAAAGGTTCAGCCGAAATGC TGGCCTGTCTCCGGGAAAAGGACGCACAACAACTTGTTGATACTTCTGTC GTGGGATACGCAGCAATCATTGCTGTTGTGGACGGCAGTTTCCTACCGGA AAGCCCACCAGTGGCCTATCAGAGTGGAGCGTTCAAAAGCGCAGACCTCC TGCTCGGTTCTAATGAAGACGAAGGTGCCTTCTTCCTCATTAGCAACCAA TATCCTGGTTTTAGCGAGGACTCGGAAAGCCTGATCACCAAGGAGCAGTT TCTAGAGTGTATTCGCTACTATTATCCACCATTAAATGAGTTCGCTGTTG ATGCCGTCGCCTTTCAGTACACAGATTGGGAGCGTCTAGACCAAGATACC ATGTACCGCGACGCGATGGACGATCTTTACGGTGATAACTCCTTCGTCTG CCCTGACGTCAACACTGGTCGGGCCCATCTAAGGCATGGAGCAACGCCCT ACATGTACCGGTTTGCCCACCGCCCCTCGAACTCCCCCGAACCGGCCTGG GTGGGAGCGGTCCACGCCGATGAGGTGCCGTTCGTGTTCGGCCTGCCTCT GGATCCTGTCTACGGGTTCACCGAGGAGGAGAAAGACCTGGCTCGCAGGA TGATGCGGCACTGGGCGAACTTTGCCAGAACAGGGTATGTCATTTCTGTG CAATCTTCTGCAATCTCTGATATTGGATGATACCGGCATAGTTTCTTAAG CCACTAGACGGCGATCGCTGAGCGACCGTACATTATTGGAATAAGATGCA AGATGTAAAAGTATGATTTAAAAGACAACAAAATATACAAAACGTCCAAA AATTCGCAGCCTCTGGTGGAAAGGCCGTGTCTCATGTCACATTTCCAAAC CGTGAAATTTTGCGTGAACGAAAATTATACAATTCATATTAAGTTTATAT AAAAATGGTGCTCATGATTAATTTTTGCAACTTTTCTGTGTTTTGTTGTC TTTTATATCATACTTGTCGTTCACGCAAACTGCCCGGCCGGGCCCCGCGT TGGGAATTATGACCTAAGCATTATTCGGGTATGTTATCATGTTTGCAACT CTATTTCAATATGCAACATTGACGTTTCCTCAGGAATCCAAACAACAACG ACGAGGCTGTTTGGAGCGCCTTTAACGCGACCGATGGAGGGTACATGGTG CTGGACACGTCTGAGCCCCGGATGTTGACCGGCCCAAGCACAGAAAACTG TGCTTTCTGGGACAACTACTTAAAGCCCCTTTGGAACAAGACAGGTGAGT TGATTCTATTCACGGATAGTTGCTAGACTTTCATACGAACCCTTGTAAGA GACGGACTCTTAGGTCTCTGGAATACTGTTGCTCGAATTCTAGGTAACTA GTTCTACTAGATTGTATAAATATAACATTACGAAACAATCACAAGTGATG AATTTACTATTGGAGTAAACTGTTTTGGATTTTCTGTTTAGTTCTGTTTG TATATAATTTAGGCGGATTAATTTTCGCATTGAATATTTCCTCGCAGAGG CTTTAATGAATGATGTCCCGTGTGCCACCGGTTCAGGAGTGCCACAATAC AACCGGCCAGGGATCGTGGGGAGGAGTTTGACAGCTTGCGTACTGGCGGT CGTCTTGCACCTTGTCACTGTGTACTGTTAGTTTCTTATCACGTTGTAGT AACATGATGGAGCCAACGACCTCATCAATAAAATGTCTGTTTGACC

Coding sequence (CDS) from alignment at Sc0000307:283449..288944-

>transcript:BL96939_cuf3 ID=transcript:BL96939_cuf3|Name=transcript:BL96939_cuf3|organism=Branchiostoma lanceolatum|type=CDS|length=11214bp|location=Sequence derived from alignment at Sc0000307:283449..288944- (Branchiostoma lanceolatum)
AGCACCACTCCCGTTCGGCAAACAGGTAGTGACCAGGCAGTGCACTGGTT
TAGTGTTTCCAGAAAGATTGTCGCAATTCTAACTGGATATATTCAGGCAA
AGGGATCCGACATGGCTCATCACATCATTACAGTAGTCCTTGCTGCGCTG
TTGACCTTACTAGAAGTAGAAGCCGTGGCTGATGTGACGACGCCGGCAGG
ACGACTTGTCGGGCTGGAGTTGGACGTGCTCGGGACGACGGTTCACGCCT
TCCTGGGAATCCCGTTCGCACAGCCGCCAGTCGGAGAACGGCGGTTCAGA
CGGGCCGAACCCATGGAGCCATGGGACGGGATATACAACGCAAGAAGGAG
GCCCAATGCATGCAGCCAGAACAGAGAAGTAGTGAATGATGAATCCAACC
TGTGGGGATTGAATACGCCGAAGAGCGAGGACTGTCTGTACCTGAACGTG
TGGCAGCCAACCCCCGTCCCTACTGGAGCCGCCGTGCTGGTCTGGATTTA
CGGGGGCGCCTTCGAGTGGGGATCCTCGTCAATTCCCGCATACGACGGAA
GGTACCTAGCGGCCACAGAAGGAGTTCTCGTGGTGTCCTTCAACTACCGG
GTCAGTGGGCTAGGATTCCTCTACGCCGGCACCGAGGACGCGCCGGGCAA
CGTTGGTCTCACAGACCAGGTCCTGGCGCTGAGGTGGGTTCAGGACAACG
TCGCGGCGTTTGGAGGTGACCCGGCAAGGGTGACTCTATTTGGCGAAAGC
GCCGGTGGAATCAGTATCGGGTACCACCTGATATCTCCCGGCAGCAGGGA
CCTCTTCAGCCGCGCGATACTGCAGAGTGGGACCGCTCTAAATCCCTGGG
GGTACAACTCTGAGGCTGATGCCTACGAGAAAACAGTGATCTTTGCCGAC
CATTTGGGATGTCCAGCAGAGAAAGGTTCAGCCGAAATGCTGGCCTGTCT
CCGGGAAAAGGACGCACAACAACTTGTTGATACTTCTGTCGTGGGATACG
CAGCAATCATTGCTGTTGTGGACGGCAGTTTCCTACCGGAAAGCCCACCA
GTGGCCTATCAGAGTGGAGCGTTCAAAAGCGCAGACCTCCTGCTCGGTTC
TAATGAAGACGAAGGTGCCTTCTTCCTCATTAGCAACCAATATCCTGGTT
TTAGCGAGGACTCGGAAAGCCTGATCACCAAGGAGCAGTTTCTAGAGTGT
ATTCGCTACTATTATCCACCATTAAATGAGTTCGCTGTTGATGCCGTCGC
CTTTCAGTACACAGATTGGGAGCGTCTAGACCAAGATACCATGTACCGCG
ACGCGATGGACGATCTTTACGGTGATAACTCCTTCGTCTGCCCTGACGTC
AACACTGGTCGGGCCCATCTAAGGCATGGAGCAACGCCCTACATGTACCG
GTTTGCCCACCGCCCCTCGAACTCCCCCGAACCGGCCTGGGTGGGAGCGG
TCCACGCCGATGAGGTGCCGTTCGTGTTCGGCCTGCCTCTGGATCCTGTC
TACGGGTTCACCGAGGAGGAGAAAGACCTGGCTCGCAGGATGATGCGGCA
CTGGGCGAACTTTGCCAGAACAGGGAATCCAAACAACAACGACGAGGCTG
TTTGGAGCGCCTTTAACGCGACCGATGGAGGGTACATGGTGCTGGACACG
TCTGAGCCCCGGATGTTGACCGGCCCAAGCACAGAAAACTGTGCTTTCTG
GGACAACTACTTAAAGCCCCTTTGGAACAAGACAGAGGCTTTAATGAATG
ATGTCCCGTGTGCCACCGGTTCAGGAGTGCCACAATACAACCGGCCAGGG
ATCGTGGGGAGGAGTTTGACAGCTTGCGTACTGGCGGTCGTCTTGCACCT
TGTCACTGTGTACTGTTAGAGCACCACTCCCGTTCGGCAAACAGGTAGTG
ACCAGGCAGTGCACTGGTTTAGTGTTTCCAGAAAGATTGTCGCAATTCTA
ACTGGATATATTCAGGCAAAGGGATCCGACATGGCTCATCACATCATTAC
AGTAGTCCTTGCTGCGCTGTTGACCTTACTAGAAGTAGAAGCCGTGGCTG
ATGTGACGACGCCGGCAGGACGACTTGTCGGGCTGGAGTTGGACGTGCTC
GGGACGACGGTTCACGCCTTCCTGGGAATCCCGTTCGCACAGCCGCCAGT
CGGAGAACGGCGGTTCAGACGGGCCGAACCCATGGAGCCATGGGACGGGA
TATACAACGCAAGAAGGAGGCCCAATGCATGCAGCCAGAACAGAGAAGTA
GTGAATGATGAATCCAACCTGTGGGGATTGAATACGCCGAAGAGCGAGGA
CTGTCTGTACCTGAACGTGTGGCAGCCAACCCCCGTCCCTACTGGAGCCG
CCGTGCTGGTCTGGATTTACGGGGGCGCCTTCGAGTGGGGATCCTCGTCA
ATTCCCGCATACGACGGAAGGTACCTAGCGGCCACAGAAGGAGTTCTCGT
GGTGTCCTTCAACTACCGGGTCAGTGGGCTAGGATTCCTCTACGCCGGCA
CCGAGGACGCGCCGGGCAACGTTGGTCTCACAGACCAGGTCCTGGCGCTG
AGGTGGGTTCAGGACAACGTCGCGGCGTTTGGAGGTGACCCGGCAAGGGT
GACTCTATTTGGCGAAAGCGCCGGTGGAATCAGTATCGGGTACCACCTGA
TATCTCCCGGCAGCAGGGACCTCTTCAGCCGCGCGATACTGCAGAGTGGG
ACCGCTCTAAATCCCTGGGGGTACAACTCTGAGGCTGATGCCTACGAGAA
AACAGTGATCTTTGCCGACCATTTGGGATGTCCAGCAGAGAAAGGTTCAG
CCGAAATGCTGGCCTGTCTCCGGGAAAAGGACGCACAACAACTTGTTGAT
ACTTCTGTCGTGGGATACGCAGCAATCATTGCTGTTGTGGACGGCAGTTT
CCTACCGGAAAGCCCACCAGTGGCCTATCAGAGTGGAGCGTTCAAAAGCG
CAGACCTCCTGCTCGGTTCTAATGAAGACGAAGGTGCCTTCTTCCTCATT
AGCAACCAATATCCTGGTTTTAGCGAGGACTCGGAAAGCCTGATCACCAA
GGAGCAGTTTCTAGAGTGTATTCGCTACTATTATCCACCATTAAATGAGT
TCGCTGTTGATGCCGTCGCCTTTCAGTACACAGATTGGGAGCGTCTAGAC
CAAGATACCATGTACCGCGACGCGATGGACGATCTTTACGGTGATAACTC
CTTCGTCTGCCCTGACGTCAACACTGGTCGGGCCCATCTAAGGCATGGAG
CAACGCCCTACATGTACCGGTTTGCCCACCGCCCCTCGAACTCCCCCGAA
CCGGCCTGGGTGGGAGCGGTCCACGCCGATGAGGTGCCGTTCGTGTTCGG
CCTGCCTCTGGATCCTGTCTACGGGTTCACCGAGGAGGAGAAAGACCTGG
CTCGCAGGATGATGCGGCACTGGGCGAACTTTGCCAGAACAGGGAATCCA
AACAACAACGACGAGGCTGTTTGGAGCGCCTTTAACGCGACCGATGGAGG
GTACATGGTGCTGGACACGTCTGAGCCCCGGATGTTGACCGGCCCAAGCA
CAGAAAACTGTGCTTTCTGGGACAACTACTTAAAGCCCCTTTGGAACAAG
ACAGAGGCTTTAATGAATGATGTCCCGTGTGCCACCGGTTCAGGAGTGCC
ACAATACAACCGGCCAGGGATCGTGGGGAGGAGTTTGACAGCTTGCGTAC
TGGCGGTCGTCTTGCACCTTGTCACTGTGTACTGTTAGAGCACCACTCCC
GTTCGGCAAACAGGTAGTGACCAGGCAGTGCACTGGTTTAGTGTTTCCAG
AAAGATTGTCGCAATTCTAACTGGATATATTCAGGCAAAGGGATCCGACA
TGGCTCATCACATCATTACAGTAGTCCTTGCTGCGCTGTTGACCTTACTA
GAAGTAGAAGCCGTGGCTGATGTGACGACGCCGGCAGGACGACTTGTCGG
GCTGGAGTTGGACGTGCTCGGGACGACGGTTCACGCCTTCCTGGGAATCC
CGTTCGCACAGCCGCCAGTCGGAGAACGGCGGTTCAGACGGGCCGAACCC
ATGGAGCCATGGGACGGGATATACAACGCAAGAAGGAGGCCCAATGCATG
CAGCCAGAACAGAGAAGTAGTGAATGATGAATCCAACCTGTGGGGATTGA
ATACGCCGAAGAGCGAGGACTGTCTGTACCTGAACGTGTGGCAGCCAACC
CCCGTCCCTACTGGAGCCGCCGTGCTGGTCTGGATTTACGGGGGCGCCTT
CGAGTGGGGATCCTCGTCAATTCCCGCATACGACGGAAGGTACCTAGCGG
CCACAGAAGGAGTTCTCGTGGTGTCCTTCAACTACCGGGTCAGTGGGCTA
GGATTCCTCTACGCCGGCACCGAGGACGCGCCGGGCAACGTTGGTCTCAC
AGACCAGGTCCTGGCGCTGAGGTGGGTTCAGGACAACGTCGCGGCGTTTG
GAGGTGACCCGGCAAGGGTGACTCTATTTGGCGAAAGCGCCGGTGGAATC
AGTATCGGGTACCACCTGATATCTCCCGGCAGCAGGGACCTCTTCAGCCG
CGCGATACTGCAGAGTGGGACCGCTCTAAATCCCTGGGGGTACAACTCTG
AGGCTGATGCCTACGAGAAAACAGTGATCTTTGCCGACCATTTGGGATGT
CCAGCAGAGAAAGGTTCAGCCGAAATGCTGGCCTGTCTCCGGGAAAAGGA
CGCACAACAACTTGTTGATACTTCTGTCGTGGGATACGCAGCAATCATTG
CTGTTGTGGACGGCAGTTTCCTACCGGAAAGCCCACCAGTGGCCTATCAG
AGTGGAGCGTTCAAAAGCGCAGACCTCCTGCTCGGTTCTAATGAAGACGA
AGGTGCCTTCTTCCTCATTAGCAACCAATATCCTGGTTTTAGCGAGGACT
CGGAAAGCCTGATCACCAAGGAGCAGTTTCTAGAGTGTATTCGCTACTAT
TATCCACCATTAAATGAGTTCGCTGTTGATGCCGTCGCCTTTCAGTACAC
AGATTGGGAGCGTCTAGACCAAGATACCATGTACCGCGACGCGATGGACG
ATCTTTACGGTGATAACTCCTTCGTCTGCCCTGACGTCAACACTGGTCGG
GCCCATCTAAGGCATGGAGCAACGCCCTACATGTACCGGTTTGCCCACCG
CCCCTCGAACTCCCCCGAACCGGCCTGGGTGGGAGCGGTCCACGCCGATG
AGGTGCCGTTCGTGTTCGGCCTGCCTCTGGATCCTGTCTACGGGTTCACC
GAGGAGGAGAAAGACCTGGCTCGCAGGATGATGCGGCACTGGGCGAACTT
TGCCAGAACAGGGAATCCAAACAACAACGACGAGGCTGTTTGGAGCGCCT
TTAACGCGACCGATGGAGGGTACATGGTGCTGGACACGTCTGAGCCCCGG
ATGTTGACCGGCCCAAGCACAGAAAACTGTGCTTTCTGGGACAACTACTT
AAAGCCCCTTTGGAACAAGACAGAGGCTTTAATGAATGATGTCCCGTGTG
CCACCGGTTCAGGAGTGCCACAATACAACCGGCCAGGGATCGTGGGGAGG
AGTTTGACAGCTTGCGTACTGGCGGTCGTCTTGCACCTTGTCACTGTGTA
CTGTTAGAGCACCACTCCCGTTCGGCAAACAGGTAGTGACCAGGCAGTGC
ACTGGTTTAGTGTTTCCAGAAAGATTGTCGCAATTCTAACTGGATATATT
CAGGCAAAGGGATCCGACATGGCTCATCACATCATTACAGTAGTCCTTGC
TGCGCTGTTGACCTTACTAGAAGTAGAAGCCGTGGCTGATGTGACGACGC
CGGCAGGACGACTTGTCGGGCTGGAGTTGGACGTGCTCGGGACGACGGTT
CACGCCTTCCTGGGAATCCCGTTCGCACAGCCGCCAGTCGGAGAACGGCG
GTTCAGACGGGCCGAACCCATGGAGCCATGGGACGGGATATACAACGCAA
GAAGGAGGCCCAATGCATGCAGCCAGAACAGAGAAGTAGTGAATGATGAA
TCCAACCTGTGGGGATTGAATACGCCGAAGAGCGAGGACTGTCTGTACCT
GAACGTGTGGCAGCCAACCCCCGTCCCTACTGGAGCCGCCGTGCTGGTCT
GGATTTACGGGGGCGCCTTCGAGTGGGGATCCTCGTCAATTCCCGCATAC
GACGGAAGGTACCTAGCGGCCACAGAAGGAGTTCTCGTGGTGTCCTTCAA
CTACCGGGTCAGTGGGCTAGGATTCCTCTACGCCGGCACCGAGGACGCGC
CGGGCAACGTTGGTCTCACAGACCAGGTCCTGGCGCTGAGGTGGGTTCAG
GACAACGTCGCGGCGTTTGGAGGTGACCCGGCAAGGGTGACTCTATTTGG
CGAAAGCGCCGGTGGAATCAGTATCGGGTACCACCTGATATCTCCCGGCA
GCAGGGACCTCTTCAGCCGCGCGATACTGCAGAGTGGGACCGCTCTAAAT
CCCTGGGGGTACAACTCTGAGGCTGATGCCTACGAGAAAACAGTGATCTT
TGCCGACCATTTGGGATGTCCAGCAGAGAAAGGTTCAGCCGAAATGCTGG
CCTGTCTCCGGGAAAAGGACGCACAACAACTTGTTGATACTTCTGTCGTG
GGATACGCAGCAATCATTGCTGTTGTGGACGGCAGTTTCCTACCGGAAAG
CCCACCAGTGGCCTATCAGAGTGGAGCGTTCAAAAGCGCAGACCTCCTGC
TCGGTTCTAATGAAGACGAAGGTGCCTTCTTCCTCATTAGCAACCAATAT
CCTGGTTTTAGCGAGGACTCGGAAAGCCTGATCACCAAGGAGCAGTTTCT
AGAGTGTATTCGCTACTATTATCCACCATTAAATGAGTTCGCTGTTGATG
CCGTCGCCTTTCAGTACACAGATTGGGAGCGTCTAGACCAAGATACCATG
TACCGCGACGCGATGGACGATCTTTACGGTGATAACTCCTTCGTCTGCCC
TGACGTCAACACTGGTCGGGCCCATCTAAGGCATGGAGCAACGCCCTACA
TGTACCGGTTTGCCCACCGCCCCTCGAACTCCCCCGAACCGGCCTGGGTG
GGAGCGGTCCACGCCGATGAGGTGCCGTTCGTGTTCGGCCTGCCTCTGGA
TCCTGTCTACGGGTTCACCGAGGAGGAGAAAGACCTGGCTCGCAGGATGA
TGCGGCACTGGGCGAACTTTGCCAGAACAGGGAATCCAAACAACAACGAC
GAGGCTGTTTGGAGCGCCTTTAACGCGACCGATGGAGGGTACATGGTGCT
GGACACGTCTGAGCCCCGGATGTTGACCGGCCCAAGCACAGAAAACTGTG
CTTTCTGGGACAACTACTTAAAGCCCCTTTGGAACAAGACAGAGGCTTTA
ATGAATGATGTCCCGTGTGCCACCGGTTCAGGAGTGCCACAATACAACCG
GCCAGGGATCGTGGGGAGGAGTTTGACAGCTTGCGTACTGGCGGTCGTCT
TGCACCTTGTCACTGTGTACTGTTAGAGCACCACTCCCGTTCGGCAAACA
GGTAGTGACCAGGCAGTGCACTGGTTTAGTGTTTCCAGAAAGATTGTCGC
AATTCTAACTGGATATATTCAGGCAAAGGGATCCGACATGGCTCATCACA
TCATTACAGTAGTCCTTGCTGCGCTGTTGACCTTACTAGAAGTAGAAGCC
GTGGCTGATGTGACGACGCCGGCAGGACGACTTGTCGGGCTGGAGTTGGA
CGTGCTCGGGACGACGGTTCACGCCTTCCTGGGAATCCCGTTCGCACAGC
CGCCAGTCGGAGAACGGCGGTTCAGACGGGCCGAACCCATGGAGCCATGG
GACGGGATATACAACGCAAGAAGGAGGCCCAATGCATGCAGCCAGAACAG
AGAAGTAGTGAATGATGAATCCAACCTGTGGGGATTGAATACGCCGAAGA
GCGAGGACTGTCTGTACCTGAACGTGTGGCAGCCAACCCCCGTCCCTACT
GGAGCCGCCGTGCTGGTCTGGATTTACGGGGGCGCCTTCGAGTGGGGATC
CTCGTCAATTCCCGCATACGACGGAAGGTACCTAGCGGCCACAGAAGGAG
TTCTCGTGGTGTCCTTCAACTACCGGGTCAGTGGGCTAGGATTCCTCTAC
GCCGGCACCGAGGACGCGCCGGGCAACGTTGGTCTCACAGACCAGGTCCT
GGCGCTGAGGTGGGTTCAGGACAACGTCGCGGCGTTTGGAGGTGACCCGG
CAAGGGTGACTCTATTTGGCGAAAGCGCCGGTGGAATCAGTATCGGGTAC
CACCTGATATCTCCCGGCAGCAGGGACCTCTTCAGCCGCGCGATACTGCA
GAGTGGGACCGCTCTAAATCCCTGGGGGTACAACTCTGAGGCTGATGCCT
ACGAGAAAACAGTGATCTTTGCCGACCATTTGGGATGTCCAGCAGAGAAA
GGTTCAGCCGAAATGCTGGCCTGTCTCCGGGAAAAGGACGCACAACAACT
TGTTGATACTTCTGTCGTGGGATACGCAGCAATCATTGCTGTTGTGGACG
GCAGTTTCCTACCGGAAAGCCCACCAGTGGCCTATCAGAGTGGAGCGTTC
AAAAGCGCAGACCTCCTGCTCGGTTCTAATGAAGACGAAGGTGCCTTCTT
CCTCATTAGCAACCAATATCCTGGTTTTAGCGAGGACTCGGAAAGCCTGA
TCACCAAGGAGCAGTTTCTAGAGTGTATTCGCTACTATTATCCACCATTA
AATGAGTTCGCTGTTGATGCCGTCGCCTTTCAGTACACAGATTGGGAGCG
TCTAGACCAAGATACCATGTACCGCGACGCGATGGACGATCTTTACGGTG
ATAACTCCTTCGTCTGCCCTGACGTCAACACTGGTCGGGCCCATCTAAGG
CATGGAGCAACGCCCTACATGTACCGGTTTGCCCACCGCCCCTCGAACTC
CCCCGAACCGGCCTGGGTGGGAGCGGTCCACGCCGATGAGGTGCCGTTCG
TGTTCGGCCTGCCTCTGGATCCTGTCTACGGGTTCACCGAGGAGGAGAAA
GACCTGGCTCGCAGGATGATGCGGCACTGGGCGAACTTTGCCAGAACAGG
GAATCCAAACAACAACGACGAGGCTGTTTGGAGCGCCTTTAACGCGACCG
ATGGAGGGTACATGGTGCTGGACACGTCTGAGCCCCGGATGTTGACCGGC
CCAAGCACAGAAAACTGTGCTTTCTGGGACAACTACTTAAAGCCCCTTTG
GAACAAGACAGAGGCTTTAATGAATGATGTCCCGTGTGCCACCGGTTCAG
GAGTGCCACAATACAACCGGCCAGGGATCGTGGGGAGGAGTTTGACAGCT
TGCGTACTGGCGGTCGTCTTGCACCTTGTCACTGTGTACTGTTAGAGCAC
CACTCCCGTTCGGCAAACAGGTAGTGACCAGGCAGTGCACTGGTTTAGTG
TTTCCAGAAAGATTGTCGCAATTCTAACTGGATATATTCAGGCAAAGGGA
TCCGACATGGCTCATCACATCATTACAGTAGTCCTTGCTGCGCTGTTGAC
CTTACTAGAAGTAGAAGCCGTGGCTGATGTGACGACGCCGGCAGGACGAC
TTGTCGGGCTGGAGTTGGACGTGCTCGGGACGACGGTTCACGCCTTCCTG
GGAATCCCGTTCGCACAGCCGCCAGTCGGAGAACGGCGGTTCAGACGGGC
CGAACCCATGGAGCCATGGGACGGGATATACAACGCAAGAAGGAGGCCCA
ATGCATGCAGCCAGAACAGAGAAGTAGTGAATGATGAATCCAACCTGTGG
GGATTGAATACGCCGAAGAGCGAGGACTGTCTGTACCTGAACGTGTGGCA
GCCAACCCCCGTCCCTACTGGAGCCGCCGTGCTGGTCTGGATTTACGGGG
GCGCCTTCGAGTGGGGATCCTCGTCAATTCCCGCATACGACGGAAGGTAC
CTAGCGGCCACAGAAGGAGTTCTCGTGGTGTCCTTCAACTACCGGGTCAG
TGGGCTAGGATTCCTCTACGCCGGCACCGAGGACGCGCCGGGCAACGTTG
GTCTCACAGACCAGGTCCTGGCGCTGAGGTGGGTTCAGGACAACGTCGCG
GCGTTTGGAGGTGACCCGGCAAGGGTGACTCTATTTGGCGAAAGCGCCGG
TGGAATCAGTATCGGGTACCACCTGATATCTCCCGGCAGCAGGGACCTCT
TCAGCCGCGCGATACTGCAGAGTGGGACCGCTCTAAATCCCTGGGGGTAC
AACTCTGAGGCTGATGCCTACGAGAAAACAGTGATCTTTGCCGACCATTT
GGGATGTCCAGCAGAGAAAGGTTCAGCCGAAATGCTGGCCTGTCTCCGGG
AAAAGGACGCACAACAACTTGTTGATACTTCTGTCGTGGGATACGCAGCA
ATCATTGCTGTTGTGGACGGCAGTTTCCTACCGGAAAGCCCACCAGTGGC
CTATCAGAGTGGAGCGTTCAAAAGCGCAGACCTCCTGCTCGGTTCTAATG
AAGACGAAGGTGCCTTCTTCCTCATTAGCAACCAATATCCTGGTTTTAGC
GAGGACTCGGAAAGCCTGATCACCAAGGAGCAGTTTCTAGAGTGTATTCG
CTACTATTATCCACCATTAAATGAGTTCGCTGTTGATGCCGTCGCCTTTC
AGTACACAGATTGGGAGCGTCTAGACCAAGATACCATGTACCGCGACGCG
ATGGACGATCTTTACGGTGATAACTCCTTCGTCTGCCCTGACGTCAACAC
TGGTCGGGCCCATCTAAGGCATGGAGCAACGCCCTACATGTACCGGTTTG
CCCACCGCCCCTCGAACTCCCCCGAACCGGCCTGGGTGGGAGCGGTCCAC
GCCGATGAGGTGCCGTTCGTGTTCGGCCTGCCTCTGGATCCTGTCTACGG
GTTCACCGAGGAGGAGAAAGACCTGGCTCGCAGGATGATGCGGCACTGGG
CGAACTTTGCCAGAACAGGGAATCCAAACAACAACGACGAGGCTGTTTGG
AGCGCCTTTAACGCGACCGATGGAGGGTACATGGTGCTGGACACGTCTGA
GCCCCGGATGTTGACCGGCCCAAGCACAGAAAACTGTGCTTTCTGGGACA
ACTACTTAAAGCCCCTTTGGAACAAGACAGAGGCTTTAATGAATGATGTC
CCGTGTGCCACCGGTTCAGGAGTGCCACAATACAACCGGCCAGGGATCGT
GGGGAGGAGTTTGACAGCTTGCGTACTGGCGGTCGTCTTGCACCTTGTCA
CTGTGTACTGTTAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
gene:BL96939gene:BL96939Branchiostoma lanceolatumgene
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
transcript:BL96939_cuf3transcript:BL96939_cuf3-proteinBranchiostoma lanceolatumpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
BL96939_cuf3-E1BL96939_cuf3-E1-1564476830-431773Branchiostoma lanceolatumexon
BL96939_cuf3-E2BL96939_cuf3-E2-1564476830-431770Branchiostoma lanceolatumexon
BL96939_cuf3-E3BL96939_cuf3-E3-1564476830-431768Branchiostoma lanceolatumexon
BL96939_cuf3-E4BL96939_cuf3-E4-1564476830-431766Branchiostoma lanceolatumexon
BL96939_cuf3-E5BL96939_cuf3-E5-1564476830-431764Branchiostoma lanceolatumexon
BL96939_cuf3-E6BL96939_cuf3-E6-1564476830-431762Branchiostoma lanceolatumexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000307genomeSc0000307:283449..288944 -
Properties
Property NameValue
Transcript idBL96939_cuf3
Biotypeprotein_coding