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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL96935_cuf1 >transcript:BL96935_cuf1-protein ID=transcript:BL96935_cuf1-protein|Name=transcript:BL96935_cuf1|organism=Branchiostoma lanceolatum|type=polypeptide|length=183bp
SAPKTSGTDNNGFTPPSDDTELHTAVNSGDADHVRTLLDQPGVDVNAKGD
GNFTPLHLAVINNDVSIVKLLLERDADIYAEGADHVSPWRLSQAAHCSLQ
ILQMILKAAVDLRGDVVDSNLGASSPRKAVPAADCGWAVMEVAKSGGSQS
AEKLRSLLEIGGDVILTQRDSRGRTVLHHAVTN Run BLAST on NCBI mRNA from alignment at Sc0000145:207179..209699- Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL96935_cuf1 ID=transcript:BL96935_cuf1|Name=transcript:BL96935_cuf1|organism=Branchiostoma lanceolatum|type=mRNA|length=2521bp|location=Sequence derived from alignment at Sc0000145:207179..209699- (Branchiostoma lanceolatum)
CTCTGCGCCAAAGGTAAAGTTAACATCTACTAACATCATTCCGCCAGGGT
ACATAATTCCGCCACCCCGAAAAGATATACGTTCAACCAAATTTCCAACC
CAAAGTCCCCACGTGTAATGTACTCCTGTATATCTAAACTGTGCATACCT
ATACCTGGGGGTTAGATTTCTCAAACACACTGTATTCTAAAGTAACGGAT
TCATGTAACCCGGCGGATTAATGTTAATGGAGGTTACATCAAAACTAGAA
AGCTAAACATTTTGTTCCTTTAACTTATGTTTATGACTGGGGTGATCCAT
TTTTTTAGTGGAAGTATTCTAGAATGGTCCATCATGAATGAGATTGTATG
TGGAAGAGTCTATTCTTGCATAGGGGTCAATAGGGGAAATCTCCATTTCA
GGCTGGGATGACTTTTGCAGTAGAAAACGTTTTGGCAGAAGTATTTTCTT
GATATTTCAATTTGCCCAAGTGTTATTTTGGAACAGTCCATTTTTTTGCA
TGGGGAGGAGTATGGCTAAATATGCTGTGTTTGCTTAGGGCCAAATGGCG
GCCTTTCTAGTTTTAGAGCAGTATTAGAAGTCCTGTTAGTGGCATTATAT
ATTCTTTTTATCTGTATGCCTGTACTTAGGCCGATCGGTACAACAAAGGT
TATCATTCTATTCCTAACAGACGTCCGGTACCGACAACAATGGCTTCACG
CCACCTTCCGACGACACAGAACTTCACACAGCTGTCAATTCTGGGGACGC
CGATCACGTCAGGGTACGTCGCACATTATTACTCATCTCTAATCAATCCT
AACATTTTCTACGAAAGCCCACAACGACACACCTTGGAGGCATCTCGGAA
GCATCTCAAAGGCCTCCGAGAAGCCTCCGCGCGCTGCCTCCGAGATACCT
TCGAGATGCTTCCGAAATGCCTCCGAAATACCTCCGAAATGCCTCCGAAA
TGCCTCCGAGATGCCTCCGAAATGCCTCCGAGATGAGTCCGAAATACCTC
CGAGATGCCTCCGAAATGCCTCTGAGATGCCTTCGAGATGCCTCCGAGAT
GTGTAGTTACGGGCTTTCGTAATTTACATACCTAGACATTGATAGTGACG
ACTTAGTCGTTCAAAGAAAGATGTTTTGAAAATAAGATGATAACTTGTCG
AATTGACATGGATTTCTACGGACTTATCCATGCTCAATAAGGACGTTAGA
CATTCTACCTACATAACGTTAACTTTATGACCTTGCTTACGACAACGTCC
CAACATTGTCTGGGGAAGTTCGGGAGGGCATGGTCGGCTACAATGTATGT
GTGACAGGAGTTTTACTCTCAAGAATGTTTTGCAATCTCTTCGTTTCTTC
TAAAAGATTCTGCATACATTTGTGTAGACGCTTTTGGATCAACCAGGAGT
GGATGTGAACGCAAAGGGAGATGGGAACTTCACCCCCCTACACCTGGCAG
TCATCAACAACGACGTCTCCATAGTCAAACTTTTGGTACGTCCGCAACTT
TTGTGACAGTAACACTAGTTACAGTGCGTTCTTAGTCTTAATTATCAAAC
ACTTCTGACCAAATTGGAAACTGAATGGATTTTTCCACAAAATCATCTAT
TCCAAAAGTATGGTGCTGCTCAAAGACCAATTCCTTGGGGAATACATTGG
CGGATTTTCTATAACATTTTCAGTTCAATCGCAGTACTATGCTTCGCTCC
TGAAGCGTCGCCAGAAAAAGTAAAGCCAACGTTACTGTCCCTTCTTAAAC
TGAATTTTGTTATGACACTCTCCGCAGTTGGAGAGGGATGCAGACATCTA
CGCCGAAGGTGCAGATCACGTGTCCCCCTGGCGGTTGTCCCAGGCAGCGC
ACTGCTCTCTGCAGATCCTACAGATGATCCTAAAGGCTGCAGTAGACCTC
CGAGGGGACGTTGTGTAAGTTCAATGATTCTAATACATGGTGTAATTGTA
TTATTTGAATGAAACGCTTTCACATTTCTAGTCGTAGCAGCTGTGAAAAA
AAAACATGGCATGGAATCATTTTCTTCTACTCAGATATCTTGCATGCATC
CGTAGATAGTTTCATCGGGTACGTCACTAGAAAACAAAGTTCTTATGAAC
TACAGGTGTGTATGTGTAAATTCTGTACGTTTGGGGACCGCATCTGTTAG
CAGCGACACCTAGCTGCAGTTCGAAATAGCACAAGCAGTATTGCCATAAT
ATGAAGAAGGTGACAGACGGTCACCGAAAAGTCGGCTTGAACAAAGCACT
TGGCTGTGTACATATGACTTTGTTATCCACTACTATATTGCATGTATATC
GATTTTTTCATGACGTTCCAGTGATTCCAATCTGGGCGCGTCATCGCCCA
GAAAGGCGGTTCCAGCGGCAGACTGCGGCTGGGCGGTGATGGAAGTCGCT
AAGAGCGGCGGCAGTCAGTCGGCAGAGAAGCTCAGAAGCCTCCTGGAAAT
CGGCGGTGATGTCATTCTGACACAGCGGGACTCTCGCGGCAGGACAGTAC
TGCATCACGCGGTGACCAATC Coding sequence (CDS) from alignment at Sc0000145:207179..209699- >transcript:BL96935_cuf1 ID=transcript:BL96935_cuf1|Name=transcript:BL96935_cuf1|organism=Branchiostoma lanceolatum|type=CDS|length=2745bp|location=Sequence derived from alignment at Sc0000145:207179..209699- (Branchiostoma lanceolatum)
TCTGCGCCAAAGACGTCCGGTACCGACAACAATGGCTTCACGCCACCTTC
CGACGACACAGAACTTCACACAGCTGTCAATTCTGGGGACGCCGATCACG
TCAGGACGCTTTTGGATCAACCAGGAGTGGATGTGAACGCAAAGGGAGAT
GGGAACTTCACCCCCCTACACCTGGCAGTCATCAACAACGACGTCTCCAT
AGTCAAACTTTTGTTGGAGAGGGATGCAGACATCTACGCCGAAGGTGCAG
ATCACGTGTCCCCCTGGCGGTTGTCCCAGGCAGCGCACTGCTCTCTGCAG
ATCCTACAGATGATCCTAAAGGCTGCAGTAGACCTCCGAGGGGACGTTGT
TGATTCCAATCTGGGCGCGTCATCGCCCAGAAAGGCGGTTCCAGCGGCAG
ACTGCGGCTGGGCGGTGATGGAAGTCGCTAAGAGCGGCGGCAGTCAGTCG
GCAGAGAAGCTCAGAAGCCTCCTGGAAATCGGCGGTGATGTCATTCTGAC
ACAGCGGGACTCTCGCGGCAGGACAGTACTGCATCACGCGGTGACCAATT
CTGCGCCAAAGACGTCCGGTACCGACAACAATGGCTTCACGCCACCTTCC
GACGACACAGAACTTCACACAGCTGTCAATTCTGGGGACGCCGATCACGT
CAGGACGCTTTTGGATCAACCAGGAGTGGATGTGAACGCAAAGGGAGATG
GGAACTTCACCCCCCTACACCTGGCAGTCATCAACAACGACGTCTCCATA
GTCAAACTTTTGTTGGAGAGGGATGCAGACATCTACGCCGAAGGTGCAGA
TCACGTGTCCCCCTGGCGGTTGTCCCAGGCAGCGCACTGCTCTCTGCAGA
TCCTACAGATGATCCTAAAGGCTGCAGTAGACCTCCGAGGGGACGTTGTT
GATTCCAATCTGGGCGCGTCATCGCCCAGAAAGGCGGTTCCAGCGGCAGA
CTGCGGCTGGGCGGTGATGGAAGTCGCTAAGAGCGGCGGCAGTCAGTCGG
CAGAGAAGCTCAGAAGCCTCCTGGAAATCGGCGGTGATGTCATTCTGACA
CAGCGGGACTCTCGCGGCAGGACAGTACTGCATCACGCGGTGACCAATTC
TGCGCCAAAGACGTCCGGTACCGACAACAATGGCTTCACGCCACCTTCCG
ACGACACAGAACTTCACACAGCTGTCAATTCTGGGGACGCCGATCACGTC
AGGACGCTTTTGGATCAACCAGGAGTGGATGTGAACGCAAAGGGAGATGG
GAACTTCACCCCCCTACACCTGGCAGTCATCAACAACGACGTCTCCATAG
TCAAACTTTTGTTGGAGAGGGATGCAGACATCTACGCCGAAGGTGCAGAT
CACGTGTCCCCCTGGCGGTTGTCCCAGGCAGCGCACTGCTCTCTGCAGAT
CCTACAGATGATCCTAAAGGCTGCAGTAGACCTCCGAGGGGACGTTGTTG
ATTCCAATCTGGGCGCGTCATCGCCCAGAAAGGCGGTTCCAGCGGCAGAC
TGCGGCTGGGCGGTGATGGAAGTCGCTAAGAGCGGCGGCAGTCAGTCGGC
AGAGAAGCTCAGAAGCCTCCTGGAAATCGGCGGTGATGTCATTCTGACAC
AGCGGGACTCTCGCGGCAGGACAGTACTGCATCACGCGGTGACCAATTCT
GCGCCAAAGACGTCCGGTACCGACAACAATGGCTTCACGCCACCTTCCGA
CGACACAGAACTTCACACAGCTGTCAATTCTGGGGACGCCGATCACGTCA
GGACGCTTTTGGATCAACCAGGAGTGGATGTGAACGCAAAGGGAGATGGG
AACTTCACCCCCCTACACCTGGCAGTCATCAACAACGACGTCTCCATAGT
CAAACTTTTGTTGGAGAGGGATGCAGACATCTACGCCGAAGGTGCAGATC
ACGTGTCCCCCTGGCGGTTGTCCCAGGCAGCGCACTGCTCTCTGCAGATC
CTACAGATGATCCTAAAGGCTGCAGTAGACCTCCGAGGGGACGTTGTTGA
TTCCAATCTGGGCGCGTCATCGCCCAGAAAGGCGGTTCCAGCGGCAGACT
GCGGCTGGGCGGTGATGGAAGTCGCTAAGAGCGGCGGCAGTCAGTCGGCA
GAGAAGCTCAGAAGCCTCCTGGAAATCGGCGGTGATGTCATTCTGACACA
GCGGGACTCTCGCGGCAGGACAGTACTGCATCACGCGGTGACCAATTCTG
CGCCAAAGACGTCCGGTACCGACAACAATGGCTTCACGCCACCTTCCGAC
GACACAGAACTTCACACAGCTGTCAATTCTGGGGACGCCGATCACGTCAG
GACGCTTTTGGATCAACCAGGAGTGGATGTGAACGCAAAGGGAGATGGGA
ACTTCACCCCCCTACACCTGGCAGTCATCAACAACGACGTCTCCATAGTC
AAACTTTTGTTGGAGAGGGATGCAGACATCTACGCCGAAGGTGCAGATCA
CGTGTCCCCCTGGCGGTTGTCCCAGGCAGCGCACTGCTCTCTGCAGATCC
TACAGATGATCCTAAAGGCTGCAGTAGACCTCCGAGGGGACGTTGTTGAT
TCCAATCTGGGCGCGTCATCGCCCAGAAAGGCGGTTCCAGCGGCAGACTG
CGGCTGGGCGGTGATGGAAGTCGCTAAGAGCGGCGGCAGTCAGTCGGCAG
AGAAGCTCAGAAGCCTCCTGGAAATCGGCGGTGATGTCATTCTGACACAG
CGGGACTCTCGCGGCAGGACAGTACTGCATCACGCGGTGACCAAT
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000145 | genome | Sc0000145:207179..209699 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL96935_cuf1 |
| Biotype | protein_coding |
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