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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL96930_cuf1 >transcript:BL96930_cuf1-protein ID=transcript:BL96930_cuf1-protein|Name=transcript:BL96930_cuf1|organism=Branchiostoma lanceolatum|type=polypeptide|length=309bp
VPQVNNIDDYAPRLDLVTNTTLSDQYCAQNQGPPSTSYLSVDRNLFASWD
GEDEGGIYDFSVGLSSTSSTSSPDIMAFTSTTAIPELWFSHPHISQNSLF
HLVIKAEDRAGRTTTKAVGPIVVDITPPQFVGQISLSKEGNYLVGRWSAN
DFYDQESQDPLQYQFAVGRHPSSADMSSFRDVETNGPCVSSQPPNCAAIE
TEALALHPSDSYYMFFKVTNPAGLSVIGTSRPYSIPGQLPAYGVVFDIAP
DVDDPAGSHDYEDIDAQTDTGVLSARWFGFSDDPAAVTYEVAVGTSSGTQ
DVRPFTPVS Run BLAST on NCBI mRNA from alignment at Sc0000014:2295568..2297711- Legend: five_prime_UTRexonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL96930_cuf1 ID=transcript:BL96930_cuf1|Name=transcript:BL96930_cuf1|organism=Branchiostoma lanceolatum|type=mRNA|length=2144bp|location=Sequence derived from alignment at Sc0000014:2295568..2297711- (Branchiostoma lanceolatum)
CCGTGCCTCAAGTAAACAACATTGATGACTACGCCCCGAGACTCGATCTC
GTGACGAACACCACTCTCTCCGACCAATACTGCGCTCAGAACCAAGGACC
ACCATCGACCAGCTACCTTTCGGTCGACCGGAATGTAAGTACTAATGTTG
TTATTCAGTCTCTCTTGAGGGCTTGTATTTGGCGATAATTATAACGACTT
ACAGTTAAAAAGATATTATTTTCTTATGATCCTGAGTACTTTTGTACCAA
CAAGGGTCATCCATGATGACTATACATTTAAGTCTTGGTCGAACAAACGC
ATACAACCAACCGCTTCTACAAGCAGGGTGAGAAATGAATACGACTTTGA
TGTGTATATATATCAGCGAAATTTGCATTAGCAATATGTGTCGGGCGAAA
GAACTTTCTCTACTAATAGAACGGGAACTAAACTTGCCTTTTTTTGGTAC
CACAGCTGTTTGCTTCCTGGGACGGTGAGGATGAGGGCGGGATTTACGAC
TTCTCGGTGGGGCTTAGCAGCACCAGCAGTACAAGCAGCCCTGACATCAT
GGCCTTCACCTCCACCACCGCCATCCCGGAGCTCTGGTTCTCCCACCCAC
ACATCAGCCAGAACTCTCTATTCCACCTCGTCATCAAGGCTGAAGATAGG
GCGGGACGAACCACCACCAAAGTAAGCCGTCTATACGCATTGTGGTATAA
TCAAACAAACATCACAAACCCTACTCCATGTGAGTACAGCACACGTCTGA
ATCAACATTATAATTTAAGTAAATCGATGTGCACAAGAAGTACTATAAGA
ATATGGCCTTTTTCGATCCAACCCCAGCAGAGCCAATAGCAGACCCTACA
TCGTAGACCCTACTTACCAAATGTAGAATGCATCGGTTTAACGATACTTC
GGCCTGCCGAGTTCATTCCAAGATTATGTAGAACACAACATGGTGCCAGA
AGTGGGACTCTACAGGGGATACTAAAGTTAATTCGTTCACAGAATATGTC
TGAGGTTGTTTCATTAAAAACAAAAGGGCTGTACTTTGTACATGTAATTG
ACTTCCTCCTTTTTTTCTTGCAGGCTGTAGGTCCCATTGTTGTAGACATA
ACTCCGCCTCAGTTTGTGGGACAAATATCGCTGTCAAAGGAAGGGAATTA
TCTAGTAGGGCGTTGGTCAGCGAACGACTTCTATGACCAAGAAAGCCAGG
ACCCACTGCAATATCAATTCGCTGTTGGTAAGTTTTGCATTCTATCAATT
CCACTTGATATTCGATGAAATGAGAATCGTATCAGGTGAGGGCATTGTTA
CAAAATTCGCCTTACTAATAATGTGAATCCATGAATCCAGTTAAAGCTGA
AATGATGTGGTCTGACTTTTATTCAGGACGTCACCCAAGCTCCGCTGACA
TGTCCAGTTTCCGCGATGTTGAAACCAATGGTCCCTGCGTGAGCTCTCAA
CCTCCGAACTGTGCAGCGATTGAAACAGAAGCATTAGCCCTGCATCCAAG
TGACAGTTACTACATGTTTTTCAAAGTGACAAACCCGGCAGGCTTGTCGG
TTATTGGCACCTCAAGACCTTACAGCATACCCGGCCAATTACCTGCGTAC
GGTGTCGTCTTTGACATTGCGCCGGATGTAGATGACCCAGCCGGAAGTCA
TGTAAGCTGTTGTTATCGATATACAATCTGAAGGCTAATAGTATTTATTT
TAAGTCAGCCGTAGCAGCTATCTGCTTTGTGACCAAGGCAAAGTTTCCCT
AAGTCTTTTAGCTTTATAGTAAGTTCTTTTGACTTTATAGTAAGTTATTT
TTACTTTATAGTAAGTGCTCTATTTTGTCCCACGCCCACTTAGTAGTATT
CTGTGCCCATCGTGGTACTAGTATTCAAAAAGCAAGTACTAGCTACCTGT
CATATTACTCGCAGTTCTGCCTTTATGGAAAATTAATTTGCTATTAATGT
CGAGTACTTTGATATCAAGGTTGTTATTTTTGTGTTTTCTTAAGGATTAT
GAAGACATCGACGCACAAACAGACACCGGAGTGTTATCTGCACGCTGGTT
CGGCTTCAGTGATGATCCAGCGGCAGTTACCTATGAGGTGGCAGTGGGTA
CTTCTTCTGGTACTCAGGACGTCCGACCCTTTACTCCTGTCAGC Coding sequence (CDS) from alignment at Sc0000014:2295568..2297711- >transcript:BL96930_cuf1 ID=transcript:BL96930_cuf1|Name=transcript:BL96930_cuf1|organism=Branchiostoma lanceolatum|type=CDS|length=4635bp|location=Sequence derived from alignment at Sc0000014:2295568..2297711- (Branchiostoma lanceolatum)
GTGCCTCAAGTAAACAACATTGATGACTACGCCCCGAGACTCGATCTCGT
GACGAACACCACTCTCTCCGACCAATACTGCGCTCAGAACCAAGGACCAC
CATCGACCAGCTACCTTTCGGTCGACCGGAATCTGTTTGCTTCCTGGGAC
GGTGAGGATGAGGGCGGGATTTACGACTTCTCGGTGGGGCTTAGCAGCAC
CAGCAGTACAAGCAGCCCTGACATCATGGCCTTCACCTCCACCACCGCCA
TCCCGGAGCTCTGGTTCTCCCACCCACACATCAGCCAGAACTCTCTATTC
CACCTCGTCATCAAGGCTGAAGATAGGGCGGGACGAACCACCACCAAAGC
TGTAGGTCCCATTGTTGTAGACATAACTCCGCCTCAGTTTGTGGGACAAA
TATCGCTGTCAAAGGAAGGGAATTATCTAGTAGGGCGTTGGTCAGCGAAC
GACTTCTATGACCAAGAAAGCCAGGACCCACTGCAATATCAATTCGCTGT
TGGACGTCACCCAAGCTCCGCTGACATGTCCAGTTTCCGCGATGTTGAAA
CCAATGGTCCCTGCGTGAGCTCTCAACCTCCGAACTGTGCAGCGATTGAA
ACAGAAGCATTAGCCCTGCATCCAAGTGACAGTTACTACATGTTTTTCAA
AGTGACAAACCCGGCAGGCTTGTCGGTTATTGGCACCTCAAGACCTTACA
GCATACCCGGCCAATTACCTGCGTACGGTGTCGTCTTTGACATTGCGCCG
GATGTAGATGACCCAGCCGGAAGTCATGATTATGAAGACATCGACGCACA
AACAGACACCGGAGTGTTATCTGCACGCTGGTTCGGCTTCAGTGATGATC
CAGCGGCAGTTACCTATGAGGTGGCAGTGGGTACTTCTTCTGGTACTCAG
GACGTCCGACCCTTTACTCCTGTCAGCGTGCCTCAAGTAAACAACATTGA
TGACTACGCCCCGAGACTCGATCTCGTGACGAACACCACTCTCTCCGACC
AATACTGCGCTCAGAACCAAGGACCACCATCGACCAGCTACCTTTCGGTC
GACCGGAATCTGTTTGCTTCCTGGGACGGTGAGGATGAGGGCGGGATTTA
CGACTTCTCGGTGGGGCTTAGCAGCACCAGCAGTACAAGCAGCCCTGACA
TCATGGCCTTCACCTCCACCACCGCCATCCCGGAGCTCTGGTTCTCCCAC
CCACACATCAGCCAGAACTCTCTATTCCACCTCGTCATCAAGGCTGAAGA
TAGGGCGGGACGAACCACCACCAAAGCTGTAGGTCCCATTGTTGTAGACA
TAACTCCGCCTCAGTTTGTGGGACAAATATCGCTGTCAAAGGAAGGGAAT
TATCTAGTAGGGCGTTGGTCAGCGAACGACTTCTATGACCAAGAAAGCCA
GGACCCACTGCAATATCAATTCGCTGTTGGACGTCACCCAAGCTCCGCTG
ACATGTCCAGTTTCCGCGATGTTGAAACCAATGGTCCCTGCGTGAGCTCT
CAACCTCCGAACTGTGCAGCGATTGAAACAGAAGCATTAGCCCTGCATCC
AAGTGACAGTTACTACATGTTTTTCAAAGTGACAAACCCGGCAGGCTTGT
CGGTTATTGGCACCTCAAGACCTTACAGCATACCCGGCCAATTACCTGCG
TACGGTGTCGTCTTTGACATTGCGCCGGATGTAGATGACCCAGCCGGAAG
TCATGATTATGAAGACATCGACGCACAAACAGACACCGGAGTGTTATCTG
CACGCTGGTTCGGCTTCAGTGATGATCCAGCGGCAGTTACCTATGAGGTG
GCAGTGGGTACTTCTTCTGGTACTCAGGACGTCCGACCCTTTACTCCTGT
CAGCGTGCCTCAAGTAAACAACATTGATGACTACGCCCCGAGACTCGATC
TCGTGACGAACACCACTCTCTCCGACCAATACTGCGCTCAGAACCAAGGA
CCACCATCGACCAGCTACCTTTCGGTCGACCGGAATCTGTTTGCTTCCTG
GGACGGTGAGGATGAGGGCGGGATTTACGACTTCTCGGTGGGGCTTAGCA
GCACCAGCAGTACAAGCAGCCCTGACATCATGGCCTTCACCTCCACCACC
GCCATCCCGGAGCTCTGGTTCTCCCACCCACACATCAGCCAGAACTCTCT
ATTCCACCTCGTCATCAAGGCTGAAGATAGGGCGGGACGAACCACCACCA
AAGCTGTAGGTCCCATTGTTGTAGACATAACTCCGCCTCAGTTTGTGGGA
CAAATATCGCTGTCAAAGGAAGGGAATTATCTAGTAGGGCGTTGGTCAGC
GAACGACTTCTATGACCAAGAAAGCCAGGACCCACTGCAATATCAATTCG
CTGTTGGACGTCACCCAAGCTCCGCTGACATGTCCAGTTTCCGCGATGTT
GAAACCAATGGTCCCTGCGTGAGCTCTCAACCTCCGAACTGTGCAGCGAT
TGAAACAGAAGCATTAGCCCTGCATCCAAGTGACAGTTACTACATGTTTT
TCAAAGTGACAAACCCGGCAGGCTTGTCGGTTATTGGCACCTCAAGACCT
TACAGCATACCCGGCCAATTACCTGCGTACGGTGTCGTCTTTGACATTGC
GCCGGATGTAGATGACCCAGCCGGAAGTCATGATTATGAAGACATCGACG
CACAAACAGACACCGGAGTGTTATCTGCACGCTGGTTCGGCTTCAGTGAT
GATCCAGCGGCAGTTACCTATGAGGTGGCAGTGGGTACTTCTTCTGGTAC
TCAGGACGTCCGACCCTTTACTCCTGTCAGCGTGCCTCAAGTAAACAACA
TTGATGACTACGCCCCGAGACTCGATCTCGTGACGAACACCACTCTCTCC
GACCAATACTGCGCTCAGAACCAAGGACCACCATCGACCAGCTACCTTTC
GGTCGACCGGAATCTGTTTGCTTCCTGGGACGGTGAGGATGAGGGCGGGA
TTTACGACTTCTCGGTGGGGCTTAGCAGCACCAGCAGTACAAGCAGCCCT
GACATCATGGCCTTCACCTCCACCACCGCCATCCCGGAGCTCTGGTTCTC
CCACCCACACATCAGCCAGAACTCTCTATTCCACCTCGTCATCAAGGCTG
AAGATAGGGCGGGACGAACCACCACCAAAGCTGTAGGTCCCATTGTTGTA
GACATAACTCCGCCTCAGTTTGTGGGACAAATATCGCTGTCAAAGGAAGG
GAATTATCTAGTAGGGCGTTGGTCAGCGAACGACTTCTATGACCAAGAAA
GCCAGGACCCACTGCAATATCAATTCGCTGTTGGACGTCACCCAAGCTCC
GCTGACATGTCCAGTTTCCGCGATGTTGAAACCAATGGTCCCTGCGTGAG
CTCTCAACCTCCGAACTGTGCAGCGATTGAAACAGAAGCATTAGCCCTGC
ATCCAAGTGACAGTTACTACATGTTTTTCAAAGTGACAAACCCGGCAGGC
TTGTCGGTTATTGGCACCTCAAGACCTTACAGCATACCCGGCCAATTACC
TGCGTACGGTGTCGTCTTTGACATTGCGCCGGATGTAGATGACCCAGCCG
GAAGTCATGATTATGAAGACATCGACGCACAAACAGACACCGGAGTGTTA
TCTGCACGCTGGTTCGGCTTCAGTGATGATCCAGCGGCAGTTACCTATGA
GGTGGCAGTGGGTACTTCTTCTGGTACTCAGGACGTCCGACCCTTTACTC
CTGTCAGCGTGCCTCAAGTAAACAACATTGATGACTACGCCCCGAGACTC
GATCTCGTGACGAACACCACTCTCTCCGACCAATACTGCGCTCAGAACCA
AGGACCACCATCGACCAGCTACCTTTCGGTCGACCGGAATCTGTTTGCTT
CCTGGGACGGTGAGGATGAGGGCGGGATTTACGACTTCTCGGTGGGGCTT
AGCAGCACCAGCAGTACAAGCAGCCCTGACATCATGGCCTTCACCTCCAC
CACCGCCATCCCGGAGCTCTGGTTCTCCCACCCACACATCAGCCAGAACT
CTCTATTCCACCTCGTCATCAAGGCTGAAGATAGGGCGGGACGAACCACC
ACCAAAGCTGTAGGTCCCATTGTTGTAGACATAACTCCGCCTCAGTTTGT
GGGACAAATATCGCTGTCAAAGGAAGGGAATTATCTAGTAGGGCGTTGGT
CAGCGAACGACTTCTATGACCAAGAAAGCCAGGACCCACTGCAATATCAA
TTCGCTGTTGGACGTCACCCAAGCTCCGCTGACATGTCCAGTTTCCGCGA
TGTTGAAACCAATGGTCCCTGCGTGAGCTCTCAACCTCCGAACTGTGCAG
CGATTGAAACAGAAGCATTAGCCCTGCATCCAAGTGACAGTTACTACATG
TTTTTCAAAGTGACAAACCCGGCAGGCTTGTCGGTTATTGGCACCTCAAG
ACCTTACAGCATACCCGGCCAATTACCTGCGTACGGTGTCGTCTTTGACA
TTGCGCCGGATGTAGATGACCCAGCCGGAAGTCATGATTATGAAGACATC
GACGCACAAACAGACACCGGAGTGTTATCTGCACGCTGGTTCGGCTTCAG
TGATGATCCAGCGGCAGTTACCTATGAGGTGGCAGTGGGTACTTCTTCTG
GTACTCAGGACGTCCGACCCTTTACTCCTGTCAGC
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
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| Sc0000014 | genome | Sc0000014:2295568..2297711 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL96930_cuf1 |
| Biotype | protein_coding |
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