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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL96928_cuf2 >transcript:BL96928_cuf2-protein ID=transcript:BL96928_cuf2-protein|Name=transcript:BL96928_cuf2|organism=Branchiostoma lanceolatum|type=polypeptide|length=434bp
DVNECDADPCHVNATCTNTDGSYTCTCKSGFRENGDNCEDIDECSFLGRC
PANSNCVNTIGSFRCDCDSGYTGPDCTEATTTPPQSTESSETTTTETVTR
TTTLNTFTGTVPTTTAAPTTPGPTAAPTTPGTTNEPTTPGTTEAPTTTEP
TPDIGWTNGQIVGNNSITYANGTTDYINSGWKVDSTIDEEISDAFAHTGH
QCWYYKSGTNNVNNPGPGDKTPFSPELSVKVGRSDGAYTGDADSFYVSFW
FKMAEDYSTRYGDGTRMMVVAGDPSGTTAASNHLEIDFPYRYRAKLSIRT
KESSPSYADCAQSKNCGDDFGGIYNTITDTLDPTTWHHVEMTLRSRPQDY
MDEWFYVIDGDTANPSQGGAFYKTQQYDEGRYLYTNRVSFIDISTRANLN
RNKGIYFDDINYKAYNSSNPSLIIDEYSTSFEPV Run BLAST on NCBI mRNA from alignment at Sc0000014:16861..18822+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL96928_cuf2 ID=transcript:BL96928_cuf2|Name=transcript:BL96928_cuf2|organism=Branchiostoma lanceolatum|type=mRNA|length=1962bp|location=Sequence derived from alignment at Sc0000014:16861..18822+ (Branchiostoma lanceolatum)
AGACGTCAACGAGTGTGATGCTGATCCTTGTCACGTAAACGCGACCTGCA
CCAACACTGACGGAAGTTACACCTGTACCTGCAAGTCAGGCTTCCGTGAG
AATGGAGATAACTGTGAAGGTAACTTAGTTTATGAGTAGATCTTTCAAGA
TTGACCTCAGCTGACACAGCGTTAGCATTGGATATCTAAAGTACAAGCGA
CGCAGCAAGCAATACTTTGGATGTAAATGAAACATGTATAAAGACAACCA
TGTTATGACAGGAATTGTCTACTCCATGTAGCAAATGGTGTGCAACTCTG
CCTTGAATACCAGTACAATTGTATTTGTGTATAAGAGAATAACTGACTGA
GAATGCATTTGTAACAGGATTGAACATTTTTTCTAAAGATGTTGAAAATT
ATTTTACAGACATAGACGAGTGTTCCTTCCTCGGTCGGTGCCCAGCCAAC
TCGAACTGCGTCAATACTATTGGCAGTTTCCGCTGCGATTGTGATTCCGG
ATACACTGGTCCCGATTGTACAGGTAATACATGGCATGTTTCTTTCATTA
CAGTAGGGATGGCTTAATCAAGGATCTCCCCTTTACCTTTACAAATCCCG
CCATGATCAGGTGGTCATAATATGATGTGTGTATTACAGACAGTATCGTT
ACGTGTCCAGTAACCTATGATCATATGAATCCGGCACAAATCTCATGACC
TGTTGGTTGTACTTGTATTCAAGATACTTATGATGTAGTAACGTTCCTTC
TATTTTTAAGACTGCTAACACCACGTCTGTATCCCAGATACAAAGTTATT
ATGATCTCCCGAGCTTTAATCAATGCCATAACCAAACCGTGTTGTCATTT
CTTAGAAGCTACTACCACGCCTCCGCAATCTACCGAAAGTTCCGAAACAA
CAACCACTGAAACAGTGACAAGGACAACAACCTTGAACACCTTCACTGGT
ACCGTGCCGACAACAACGGCGGCGCCAACAACACCTGGACCAACGGCGGC
GCCAACAACACCAGGAACAACGAATGAACCAACAACACCAGGGACAACGG
AAGCGCCAACAACCACAGAGCCAACACCAGACATCGGCTGGACAAATGGG
CAAATCGTTGGAAACAATAGCATCACCTACGCCAACGGCACTACCGACTA
TATAAACAGCGGCTGGAAAGTAGATTCCACAATTGATGAAGAAATCAGTG
ACGCCTTCGCTCACACAGGACATCAGTGTTGGTACTACAAGAGTGGTACA
AACAACGTTAATAATCCCGGGCCCGGAGACAAAACACCCTTCTCTCCCGA
ACTCAGCGTCAAAGTCGGACGGTCGGACGGCGCCTACACTGGCGACGCGG
ACTCGTTCTACGTGTCCTTCTGGTTCAAGATGGCGGAGGATTACAGCACC
AGATACGGAGACGGGACTCGCATGATGGTCGTAGCAGGAGACCCAAGTGG
TACCACCGCCGCGTCTAACCACCTAGAGATCGATTTTCCCTACCGTTACC
GTGCCAAGTTATCGATCCGTACCAAGGAAAGCTCTCCTAGTTACGCCGAC
TGCGCACAGAGTAAGAATTGTGGCGATGACTTCGGCGGCATCTACAACAC
GATTACCGATACCCTCGACCCCACCACCTGGCACCATGTAGAGATGACCC
TCCGCTCACGGCCTCAGGACTACATGGACGAATGGTTCTATGTGATCGAC
GGGGACACGGCCAACCCATCGCAAGGTGGCGCTTTTTACAAAACCCAGCA
GTACGACGAAGGTCGCTACTTGTACACCAATAGGGTGTCATTCATTGACA
TCAGCACTAGGGCCAATCTCAACAGAAACAAAGGAATCTACTTTGATGAC
ATCAACTACAAAGCCTACAATTCCTCCAATCCCAGCTTGATTATTGACGA
ATACAGTACGTCTTTTGAACCAGTGTAGAAAATCGAACTGCAGTTATTAG
TAGATTGGAAGA Coding sequence (CDS) from alignment at Sc0000014:16861..18822+ >transcript:BL96928_cuf2 ID=transcript:BL96928_cuf2|Name=transcript:BL96928_cuf2|organism=Branchiostoma lanceolatum|type=CDS|length=3915bp|location=Sequence derived from alignment at Sc0000014:16861..18822+ (Branchiostoma lanceolatum)
GACGTCAACGAGTGTGATGCTGATCCTTGTCACGTAAACGCGACCTGCAC
CAACACTGACGGAAGTTACACCTGTACCTGCAAGTCAGGCTTCCGTGAGA
ATGGAGATAACTGTGAAGACATAGACGAGTGTTCCTTCCTCGGTCGGTGC
CCAGCCAACTCGAACTGCGTCAATACTATTGGCAGTTTCCGCTGCGATTG
TGATTCCGGATACACTGGTCCCGATTGTACAGAAGCTACTACCACGCCTC
CGCAATCTACCGAAAGTTCCGAAACAACAACCACTGAAACAGTGACAAGG
ACAACAACCTTGAACACCTTCACTGGTACCGTGCCGACAACAACGGCGGC
GCCAACAACACCTGGACCAACGGCGGCGCCAACAACACCAGGAACAACGA
ATGAACCAACAACACCAGGGACAACGGAAGCGCCAACAACCACAGAGCCA
ACACCAGACATCGGCTGGACAAATGGGCAAATCGTTGGAAACAATAGCAT
CACCTACGCCAACGGCACTACCGACTATATAAACAGCGGCTGGAAAGTAG
ATTCCACAATTGATGAAGAAATCAGTGACGCCTTCGCTCACACAGGACAT
CAGTGTTGGTACTACAAGAGTGGTACAAACAACGTTAATAATCCCGGGCC
CGGAGACAAAACACCCTTCTCTCCCGAACTCAGCGTCAAAGTCGGACGGT
CGGACGGCGCCTACACTGGCGACGCGGACTCGTTCTACGTGTCCTTCTGG
TTCAAGATGGCGGAGGATTACAGCACCAGATACGGAGACGGGACTCGCAT
GATGGTCGTAGCAGGAGACCCAAGTGGTACCACCGCCGCGTCTAACCACC
TAGAGATCGATTTTCCCTACCGTTACCGTGCCAAGTTATCGATCCGTACC
AAGGAAAGCTCTCCTAGTTACGCCGACTGCGCACAGAGTAAGAATTGTGG
CGATGACTTCGGCGGCATCTACAACACGATTACCGATACCCTCGACCCCA
CCACCTGGCACCATGTAGAGATGACCCTCCGCTCACGGCCTCAGGACTAC
ATGGACGAATGGTTCTATGTGATCGACGGGGACACGGCCAACCCATCGCA
AGGTGGCGCTTTTTACAAAACCCAGCAGTACGACGAAGGTCGCTACTTGT
ACACCAATAGGGTGTCATTCATTGACATCAGCACTAGGGCCAATCTCAAC
AGAAACAAAGGAATCTACTTTGATGACATCAACTACAAAGCCTACAATTC
CTCCAATCCCAGCTTGATTATTGACGAATACAGTACGTCTTTTGAACCAG
TGTAGGACGTCAACGAGTGTGATGCTGATCCTTGTCACGTAAACGCGACC
TGCACCAACACTGACGGAAGTTACACCTGTACCTGCAAGTCAGGCTTCCG
TGAGAATGGAGATAACTGTGAAGACATAGACGAGTGTTCCTTCCTCGGTC
GGTGCCCAGCCAACTCGAACTGCGTCAATACTATTGGCAGTTTCCGCTGC
GATTGTGATTCCGGATACACTGGTCCCGATTGTACAGAAGCTACTACCAC
GCCTCCGCAATCTACCGAAAGTTCCGAAACAACAACCACTGAAACAGTGA
CAAGGACAACAACCTTGAACACCTTCACTGGTACCGTGCCGACAACAACG
GCGGCGCCAACAACACCTGGACCAACGGCGGCGCCAACAACACCAGGAAC
AACGAATGAACCAACAACACCAGGGACAACGGAAGCGCCAACAACCACAG
AGCCAACACCAGACATCGGCTGGACAAATGGGCAAATCGTTGGAAACAAT
AGCATCACCTACGCCAACGGCACTACCGACTATATAAACAGCGGCTGGAA
AGTAGATTCCACAATTGATGAAGAAATCAGTGACGCCTTCGCTCACACAG
GACATCAGTGTTGGTACTACAAGAGTGGTACAAACAACGTTAATAATCCC
GGGCCCGGAGACAAAACACCCTTCTCTCCCGAACTCAGCGTCAAAGTCGG
ACGGTCGGACGGCGCCTACACTGGCGACGCGGACTCGTTCTACGTGTCCT
TCTGGTTCAAGATGGCGGAGGATTACAGCACCAGATACGGAGACGGGACT
CGCATGATGGTCGTAGCAGGAGACCCAAGTGGTACCACCGCCGCGTCTAA
CCACCTAGAGATCGATTTTCCCTACCGTTACCGTGCCAAGTTATCGATCC
GTACCAAGGAAAGCTCTCCTAGTTACGCCGACTGCGCACAGAGTAAGAAT
TGTGGCGATGACTTCGGCGGCATCTACAACACGATTACCGATACCCTCGA
CCCCACCACCTGGCACCATGTAGAGATGACCCTCCGCTCACGGCCTCAGG
ACTACATGGACGAATGGTTCTATGTGATCGACGGGGACACGGCCAACCCA
TCGCAAGGTGGCGCTTTTTACAAAACCCAGCAGTACGACGAAGGTCGCTA
CTTGTACACCAATAGGGTGTCATTCATTGACATCAGCACTAGGGCCAATC
TCAACAGAAACAAAGGAATCTACTTTGATGACATCAACTACAAAGCCTAC
AATTCCTCCAATCCCAGCTTGATTATTGACGAATACAGTACGTCTTTTGA
ACCAGTGTAGGACGTCAACGAGTGTGATGCTGATCCTTGTCACGTAAACG
CGACCTGCACCAACACTGACGGAAGTTACACCTGTACCTGCAAGTCAGGC
TTCCGTGAGAATGGAGATAACTGTGAAGACATAGACGAGTGTTCCTTCCT
CGGTCGGTGCCCAGCCAACTCGAACTGCGTCAATACTATTGGCAGTTTCC
GCTGCGATTGTGATTCCGGATACACTGGTCCCGATTGTACAGAAGCTACT
ACCACGCCTCCGCAATCTACCGAAAGTTCCGAAACAACAACCACTGAAAC
AGTGACAAGGACAACAACCTTGAACACCTTCACTGGTACCGTGCCGACAA
CAACGGCGGCGCCAACAACACCTGGACCAACGGCGGCGCCAACAACACCA
GGAACAACGAATGAACCAACAACACCAGGGACAACGGAAGCGCCAACAAC
CACAGAGCCAACACCAGACATCGGCTGGACAAATGGGCAAATCGTTGGAA
ACAATAGCATCACCTACGCCAACGGCACTACCGACTATATAAACAGCGGC
TGGAAAGTAGATTCCACAATTGATGAAGAAATCAGTGACGCCTTCGCTCA
CACAGGACATCAGTGTTGGTACTACAAGAGTGGTACAAACAACGTTAATA
ATCCCGGGCCCGGAGACAAAACACCCTTCTCTCCCGAACTCAGCGTCAAA
GTCGGACGGTCGGACGGCGCCTACACTGGCGACGCGGACTCGTTCTACGT
GTCCTTCTGGTTCAAGATGGCGGAGGATTACAGCACCAGATACGGAGACG
GGACTCGCATGATGGTCGTAGCAGGAGACCCAAGTGGTACCACCGCCGCG
TCTAACCACCTAGAGATCGATTTTCCCTACCGTTACCGTGCCAAGTTATC
GATCCGTACCAAGGAAAGCTCTCCTAGTTACGCCGACTGCGCACAGAGTA
AGAATTGTGGCGATGACTTCGGCGGCATCTACAACACGATTACCGATACC
CTCGACCCCACCACCTGGCACCATGTAGAGATGACCCTCCGCTCACGGCC
TCAGGACTACATGGACGAATGGTTCTATGTGATCGACGGGGACACGGCCA
ACCCATCGCAAGGTGGCGCTTTTTACAAAACCCAGCAGTACGACGAAGGT
CGCTACTTGTACACCAATAGGGTGTCATTCATTGACATCAGCACTAGGGC
CAATCTCAACAGAAACAAAGGAATCTACTTTGATGACATCAACTACAAAG
CCTACAATTCCTCCAATCCCAGCTTGATTATTGACGAATACAGTACGTCT
TTTGAACCAGTGTAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000014 | genome | Sc0000014:16861..18822 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL96928_cuf2 |
| Biotype | protein_coding |
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