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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL96917_cuf8 >transcript:BL96917_cuf8-protein ID=transcript:BL96917_cuf8-protein|Name=transcript:BL96917_cuf8|organism=Branchiostoma lanceolatum|type=polypeptide|length=200bp
QCPGTKEVITNSKTLPSRTTYILDGLQPYSTYEISLSARTIVGPGPMVSR
SVTTLTTAPSGPPTNVTIDEVLITSILVSWLPPPCPESNGVIIQYGVSVV
PLDTGNEREVPDVMTRNTRMSVSGLRPSAWCGVRVRAYTDVGPGPYSPKV
NITTLTMNCSKGTFGVFCELTCHCLGGEACDRFNGSCSAACAAGWTGADC Run BLAST on NCBI mRNA from alignment at Sc0000014:3002151..3003884- Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL96917_cuf8 ID=transcript:BL96917_cuf8|Name=transcript:BL96917_cuf8|organism=Branchiostoma lanceolatum|type=mRNA|length=1734bp|location=Sequence derived from alignment at Sc0000014:3002151..3003884- (Branchiostoma lanceolatum)
CCAGTGTCCCGGTACTAAGGAGGTCATAACGAACTCAAAGGTAAATCTAG
CCGATCCGACTGTTGGAGGGCTTGTCTTGCTTGCAGTCTTATACATTAGC
CTTTATAGGGCTAATGTATAAGAGAAGAGAAGCCCTCCAACAGTCTCCTA
GGCAAAGGTAAATAGAGAATTAAGATTAGAAGTTTTATGGGAAAATGATA
AAACAAAGACATCACAACGTGAAGCATCAAGACCAACTGTGTCCGTTTCA
GCACCAAGGATAGATACAATCGAACTGCTGTATTTAGATTCTGTAATATC
TGAGAAGTTATGTGTCATCAGCTGAGGAAATGCACCCATTCGTGTTTCTA
GTTCTGTTAATTTGAATGGAAAATGCTTCATAAGCCACGGATGTCATTTT
GTACCAGCCCATTCTATCAGCTGACGAAATGCACAAATTCGTGTTCCTGT
TAATTTTCGTGGAAAATGCGTCTAAAGCTACCAATTTCTTTTTGTATTAG
TCCTTTTGCTTGTATGTGCATTTCGATTATTTCCAGACATTGCCCAGCCG
GACAACGTACATACTTGACGGGCTGCAGCCGTACTCAACATACGAGATCT
CGCTGAGTGCACGAACTATCGTCGGCCCGGGCCCTATGGTGTCCAGGAGT
GTTACCACGCTAACAACAGGTACGTCGCATTTTCCTTCAGCACTAGATCG
ATCTGTTACTTTACCCCTACTTATGCTTCGGTCACATTTGCGCCGGTACC
TGTAGGAGGTGTAGCCCTGTCCGGGCCCTTCTCACGATTAGCTTACGGCG
TCTATTTGTTACCGGGTCCCACGTTAATTCTAAGTTCGAGCTGAAATGAT
TCGGGGTCCCAGTCGGGCCCCAAAATAGCCCGGCAACCGCAGGGTGTCCC
ATGTGACCACGCCCAAATTGCAAAAAAAAGCAGCCCGTCAACTACCCGGC
GGGCCCCTTTCCCAATTGTGACTTAAGTATTAATCAGTGACATGATGTGT
CTTTTCTTGATATAATAACTTAAAGACACCCTTAAGAAAGGTGTTCTATG
TTACCCTTGAAACTACATTCTCTTCTTCGCCTCAGCACCAAGCGGTCCCC
CAACCAACGTCACAATCGACGAGGTCCTCATCACTAGTATCCTGGTTTCC
TGGTTACCACCTCCCTGCCCTGAGTCCAACGGCGTCATCATCCAATATGG
CGTCTCTGTGGTACCGTTGGACACTGGGAACGAGAGGGAAGTCCCGGATG
TGATGACGAGGAACACGCGGATGAGCGTCTCGGGCCTGAGGCCCAGTGCG
TGGTGTGGTGTGAGAGTCAGGGCGTACACAGACGTCGGGCCTGGCCCATA
CAGCCCTAAGGTTAACATCACCACCCTAACAATGAGTACGTATTCTCTGA
TGTTTCATATTTACCATTTTTGTATGTGCGCTATGGGCTCTTTCTTTTTG
TACAATACGTTTTGAAAATTAATAAAAAGAGTTTGAAAATAATTACAATG
TGAAGTCGATTCAGTGATTTACATATGAAAACTAAGGCAACTATTTCCTG
CAAAACTCAACTTTCTAACCAAAGAATATGTAACCCTTCTTTCTTTTTCT
AAAGACTGCAGCAAGGGTACCTTCGGCGTTTTCTGTGAGTTGACGTGCCA
CTGCCTCGGCGGGGAAGCGTGCGACCGGTTCAACGGCTCCTGCTCGGCGG
CATGCGCGGCTGGGTGGACCGGGGCCGACTGCCA Coding sequence (CDS) from alignment at Sc0000014:3002151..3003884- >transcript:BL96917_cuf8 ID=transcript:BL96917_cuf8|Name=transcript:BL96917_cuf8|organism=Branchiostoma lanceolatum|type=CDS|length=2400bp|location=Sequence derived from alignment at Sc0000014:3002151..3003884- (Branchiostoma lanceolatum)
CAGTGTCCCGGTACTAAGGAGGTCATAACGAACTCAAAGACATTGCCCAG
CCGGACAACGTACATACTTGACGGGCTGCAGCCGTACTCAACATACGAGA
TCTCGCTGAGTGCACGAACTATCGTCGGCCCGGGCCCTATGGTGTCCAGG
AGTGTTACCACGCTAACAACAGCACCAAGCGGTCCCCCAACCAACGTCAC
AATCGACGAGGTCCTCATCACTAGTATCCTGGTTTCCTGGTTACCACCTC
CCTGCCCTGAGTCCAACGGCGTCATCATCCAATATGGCGTCTCTGTGGTA
CCGTTGGACACTGGGAACGAGAGGGAAGTCCCGGATGTGATGACGAGGAA
CACGCGGATGAGCGTCTCGGGCCTGAGGCCCAGTGCGTGGTGTGGTGTGA
GAGTCAGGGCGTACACAGACGTCGGGCCTGGCCCATACAGCCCTAAGGTT
AACATCACCACCCTAACAATGAACTGCAGCAAGGGTACCTTCGGCGTTTT
CTGTGAGTTGACGTGCCACTGCCTCGGCGGGGAAGCGTGCGACCGGTTCA
ACGGCTCCTGCTCGGCGGCATGCGCGGCTGGGTGGACCGGGGCCGACTGC
CAGTGTCCCGGTACTAAGGAGGTCATAACGAACTCAAAGACATTGCCCAG
CCGGACAACGTACATACTTGACGGGCTGCAGCCGTACTCAACATACGAGA
TCTCGCTGAGTGCACGAACTATCGTCGGCCCGGGCCCTATGGTGTCCAGG
AGTGTTACCACGCTAACAACAGCACCAAGCGGTCCCCCAACCAACGTCAC
AATCGACGAGGTCCTCATCACTAGTATCCTGGTTTCCTGGTTACCACCTC
CCTGCCCTGAGTCCAACGGCGTCATCATCCAATATGGCGTCTCTGTGGTA
CCGTTGGACACTGGGAACGAGAGGGAAGTCCCGGATGTGATGACGAGGAA
CACGCGGATGAGCGTCTCGGGCCTGAGGCCCAGTGCGTGGTGTGGTGTGA
GAGTCAGGGCGTACACAGACGTCGGGCCTGGCCCATACAGCCCTAAGGTT
AACATCACCACCCTAACAATGAACTGCAGCAAGGGTACCTTCGGCGTTTT
CTGTGAGTTGACGTGCCACTGCCTCGGCGGGGAAGCGTGCGACCGGTTCA
ACGGCTCCTGCTCGGCGGCATGCGCGGCTGGGTGGACCGGGGCCGACTGC
CAGTGTCCCGGTACTAAGGAGGTCATAACGAACTCAAAGACATTGCCCAG
CCGGACAACGTACATACTTGACGGGCTGCAGCCGTACTCAACATACGAGA
TCTCGCTGAGTGCACGAACTATCGTCGGCCCGGGCCCTATGGTGTCCAGG
AGTGTTACCACGCTAACAACAGCACCAAGCGGTCCCCCAACCAACGTCAC
AATCGACGAGGTCCTCATCACTAGTATCCTGGTTTCCTGGTTACCACCTC
CCTGCCCTGAGTCCAACGGCGTCATCATCCAATATGGCGTCTCTGTGGTA
CCGTTGGACACTGGGAACGAGAGGGAAGTCCCGGATGTGATGACGAGGAA
CACGCGGATGAGCGTCTCGGGCCTGAGGCCCAGTGCGTGGTGTGGTGTGA
GAGTCAGGGCGTACACAGACGTCGGGCCTGGCCCATACAGCCCTAAGGTT
AACATCACCACCCTAACAATGAACTGCAGCAAGGGTACCTTCGGCGTTTT
CTGTGAGTTGACGTGCCACTGCCTCGGCGGGGAAGCGTGCGACCGGTTCA
ACGGCTCCTGCTCGGCGGCATGCGCGGCTGGGTGGACCGGGGCCGACTGC
CAGTGTCCCGGTACTAAGGAGGTCATAACGAACTCAAAGACATTGCCCAG
CCGGACAACGTACATACTTGACGGGCTGCAGCCGTACTCAACATACGAGA
TCTCGCTGAGTGCACGAACTATCGTCGGCCCGGGCCCTATGGTGTCCAGG
AGTGTTACCACGCTAACAACAGCACCAAGCGGTCCCCCAACCAACGTCAC
AATCGACGAGGTCCTCATCACTAGTATCCTGGTTTCCTGGTTACCACCTC
CCTGCCCTGAGTCCAACGGCGTCATCATCCAATATGGCGTCTCTGTGGTA
CCGTTGGACACTGGGAACGAGAGGGAAGTCCCGGATGTGATGACGAGGAA
CACGCGGATGAGCGTCTCGGGCCTGAGGCCCAGTGCGTGGTGTGGTGTGA
GAGTCAGGGCGTACACAGACGTCGGGCCTGGCCCATACAGCCCTAAGGTT
AACATCACCACCCTAACAATGAACTGCAGCAAGGGTACCTTCGGCGTTTT
CTGTGAGTTGACGTGCCACTGCCTCGGCGGGGAAGCGTGCGACCGGTTCA
ACGGCTCCTGCTCGGCGGCATGCGCGGCTGGGTGGACCGGGGCCGACTGC
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000014 | genome | Sc0000014:3002151..3003884 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL96917_cuf8 |
| Biotype | protein_coding |
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