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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL96897_cuf0 >transcript:BL96897_cuf0-protein ID=transcript:BL96897_cuf0-protein|Name=transcript:BL96897_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=120bp
FLTDIDECSDGGLNTCRTDQICVNTAGSFHCDDCIVFHGKCYIVSDAMVT
FAEAEMKCAEQGGIHVTVRDQHTQDFLVQLLSVSNKDVWIGLTDQDVEGQ
FVWTDRTPLVYSNWAPGEPN Run BLAST on NCBI mRNA from alignment at Sc0000143:605789..606717- Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL96897_cuf0 ID=transcript:BL96897_cuf0|Name=transcript:BL96897_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=929bp|location=Sequence derived from alignment at Sc0000143:605789..606717- (Branchiostoma lanceolatum)
ACTTTCTCACAGACATAGATGAATGCAGTGATGGTGGTCTGAACACGTGT
AGGACGGATCAGATATGTGTCAACACAGCCGGCTCATTTCACTGTGATGG
TAACTTTTAATTGTCTACCTTACATTGTTGGCACTTGCAAATCATACTTG
TGGAAATTTTACTATTTTTTTTTGATTAAAATTACATTTAGTTATATTGT
TTAAACTTATGGAAAGATATGTAAGATGTATAACCCATACATTTACATGT
ACTATTAGTATACTAGATCTTTGAGTTACGAGGTTTGAAACTACTCATCA
TCTCATTATCTCGATATTGCAGACTGCATCGTGTTTCATGGGAAGTGCTA
CATCGTGTCAGACGCCATGGTAACATTCGCCGAGGCTGAGATGAAATGTG
CTGAACAGGGTGGAATTCATGTCACCGTCAGAGACCAGCATACTCAGGAC
TTTCTTGTCCAGCTGCTGTCCGTGTCCAACAAGGACGTGTGGATCGGTCT
GACTGACCAGGACGTGGAGGGTCAGTTCGTCTGGACTGATCGGACACCAC
TGGTCTACAGCAACTGGGCTCCAGGTGTGAAATGATTTTGTTTCGTGCAC
ATAAATTATATAGTATTTTTTTTCTTTTTTAAAGCCTTATTTTGAGAACA
AGTACCAATGACTGACACATGTCAACACCTCATCCCTCTACAAAAAAAAA
ATGACCTCCATGCAATGTACGAGAAACAAATTATGGATAACTACAAAAAG
TAAGTAAAAGTAAACCTAAAAAAAGTAAAAAGTAAAAAAATTCGTTATTG
GTACTATGGACGTAAAAAGTATAGTACCAAAAAAATTAAGCCTTTTCAAA
TGGTGAAATACTTCATTAAGTGTCACACATTAAGAAACATGTATGATGCG
TTGCTATATGTTGCAGGAGAACCAAACGG Coding sequence (CDS) from alignment at Sc0000143:605789..606717- >transcript:BL96897_cuf0 ID=transcript:BL96897_cuf0|Name=transcript:BL96897_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=1080bp|location=Sequence derived from alignment at Sc0000143:605789..606717- (Branchiostoma lanceolatum)
TTTCTCACAGACATAGATGAATGCAGTGATGGTGGTCTGAACACGTGTAG
GACGGATCAGATATGTGTCAACACAGCCGGCTCATTTCACTGTGATGACT
GCATCGTGTTTCATGGGAAGTGCTACATCGTGTCAGACGCCATGGTAACA
TTCGCCGAGGCTGAGATGAAATGTGCTGAACAGGGTGGAATTCATGTCAC
CGTCAGAGACCAGCATACTCAGGACTTTCTTGTCCAGCTGCTGTCCGTGT
CCAACAAGGACGTGTGGATCGGTCTGACTGACCAGGACGTGGAGGGTCAG
TTCGTCTGGACTGATCGGACACCACTGGTCTACAGCAACTGGGCTCCAGG
AGAACCAAACTTTCTCACAGACATAGATGAATGCAGTGATGGTGGTCTGA
ACACGTGTAGGACGGATCAGATATGTGTCAACACAGCCGGCTCATTTCAC
TGTGATGACTGCATCGTGTTTCATGGGAAGTGCTACATCGTGTCAGACGC
CATGGTAACATTCGCCGAGGCTGAGATGAAATGTGCTGAACAGGGTGGAA
TTCATGTCACCGTCAGAGACCAGCATACTCAGGACTTTCTTGTCCAGCTG
CTGTCCGTGTCCAACAAGGACGTGTGGATCGGTCTGACTGACCAGGACGT
GGAGGGTCAGTTCGTCTGGACTGATCGGACACCACTGGTCTACAGCAACT
GGGCTCCAGGAGAACCAAACTTTCTCACAGACATAGATGAATGCAGTGAT
GGTGGTCTGAACACGTGTAGGACGGATCAGATATGTGTCAACACAGCCGG
CTCATTTCACTGTGATGACTGCATCGTGTTTCATGGGAAGTGCTACATCG
TGTCAGACGCCATGGTAACATTCGCCGAGGCTGAGATGAAATGTGCTGAA
CAGGGTGGAATTCATGTCACCGTCAGAGACCAGCATACTCAGGACTTTCT
TGTCCAGCTGCTGTCCGTGTCCAACAAGGACGTGTGGATCGGTCTGACTG
ACCAGGACGTGGAGGGTCAGTTCGTCTGGACTGATCGGACACCACTGGTC
TACAGCAACTGGGCTCCAGGAGAACCAAAC
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000143 | genome | Sc0000143:605789..606717 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL96897_cuf0 |
| Biotype | protein_coding |
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