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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL96885_cuf1 >transcript:BL96885_cuf1-protein ID=transcript:BL96885_cuf1-protein|Name=transcript:BL96885_cuf1|organism=Branchiostoma lanceolatum|type=polypeptide|length=215bp
ANIPPVFNVTSEIRATVGQEYGLQLEATDDGSVTITVAQGPGSLNGSNYY TWTPSDTSNYTIQFLATDDVGASTSQTPDITVCACQNNGTCNFDTTLTAR SFGFAISTCNCQLGFVGDYCETDYNGCSVTPCYPGVNCTDAVAPLSHGAK EYTCGSCPAGMVGDGESCVDLDECLLASNDANVHQCKNATCFNEAPGYRC ECLSGYSMMADNRTC Run BLAST on NCBI mRNA from alignment at Sc0000241:12073..13335- Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL96885_cuf1 ID=transcript:BL96885_cuf1|Name=transcript:BL96885_cuf1|organism=Branchiostoma lanceolatum|type=mRNA|length=1263bp|location=Sequence derived from alignment at Sc0000241:12073..13335- (Branchiostoma lanceolatum) AGCGAACATCCCGCCGGTCTTCAATGTGACGTCAGAGATCCGGGCTACCG
TTGGTCAGGAGTACGGGCTGCAGCTGGAGGCTACAGACGACGGTTCGGTC
ACCATCACCGTCGCGCAGGGGCCGGGAAGTCTCAACGGCAGTAACTACTA
CACGTGAGTCATGCTCTTTTTTTGTCTTTTTATATGCGAAGACATGCAAT
ATGTAGAAACTGTAAAACATCATATCAGATTATTGTAATGAGGAAGACTC
TGTAGAAGCGAGTTCTGTCAACGTGCATTTTTCATGTATGACTATGAAGC
AGATTATTGAAACAGAATTTCAATACCCATTGAAAGATCAGGACGTTTAA
GAGCTATCTATCACATTGACACAGGTGGACGCCTTCCGACACGTCTAACT
ACACTATCCAGTTTCTGGCCACGGATGACGTCGGTGCCTCCACATCTCAG
ACCCCCGACATCACGGTGTGCGCATGTCAAAACAATGGTACCTGCAATTT
CGATACCACCCTGACGGCACGTAGCTTTGGGTTCGCCATCTCCACATGCA
ACTGTCAGCTCGGCTTCGTCGGCGACTACTGTGAGACGGACTACAACGGC
TGCTCTGTCACACCTTGCTATCCAGGTAGGTCGACTATACAGGTTGCACT
TTTTGTTCAATACTTCATTCTTTTTAATCCCTCCAATACAGCCTCTTTGG
CACTTGCCATTCATCCATTTACGGCCTTGATGCGTGCATACTTTGTTGAA
AACTGAATAATTGTGCAAGGTACATCAATTTCTGCGCGTACCAAAGCATG
GTCATCCAAGAGCAGGGAGACCATGCACAACATATATTTATCAACTGCGC
GAGAATATCCGGATGCGTGCTGCACCTTTGAAAACCTTCATAAAGCTATG
GAGGATATGGAAAGCCAGAGGAAAAGTGACAGACATCCGACATAGACAAC
AAGACAATGATGGTGATGATGACGATGAACAATTTATCAAGACTGACTCC
ATGATTCTCCAATCTTCCAGGTGTAAATTGTACCGATGCTGTCGCGCCTC
TGTCTCACGGTGCCAAGGAGTACACCTGCGGCAGCTGCCCAGCTGGCATG
GTGGGCGACGGGGAGTCCTGTGTGGATCTGGACGAGTGCCTCTTAGCCTC
TAACGACGCCAACGTGCACCAGTGTAAGAACGCCACCTGCTTCAACGAGG
CCCCTGGTTACCGCTGCGAGTGTCTGTCTGGGTACAGCATGATGGCTGAC
AACAGGACATGCA Coding sequence (CDS) from alignment at Sc0000241:12073..13335- >transcript:BL96885_cuf1 ID=transcript:BL96885_cuf1|Name=transcript:BL96885_cuf1|organism=Branchiostoma lanceolatum|type=CDS|length=1935bp|location=Sequence derived from alignment at Sc0000241:12073..13335- (Branchiostoma lanceolatum) GCGAACATCCCGCCGGTCTTCAATGTGACGTCAGAGATCCGGGCTACCGT TGGTCAGGAGTACGGGCTGCAGCTGGAGGCTACAGACGACGGTTCGGTCA CCATCACCGTCGCGCAGGGGCCGGGAAGTCTCAACGGCAGTAACTACTAC ACGTGGACGCCTTCCGACACGTCTAACTACACTATCCAGTTTCTGGCCAC GGATGACGTCGGTGCCTCCACATCTCAGACCCCCGACATCACGGTGTGCG CATGTCAAAACAATGGTACCTGCAATTTCGATACCACCCTGACGGCACGT AGCTTTGGGTTCGCCATCTCCACATGCAACTGTCAGCTCGGCTTCGTCGG CGACTACTGTGAGACGGACTACAACGGCTGCTCTGTCACACCTTGCTATC CAGGTGTAAATTGTACCGATGCTGTCGCGCCTCTGTCTCACGGTGCCAAG GAGTACACCTGCGGCAGCTGCCCAGCTGGCATGGTGGGCGACGGGGAGTC CTGTGTGGATCTGGACGAGTGCCTCTTAGCCTCTAACGACGCCAACGTGC ACCAGTGTAAGAACGCCACCTGCTTCAACGAGGCCCCTGGTTACCGCTGC GAGTGTCTGTCTGGGTACAGCATGATGGCTGACAACAGGACATGCGCGAA CATCCCGCCGGTCTTCAATGTGACGTCAGAGATCCGGGCTACCGTTGGTC AGGAGTACGGGCTGCAGCTGGAGGCTACAGACGACGGTTCGGTCACCATC ACCGTCGCGCAGGGGCCGGGAAGTCTCAACGGCAGTAACTACTACACGTG GACGCCTTCCGACACGTCTAACTACACTATCCAGTTTCTGGCCACGGATG ACGTCGGTGCCTCCACATCTCAGACCCCCGACATCACGGTGTGCGCATGT CAAAACAATGGTACCTGCAATTTCGATACCACCCTGACGGCACGTAGCTT TGGGTTCGCCATCTCCACATGCAACTGTCAGCTCGGCTTCGTCGGCGACT ACTGTGAGACGGACTACAACGGCTGCTCTGTCACACCTTGCTATCCAGGT GTAAATTGTACCGATGCTGTCGCGCCTCTGTCTCACGGTGCCAAGGAGTA CACCTGCGGCAGCTGCCCAGCTGGCATGGTGGGCGACGGGGAGTCCTGTG TGGATCTGGACGAGTGCCTCTTAGCCTCTAACGACGCCAACGTGCACCAG TGTAAGAACGCCACCTGCTTCAACGAGGCCCCTGGTTACCGCTGCGAGTG TCTGTCTGGGTACAGCATGATGGCTGACAACAGGACATGCGCGAACATCC CGCCGGTCTTCAATGTGACGTCAGAGATCCGGGCTACCGTTGGTCAGGAG TACGGGCTGCAGCTGGAGGCTACAGACGACGGTTCGGTCACCATCACCGT CGCGCAGGGGCCGGGAAGTCTCAACGGCAGTAACTACTACACGTGGACGC CTTCCGACACGTCTAACTACACTATCCAGTTTCTGGCCACGGATGACGTC GGTGCCTCCACATCTCAGACCCCCGACATCACGGTGTGCGCATGTCAAAA CAATGGTACCTGCAATTTCGATACCACCCTGACGGCACGTAGCTTTGGGT TCGCCATCTCCACATGCAACTGTCAGCTCGGCTTCGTCGGCGACTACTGT GAGACGGACTACAACGGCTGCTCTGTCACACCTTGCTATCCAGGTGTAAA TTGTACCGATGCTGTCGCGCCTCTGTCTCACGGTGCCAAGGAGTACACCT GCGGCAGCTGCCCAGCTGGCATGGTGGGCGACGGGGAGTCCTGTGTGGAT CTGGACGAGTGCCTCTTAGCCTCTAACGACGCCAACGTGCACCAGTGTAA GAACGCCACCTGCTTCAACGAGGCCCCTGGTTACCGCTGCGAGTGTCTGT CTGGGTACAGCATGATGGCTGACAACAGGACATGC
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
Sc0000241 | genome | Sc0000241:12073..13335 - |
Properties
Property Name | Value |
Transcript id | BL96885_cuf1 |
Biotype | protein_coding |
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