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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL96885_cuf1 >transcript:BL96885_cuf1-protein ID=transcript:BL96885_cuf1-protein|Name=transcript:BL96885_cuf1|organism=Branchiostoma lanceolatum|type=polypeptide|length=215bp
ANIPPVFNVTSEIRATVGQEYGLQLEATDDGSVTITVAQGPGSLNGSNYY
TWTPSDTSNYTIQFLATDDVGASTSQTPDITVCACQNNGTCNFDTTLTAR
SFGFAISTCNCQLGFVGDYCETDYNGCSVTPCYPGVNCTDAVAPLSHGAK
EYTCGSCPAGMVGDGESCVDLDECLLASNDANVHQCKNATCFNEAPGYRC
ECLSGYSMMADNRTC Run BLAST on NCBI mRNA from alignment at Sc0000241:12073..13335- Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL96885_cuf1 ID=transcript:BL96885_cuf1|Name=transcript:BL96885_cuf1|organism=Branchiostoma lanceolatum|type=mRNA|length=1263bp|location=Sequence derived from alignment at Sc0000241:12073..13335- (Branchiostoma lanceolatum)
AGCGAACATCCCGCCGGTCTTCAATGTGACGTCAGAGATCCGGGCTACCG
TTGGTCAGGAGTACGGGCTGCAGCTGGAGGCTACAGACGACGGTTCGGTC
ACCATCACCGTCGCGCAGGGGCCGGGAAGTCTCAACGGCAGTAACTACTA
CACGTGAGTCATGCTCTTTTTTTGTCTTTTTATATGCGAAGACATGCAAT
ATGTAGAAACTGTAAAACATCATATCAGATTATTGTAATGAGGAAGACTC
TGTAGAAGCGAGTTCTGTCAACGTGCATTTTTCATGTATGACTATGAAGC
AGATTATTGAAACAGAATTTCAATACCCATTGAAAGATCAGGACGTTTAA
GAGCTATCTATCACATTGACACAGGTGGACGCCTTCCGACACGTCTAACT
ACACTATCCAGTTTCTGGCCACGGATGACGTCGGTGCCTCCACATCTCAG
ACCCCCGACATCACGGTGTGCGCATGTCAAAACAATGGTACCTGCAATTT
CGATACCACCCTGACGGCACGTAGCTTTGGGTTCGCCATCTCCACATGCA
ACTGTCAGCTCGGCTTCGTCGGCGACTACTGTGAGACGGACTACAACGGC
TGCTCTGTCACACCTTGCTATCCAGGTAGGTCGACTATACAGGTTGCACT
TTTTGTTCAATACTTCATTCTTTTTAATCCCTCCAATACAGCCTCTTTGG
CACTTGCCATTCATCCATTTACGGCCTTGATGCGTGCATACTTTGTTGAA
AACTGAATAATTGTGCAAGGTACATCAATTTCTGCGCGTACCAAAGCATG
GTCATCCAAGAGCAGGGAGACCATGCACAACATATATTTATCAACTGCGC
GAGAATATCCGGATGCGTGCTGCACCTTTGAAAACCTTCATAAAGCTATG
GAGGATATGGAAAGCCAGAGGAAAAGTGACAGACATCCGACATAGACAAC
AAGACAATGATGGTGATGATGACGATGAACAATTTATCAAGACTGACTCC
ATGATTCTCCAATCTTCCAGGTGTAAATTGTACCGATGCTGTCGCGCCTC
TGTCTCACGGTGCCAAGGAGTACACCTGCGGCAGCTGCCCAGCTGGCATG
GTGGGCGACGGGGAGTCCTGTGTGGATCTGGACGAGTGCCTCTTAGCCTC
TAACGACGCCAACGTGCACCAGTGTAAGAACGCCACCTGCTTCAACGAGG
CCCCTGGTTACCGCTGCGAGTGTCTGTCTGGGTACAGCATGATGGCTGAC
AACAGGACATGCA Coding sequence (CDS) from alignment at Sc0000241:12073..13335- >transcript:BL96885_cuf1 ID=transcript:BL96885_cuf1|Name=transcript:BL96885_cuf1|organism=Branchiostoma lanceolatum|type=CDS|length=1935bp|location=Sequence derived from alignment at Sc0000241:12073..13335- (Branchiostoma lanceolatum)
GCGAACATCCCGCCGGTCTTCAATGTGACGTCAGAGATCCGGGCTACCGT
TGGTCAGGAGTACGGGCTGCAGCTGGAGGCTACAGACGACGGTTCGGTCA
CCATCACCGTCGCGCAGGGGCCGGGAAGTCTCAACGGCAGTAACTACTAC
ACGTGGACGCCTTCCGACACGTCTAACTACACTATCCAGTTTCTGGCCAC
GGATGACGTCGGTGCCTCCACATCTCAGACCCCCGACATCACGGTGTGCG
CATGTCAAAACAATGGTACCTGCAATTTCGATACCACCCTGACGGCACGT
AGCTTTGGGTTCGCCATCTCCACATGCAACTGTCAGCTCGGCTTCGTCGG
CGACTACTGTGAGACGGACTACAACGGCTGCTCTGTCACACCTTGCTATC
CAGGTGTAAATTGTACCGATGCTGTCGCGCCTCTGTCTCACGGTGCCAAG
GAGTACACCTGCGGCAGCTGCCCAGCTGGCATGGTGGGCGACGGGGAGTC
CTGTGTGGATCTGGACGAGTGCCTCTTAGCCTCTAACGACGCCAACGTGC
ACCAGTGTAAGAACGCCACCTGCTTCAACGAGGCCCCTGGTTACCGCTGC
GAGTGTCTGTCTGGGTACAGCATGATGGCTGACAACAGGACATGCGCGAA
CATCCCGCCGGTCTTCAATGTGACGTCAGAGATCCGGGCTACCGTTGGTC
AGGAGTACGGGCTGCAGCTGGAGGCTACAGACGACGGTTCGGTCACCATC
ACCGTCGCGCAGGGGCCGGGAAGTCTCAACGGCAGTAACTACTACACGTG
GACGCCTTCCGACACGTCTAACTACACTATCCAGTTTCTGGCCACGGATG
ACGTCGGTGCCTCCACATCTCAGACCCCCGACATCACGGTGTGCGCATGT
CAAAACAATGGTACCTGCAATTTCGATACCACCCTGACGGCACGTAGCTT
TGGGTTCGCCATCTCCACATGCAACTGTCAGCTCGGCTTCGTCGGCGACT
ACTGTGAGACGGACTACAACGGCTGCTCTGTCACACCTTGCTATCCAGGT
GTAAATTGTACCGATGCTGTCGCGCCTCTGTCTCACGGTGCCAAGGAGTA
CACCTGCGGCAGCTGCCCAGCTGGCATGGTGGGCGACGGGGAGTCCTGTG
TGGATCTGGACGAGTGCCTCTTAGCCTCTAACGACGCCAACGTGCACCAG
TGTAAGAACGCCACCTGCTTCAACGAGGCCCCTGGTTACCGCTGCGAGTG
TCTGTCTGGGTACAGCATGATGGCTGACAACAGGACATGCGCGAACATCC
CGCCGGTCTTCAATGTGACGTCAGAGATCCGGGCTACCGTTGGTCAGGAG
TACGGGCTGCAGCTGGAGGCTACAGACGACGGTTCGGTCACCATCACCGT
CGCGCAGGGGCCGGGAAGTCTCAACGGCAGTAACTACTACACGTGGACGC
CTTCCGACACGTCTAACTACACTATCCAGTTTCTGGCCACGGATGACGTC
GGTGCCTCCACATCTCAGACCCCCGACATCACGGTGTGCGCATGTCAAAA
CAATGGTACCTGCAATTTCGATACCACCCTGACGGCACGTAGCTTTGGGT
TCGCCATCTCCACATGCAACTGTCAGCTCGGCTTCGTCGGCGACTACTGT
GAGACGGACTACAACGGCTGCTCTGTCACACCTTGCTATCCAGGTGTAAA
TTGTACCGATGCTGTCGCGCCTCTGTCTCACGGTGCCAAGGAGTACACCT
GCGGCAGCTGCCCAGCTGGCATGGTGGGCGACGGGGAGTCCTGTGTGGAT
CTGGACGAGTGCCTCTTAGCCTCTAACGACGCCAACGTGCACCAGTGTAA
GAACGCCACCTGCTTCAACGAGGCCCCTGGTTACCGCTGCGAGTGTCTGT
CTGGGTACAGCATGATGGCTGACAACAGGACATGC
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000241 | genome | Sc0000241:12073..13335 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL96885_cuf1 |
| Biotype | protein_coding |
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