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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL96876_cuf3 >transcript:BL96876_cuf3-protein ID=transcript:BL96876_cuf3-protein|Name=transcript:BL96876_cuf3|organism=Branchiostoma lanceolatum|type=polypeptide|length=289bp
LTAPTNGTRTPPTGANSYQDTVTFTCNTGYDLDGAASVTCQADGKWSNPV
PICTLPPEVRIRPSEIQNLVIGETVTITCNTTGFPSDYNYQWTVDGTVVP
SQGGPVFRYKAVSGVHKIRCKVIGSGGEVESENSTVTVLPEGTMTFVSSI
RTTTRNFIPEMTDPNSAAFRRISIEIVDWYQQAVRRVQGQVSIRVKGLKP
GSVIATQNIYVQDSLLQDKDLYDSIYNALRTAAQSPSSLGVDPNNVTLLS
ATTCYGETVTVTDSSSSDVTLTFPSSAGDTHVYSTQRCA Run BLAST on NCBI mRNA from alignment at Sc0000007:6727038..6729858- Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL96876_cuf3 ID=transcript:BL96876_cuf3|Name=transcript:BL96876_cuf3|organism=Branchiostoma lanceolatum|type=mRNA|length=2821bp|location=Sequence derived from alignment at Sc0000007:6727038..6729858- (Branchiostoma lanceolatum)
TTGACGGCCCCAACTAACGGAACACGGACGCCCCCTACCGGTGCGAACTC
CTACCAGGACACGGTGACGTTCACCTGCAACACGGGATACGATCTGGACG
GAGCCGCTAGTGTGACGTGCCAAGCTGACGGAAAATGGAGTAATCCTGTA
CCAATATGCACACGTAAGACGACTTTTAACTATTGAATACTAACAACGAA
ACCTAATTTATACACTTGTGCTGAAACCTGTTTCTGGTGATTTCTGATTA
TATATCATAGTTTTCATGTTTGTAGATTTGACATTATTGGTTCTAAGATA
TACCCGGTATTTACCCGGTATATGGACATTGTATCAGTAAACATTGTAGT
TAGTAAGTGCAACTTGTCAAACTTCTAGAAGATGTTCAGTTCAATCAACC
TCCTTGGTTCAATATGACCTGACCTGTAACATATGATGATAGTATTTGAT
ATCATTATGGTATAAGAATTTCACATTGTAAACTAAAAATGTTCTTATTT
TGTATGTTTATAAAGTTCCCCCTGAGGTCAGAATACGCCCTTCAGAGATT
CAGAACCTGGTGATTGGAGAGACCGTCACCATCACATGTAACACCACAGG
GTTTCCCAGTGATTATAACTACCAGTGGACGGTGGATGGAACAGTCGTGC
CCAGCCAGGGAGGTCCTGTGTTCAGGTTTGTGTGTATTAAATTGTTCAAC
AAGTCTGCGTCTTCTCCATGAATTCAGTCGTGCATGATATGTATCATGGT
ATGTGTCATTTAGTTCAGAATTGGGAATTCCACTAAGAAATTAGATTTCT
TGATATTTTGTCTCTTAATATTTTCAAACGCTAGAGGCCCTCTTCAAACC
TCATGTAAAAGATCAAGTTCACAAATGGCCTATATACAAAGTTGCAACAT
AACAATTCTTGCATCATTCAATCGGGCGATGAAACAATCAATCAATCAGA
TTTTGTGTCTTGTATGTAAATCATACCATAGAAAATTTGCATAATCAGTG
ATTTCGTTGCCCGCATGTCTGCCTCCAGGTATAAAGCTGTTAGTGGAGTT
CACAAGATCAGGTGCAAAGTGATAGGTTCTGGTGGTGAGGTGGAGTCTGA
GAACAGCACTGTGACTGTGCTCCCCGAAGGTTCGTGTTCTTTCATAATCT
TACGAAAATCTTCATGGAAGCTTTATACAGTTATCCTTAGATTCTTTTAA
GTTGACAGGATCCACTTACCGGGGAAGACGACGAACCAGCTGGCCCAGGT
TCTACTGACGCCATTTTCCTCCCCCAACGTTAGCCTCGTTTTCGCGTACG
CTCGCGAGATCTCGTATGGGCGAGAATCTACGTGACTTGTATCCGGAAAT
AAAAGGGCCTATTATAACTGGTACATTACTGTATATGTAGGACACTATCA
ACAACTTATCTATTGGCAAGAACGGGCTCATTGCAACTTTAAAGCGGATC
AAAATATACTACAAACATTGTGCAGTTAAGTTTTTGTTTGTACCTCAGAT
AAAAAGTAGACAGATCTCTTTTAGAATAGACCTGAGCGATGAAGTGTCCG
GGGAGTCTACATTGTACAAACTATTTCCCCATAACTTTTCCAGGCACCAT
GACGTTTGTTTCCAGTATCAGGACAACTACCAGGAACTTCATTCCTGAGA
TGACAGACCCCAACTCAGCTGCTTTCCGGAGAATCAGTATCGAGATCGTA
GACTGGGTAGGACAACTGATCTCTGTATGATTTTGCTTATCCCGATGGAA
CTTTTAACTGTATGACATTGGTACAATCACCTTATGATCAATGATTTATA
TGAAAATGGATCCTGATTAGAGTTTCTTTACTCATTTTCCAGTATCAGCA
AGCTGTGAGACGTGTCCAGGGTCAGGTGTCAATCAGAGTAAAGGGCTTAA
AGTAAGTTTTGAGTAATTGGCAAAAAAATGTGATGACCTATTGTTATCGT
ATATTTGTTATATTTAGTAACAGTTACGCTACCTAACAAAGTTCTAAATT
ACCCCATGTGCAATTGAATAGATCGAGACTTTGCTTTTGACTGATCATCG
TTTATTTCTTGCAGACCAGGAAGTGTCATTGCAACTCAGAACATATATGT
GCAGGATTCTTTGCTCCAAGACAAGGATCTGTATGACAGTATCTACAACG
CCCTGAGAACAGCTGCCCAGTCTCCTAGCTCTCTTGGGGTGGATCCAAAC
AATGTGACACTCTTAAGTGCAAGTATGCCATTCCATTCCCGTTTGATCTT
AGGTACGAAACGACTAATTTAGAAATTACCCCTGAAAACTCGAAGTCAGC
AATAGATAAAATTTTCCCATTGTTGAAATCATGCAATAAGAAATGTATGT
GCAGACAGATCTAGCGTCTTAAGGGACCTGTTGGAAAAAGTCACATTAAA
CAGGTTGTCACAATGCAGACGGGCCTCTTAATGTTCAATGTCAATGTGAA
AAATAGAATAATAGATACTGAAATTGGCCACAATGATCAGGTGGTTCCTA
GCCAGAAGTAGTCTCTACTGCATTACTGCTTGCGCAAGTAAGTTGTTCAG
CCTTTTCTATAACTTAATTGAATGACAGGACAGGCCCACTGGCTCTCGCA
GTGCCTGAAGCACTGTTATTTCATGATCTGAGACATGTTCCTCTGGACGA
ATGCAGTTACAATCTACTATTAAGATATGCCATCAGAAATGTATCTTTGT
CCCACAGCAACATGTTACGGTGAAACGGTGACTGTGACAGACTCATCTTC
GAGTGATGTGACCTTGACTTTCCCGAGCTCTGCAGGGGACACGCACGTGT
ACTCAACTCAAAGGTGTGCAG Coding sequence (CDS) from alignment at Sc0000007:6727038..6729858- >transcript:BL96876_cuf3 ID=transcript:BL96876_cuf3|Name=transcript:BL96876_cuf3|organism=Branchiostoma lanceolatum|type=CDS|length=6069bp|location=Sequence derived from alignment at Sc0000007:6727038..6729858- (Branchiostoma lanceolatum)
TTGACGGCCCCAACTAACGGAACACGGACGCCCCCTACCGGTGCGAACTC
CTACCAGGACACGGTGACGTTCACCTGCAACACGGGATACGATCTGGACG
GAGCCGCTAGTGTGACGTGCCAAGCTGACGGAAAATGGAGTAATCCTGTA
CCAATATGCACACTTCCCCCTGAGGTCAGAATACGCCCTTCAGAGATTCA
GAACCTGGTGATTGGAGAGACCGTCACCATCACATGTAACACCACAGGGT
TTCCCAGTGATTATAACTACCAGTGGACGGTGGATGGAACAGTCGTGCCC
AGCCAGGGAGGTCCTGTGTTCAGGTATAAAGCTGTTAGTGGAGTTCACAA
GATCAGGTGCAAAGTGATAGGTTCTGGTGGTGAGGTGGAGTCTGAGAACA
GCACTGTGACTGTGCTCCCCGAAGGCACCATGACGTTTGTTTCCAGTATC
AGGACAACTACCAGGAACTTCATTCCTGAGATGACAGACCCCAACTCAGC
TGCTTTCCGGAGAATCAGTATCGAGATCGTAGACTGGTATCAGCAAGCTG
TGAGACGTGTCCAGGGTCAGGTGTCAATCAGAGTAAAGGGCTTAAAACCA
GGAAGTGTCATTGCAACTCAGAACATATATGTGCAGGATTCTTTGCTCCA
AGACAAGGATCTGTATGACAGTATCTACAACGCCCTGAGAACAGCTGCCC
AGTCTCCTAGCTCTCTTGGGGTGGATCCAAACAATGTGACACTCTTAAGT
GCAACAACATGTTACGGTGAAACGGTGACTGTGACAGACTCATCTTCGAG
TGATGTGACCTTGACTTTCCCGAGCTCTGCAGGGGACACGCACGTGTACT
CAACTCAAAGGTGTGCATTGACGGCCCCAACTAACGGAACACGGACGCCC
CCTACCGGTGCGAACTCCTACCAGGACACGGTGACGTTCACCTGCAACAC
GGGATACGATCTGGACGGAGCCGCTAGTGTGACGTGCCAAGCTGACGGAA
AATGGAGTAATCCTGTACCAATATGCACACTTCCCCCTGAGGTCAGAATA
CGCCCTTCAGAGATTCAGAACCTGGTGATTGGAGAGACCGTCACCATCAC
ATGTAACACCACAGGGTTTCCCAGTGATTATAACTACCAGTGGACGGTGG
ATGGAACAGTCGTGCCCAGCCAGGGAGGTCCTGTGTTCAGGTATAAAGCT
GTTAGTGGAGTTCACAAGATCAGGTGCAAAGTGATAGGTTCTGGTGGTGA
GGTGGAGTCTGAGAACAGCACTGTGACTGTGCTCCCCGAAGGCACCATGA
CGTTTGTTTCCAGTATCAGGACAACTACCAGGAACTTCATTCCTGAGATG
ACAGACCCCAACTCAGCTGCTTTCCGGAGAATCAGTATCGAGATCGTAGA
CTGGTATCAGCAAGCTGTGAGACGTGTCCAGGGTCAGGTGTCAATCAGAG
TAAAGGGCTTAAAACCAGGAAGTGTCATTGCAACTCAGAACATATATGTG
CAGGATTCTTTGCTCCAAGACAAGGATCTGTATGACAGTATCTACAACGC
CCTGAGAACAGCTGCCCAGTCTCCTAGCTCTCTTGGGGTGGATCCAAACA
ATGTGACACTCTTAAGTGCAACAACATGTTACGGTGAAACGGTGACTGTG
ACAGACTCATCTTCGAGTGATGTGACCTTGACTTTCCCGAGCTCTGCAGG
GGACACGCACGTGTACTCAACTCAAAGGTGTGCATTGACGGCCCCAACTA
ACGGAACACGGACGCCCCCTACCGGTGCGAACTCCTACCAGGACACGGTG
ACGTTCACCTGCAACACGGGATACGATCTGGACGGAGCCGCTAGTGTGAC
GTGCCAAGCTGACGGAAAATGGAGTAATCCTGTACCAATATGCACACTTC
CCCCTGAGGTCAGAATACGCCCTTCAGAGATTCAGAACCTGGTGATTGGA
GAGACCGTCACCATCACATGTAACACCACAGGGTTTCCCAGTGATTATAA
CTACCAGTGGACGGTGGATGGAACAGTCGTGCCCAGCCAGGGAGGTCCTG
TGTTCAGGTATAAAGCTGTTAGTGGAGTTCACAAGATCAGGTGCAAAGTG
ATAGGTTCTGGTGGTGAGGTGGAGTCTGAGAACAGCACTGTGACTGTGCT
CCCCGAAGGCACCATGACGTTTGTTTCCAGTATCAGGACAACTACCAGGA
ACTTCATTCCTGAGATGACAGACCCCAACTCAGCTGCTTTCCGGAGAATC
AGTATCGAGATCGTAGACTGGTATCAGCAAGCTGTGAGACGTGTCCAGGG
TCAGGTGTCAATCAGAGTAAAGGGCTTAAAACCAGGAAGTGTCATTGCAA
CTCAGAACATATATGTGCAGGATTCTTTGCTCCAAGACAAGGATCTGTAT
GACAGTATCTACAACGCCCTGAGAACAGCTGCCCAGTCTCCTAGCTCTCT
TGGGGTGGATCCAAACAATGTGACACTCTTAAGTGCAACAACATGTTACG
GTGAAACGGTGACTGTGACAGACTCATCTTCGAGTGATGTGACCTTGACT
TTCCCGAGCTCTGCAGGGGACACGCACGTGTACTCAACTCAAAGGTGTGC
ATTGACGGCCCCAACTAACGGAACACGGACGCCCCCTACCGGTGCGAACT
CCTACCAGGACACGGTGACGTTCACCTGCAACACGGGATACGATCTGGAC
GGAGCCGCTAGTGTGACGTGCCAAGCTGACGGAAAATGGAGTAATCCTGT
ACCAATATGCACACTTCCCCCTGAGGTCAGAATACGCCCTTCAGAGATTC
AGAACCTGGTGATTGGAGAGACCGTCACCATCACATGTAACACCACAGGG
TTTCCCAGTGATTATAACTACCAGTGGACGGTGGATGGAACAGTCGTGCC
CAGCCAGGGAGGTCCTGTGTTCAGGTATAAAGCTGTTAGTGGAGTTCACA
AGATCAGGTGCAAAGTGATAGGTTCTGGTGGTGAGGTGGAGTCTGAGAAC
AGCACTGTGACTGTGCTCCCCGAAGGCACCATGACGTTTGTTTCCAGTAT
CAGGACAACTACCAGGAACTTCATTCCTGAGATGACAGACCCCAACTCAG
CTGCTTTCCGGAGAATCAGTATCGAGATCGTAGACTGGTATCAGCAAGCT
GTGAGACGTGTCCAGGGTCAGGTGTCAATCAGAGTAAAGGGCTTAAAACC
AGGAAGTGTCATTGCAACTCAGAACATATATGTGCAGGATTCTTTGCTCC
AAGACAAGGATCTGTATGACAGTATCTACAACGCCCTGAGAACAGCTGCC
CAGTCTCCTAGCTCTCTTGGGGTGGATCCAAACAATGTGACACTCTTAAG
TGCAACAACATGTTACGGTGAAACGGTGACTGTGACAGACTCATCTTCGA
GTGATGTGACCTTGACTTTCCCGAGCTCTGCAGGGGACACGCACGTGTAC
TCAACTCAAAGGTGTGCATTGACGGCCCCAACTAACGGAACACGGACGCC
CCCTACCGGTGCGAACTCCTACCAGGACACGGTGACGTTCACCTGCAACA
CGGGATACGATCTGGACGGAGCCGCTAGTGTGACGTGCCAAGCTGACGGA
AAATGGAGTAATCCTGTACCAATATGCACACTTCCCCCTGAGGTCAGAAT
ACGCCCTTCAGAGATTCAGAACCTGGTGATTGGAGAGACCGTCACCATCA
CATGTAACACCACAGGGTTTCCCAGTGATTATAACTACCAGTGGACGGTG
GATGGAACAGTCGTGCCCAGCCAGGGAGGTCCTGTGTTCAGGTATAAAGC
TGTTAGTGGAGTTCACAAGATCAGGTGCAAAGTGATAGGTTCTGGTGGTG
AGGTGGAGTCTGAGAACAGCACTGTGACTGTGCTCCCCGAAGGCACCATG
ACGTTTGTTTCCAGTATCAGGACAACTACCAGGAACTTCATTCCTGAGAT
GACAGACCCCAACTCAGCTGCTTTCCGGAGAATCAGTATCGAGATCGTAG
ACTGGTATCAGCAAGCTGTGAGACGTGTCCAGGGTCAGGTGTCAATCAGA
GTAAAGGGCTTAAAACCAGGAAGTGTCATTGCAACTCAGAACATATATGT
GCAGGATTCTTTGCTCCAAGACAAGGATCTGTATGACAGTATCTACAACG
CCCTGAGAACAGCTGCCCAGTCTCCTAGCTCTCTTGGGGTGGATCCAAAC
AATGTGACACTCTTAAGTGCAACAACATGTTACGGTGAAACGGTGACTGT
GACAGACTCATCTTCGAGTGATGTGACCTTGACTTTCCCGAGCTCTGCAG
GGGACACGCACGTGTACTCAACTCAAAGGTGTGCATTGACGGCCCCAACT
AACGGAACACGGACGCCCCCTACCGGTGCGAACTCCTACCAGGACACGGT
GACGTTCACCTGCAACACGGGATACGATCTGGACGGAGCCGCTAGTGTGA
CGTGCCAAGCTGACGGAAAATGGAGTAATCCTGTACCAATATGCACACTT
CCCCCTGAGGTCAGAATACGCCCTTCAGAGATTCAGAACCTGGTGATTGG
AGAGACCGTCACCATCACATGTAACACCACAGGGTTTCCCAGTGATTATA
ACTACCAGTGGACGGTGGATGGAACAGTCGTGCCCAGCCAGGGAGGTCCT
GTGTTCAGGTATAAAGCTGTTAGTGGAGTTCACAAGATCAGGTGCAAAGT
GATAGGTTCTGGTGGTGAGGTGGAGTCTGAGAACAGCACTGTGACTGTGC
TCCCCGAAGGCACCATGACGTTTGTTTCCAGTATCAGGACAACTACCAGG
AACTTCATTCCTGAGATGACAGACCCCAACTCAGCTGCTTTCCGGAGAAT
CAGTATCGAGATCGTAGACTGGTATCAGCAAGCTGTGAGACGTGTCCAGG
GTCAGGTGTCAATCAGAGTAAAGGGCTTAAAACCAGGAAGTGTCATTGCA
ACTCAGAACATATATGTGCAGGATTCTTTGCTCCAAGACAAGGATCTGTA
TGACAGTATCTACAACGCCCTGAGAACAGCTGCCCAGTCTCCTAGCTCTC
TTGGGGTGGATCCAAACAATGTGACACTCTTAAGTGCAACAACATGTTAC
GGTGAAACGGTGACTGTGACAGACTCATCTTCGAGTGATGTGACCTTGAC
TTTCCCGAGCTCTGCAGGGGACACGCACGTGTACTCAACTCAAAGGTGTG
CATTGACGGCCCCAACTAACGGAACACGGACGCCCCCTACCGGTGCGAAC
TCCTACCAGGACACGGTGACGTTCACCTGCAACACGGGATACGATCTGGA
CGGAGCCGCTAGTGTGACGTGCCAAGCTGACGGAAAATGGAGTAATCCTG
TACCAATATGCACACTTCCCCCTGAGGTCAGAATACGCCCTTCAGAGATT
CAGAACCTGGTGATTGGAGAGACCGTCACCATCACATGTAACACCACAGG
GTTTCCCAGTGATTATAACTACCAGTGGACGGTGGATGGAACAGTCGTGC
CCAGCCAGGGAGGTCCTGTGTTCAGGTATAAAGCTGTTAGTGGAGTTCAC
AAGATCAGGTGCAAAGTGATAGGTTCTGGTGGTGAGGTGGAGTCTGAGAA
CAGCACTGTGACTGTGCTCCCCGAAGGCACCATGACGTTTGTTTCCAGTA
TCAGGACAACTACCAGGAACTTCATTCCTGAGATGACAGACCCCAACTCA
GCTGCTTTCCGGAGAATCAGTATCGAGATCGTAGACTGGTATCAGCAAGC
TGTGAGACGTGTCCAGGGTCAGGTGTCAATCAGAGTAAAGGGCTTAAAAC
CAGGAAGTGTCATTGCAACTCAGAACATATATGTGCAGGATTCTTTGCTC
CAAGACAAGGATCTGTATGACAGTATCTACAACGCCCTGAGAACAGCTGC
CCAGTCTCCTAGCTCTCTTGGGGTGGATCCAAACAATGTGACACTCTTAA
GTGCAACAACATGTTACGGTGAAACGGTGACTGTGACAGACTCATCTTCG
AGTGATGTGACCTTGACTTTCCCGAGCTCTGCAGGGGACACGCACGTGTA
CTCAACTCAAAGGTGTGCA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
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| Sc0000007 | genome | Sc0000007:6727038..6729858 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL96876_cuf3 |
| Biotype | protein_coding |
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