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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL96869_cuf3 >transcript:BL96869_cuf3-protein ID=transcript:BL96869_cuf3-protein|Name=transcript:BL96869_cuf3|organism=Branchiostoma lanceolatum|type=polypeptide|length=135bp
IDFLDDNPSDDIACIAMGTDDLDENCQQGLSVPSFSYTIDHTQTSLPVLY
GGVDTPVVFNTTVRNDGGPPIPAGSQPNFHLQLYLAEQPALPSSPFADST
QINITYGNQATVLTNKIAPDGGHLTFTSLQAVVTI Run BLAST on NCBI mRNA from alignment at Sc0000007:180499..181922- Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL96869_cuf3 ID=transcript:BL96869_cuf3|Name=transcript:BL96869_cuf3|organism=Branchiostoma lanceolatum|type=mRNA|length=1424bp|location=Sequence derived from alignment at Sc0000007:180499..181922- (Branchiostoma lanceolatum)
ATATCGACTTCCTTGACGATAACCCATCCGATGACATTGCCTGTATCGCC
ATGGGAACGGATGACCTTGATGAGAATTGCCAACAAGGTCAGAGAACAGA
AATTACTCAAATTTTGGTCAAAAAGATAGATTCCACTAAAGTTTAAGTGA
TTTGGTGTAATATAGCATATATTATAATTTAAAAACAATTCAAACTGTAC
TACTTCTGGAAGTAAATCTCTGAATCTTTGGAAGTAGATCTGCAAATTTT
ATCCAGTTTTAGAGTTTGAATTGTCTTTATATATTGTTTACCAGGATCCC
TATCAATAATCATCATAAACAGCTCATAACTTTATATCTGTAGAATGAAA
TTGTGGAAGTATTAATAAAAAGTGATGAAAAATAGGAATTTTGGAAAAAG
ATATGGTAAATAGTCATATACTAACAGTCAAGGACAACATTTTCTTCAGA
TTTTGTGCCTTTTTTGTTAAACAGATTTTTAAACAGATTAATTTTTCGTT
GTCTGCCAAATTGTTACTTGCATATTGTCATTTTCTTTAATTAAGACAGG
GCATCTGCTCATTATGAACTCTTGACTTTGACAGTTTTCTTTTGTGTTTT
TTTTCCCATTCCAGGTTTGTCGGTGCCATCCTTCTCCTACACAATTGACC
ACACCCAGACAAGTCTGCCGGTTCTGTATGGAGGAGTGGACACACCTGTT
GTCTTCAACACAACCGTGCGCAACGATGGGGGACCGCCCATACCTGCCGG
CAGCCAGCCTAACTTCCACCTGCAACTGTACCTGGCTGAACAACCGGCTC
TTCCCAGCTCACCATTTGCAGGTTAGAGTACAGTTATTGTTGAATCTTTT
TGCAATTATTTGTAAACTTATAATGTATGTAACGAAGGAGGGCCGCCCAT
ACCTGCTAGCAGCCAGCCCAACTTCCTACTACAGCTGTACCTGGCTGAGA
AACTGGCTCTGCCCAGCTCACCATTTGCAGGTAAGAGTGCCAGAATTATC
AACCCAGGAGTGAAGCGTTCAAAAACTTTTTCCCAATAGAGCTATCGTAG
AGTGGAACTCGTCGCCACCTTGAGTACAGTAGGGGCTACTCACAAGATGG
CTTTAGGCAGCACACGTCTTGCAGTTAGATTTGCAAAGCTGGTTTGCTAC
GACGAATGGCAGTTATACTGGCTGATATGTAGATACAGATACATGTTGAA
ATGTTTAGAATTGCAATATAAGCTGATATGTAGATACAGATACAGATACA
TGTTGAAATGTTTAGAATTGCAATATATGACCCTCTTATTTTTTTGTTAA
TTGTTGCAGACTCCACACAGATCAACATCACCTATGGCAACCAGGCGACC
GTCCTGACCAATAAGATTGCTCCGGATGGAGGTCATTTGACCTTCACGTC
ACTCCAGGCTGTCGTCACGATCCC Coding sequence (CDS) from alignment at Sc0000007:180499..181922- >transcript:BL96869_cuf3 ID=transcript:BL96869_cuf3|Name=transcript:BL96869_cuf3|organism=Branchiostoma lanceolatum|type=CDS|length=1215bp|location=Sequence derived from alignment at Sc0000007:180499..181922- (Branchiostoma lanceolatum)
ATCGACTTCCTTGACGATAACCCATCCGATGACATTGCCTGTATCGCCAT
GGGAACGGATGACCTTGATGAGAATTGCCAACAAGGTTTGTCGGTGCCAT
CCTTCTCCTACACAATTGACCACACCCAGACAAGTCTGCCGGTTCTGTAT
GGAGGAGTGGACACACCTGTTGTCTTCAACACAACCGTGCGCAACGATGG
GGGACCGCCCATACCTGCCGGCAGCCAGCCTAACTTCCACCTGCAACTGT
ACCTGGCTGAACAACCGGCTCTTCCCAGCTCACCATTTGCAGACTCCACA
CAGATCAACATCACCTATGGCAACCAGGCGACCGTCCTGACCAATAAGAT
TGCTCCGGATGGAGGTCATTTGACCTTCACGTCACTCCAGGCTGTCGTCA
CGATCATCGACTTCCTTGACGATAACCCATCCGATGACATTGCCTGTATC
GCCATGGGAACGGATGACCTTGATGAGAATTGCCAACAAGGTTTGTCGGT
GCCATCCTTCTCCTACACAATTGACCACACCCAGACAAGTCTGCCGGTTC
TGTATGGAGGAGTGGACACACCTGTTGTCTTCAACACAACCGTGCGCAAC
GATGGGGGACCGCCCATACCTGCCGGCAGCCAGCCTAACTTCCACCTGCA
ACTGTACCTGGCTGAACAACCGGCTCTTCCCAGCTCACCATTTGCAGACT
CCACACAGATCAACATCACCTATGGCAACCAGGCGACCGTCCTGACCAAT
AAGATTGCTCCGGATGGAGGTCATTTGACCTTCACGTCACTCCAGGCTGT
CGTCACGATCATCGACTTCCTTGACGATAACCCATCCGATGACATTGCCT
GTATCGCCATGGGAACGGATGACCTTGATGAGAATTGCCAACAAGGTTTG
TCGGTGCCATCCTTCTCCTACACAATTGACCACACCCAGACAAGTCTGCC
GGTTCTGTATGGAGGAGTGGACACACCTGTTGTCTTCAACACAACCGTGC
GCAACGATGGGGGACCGCCCATACCTGCCGGCAGCCAGCCTAACTTCCAC
CTGCAACTGTACCTGGCTGAACAACCGGCTCTTCCCAGCTCACCATTTGC
AGACTCCACACAGATCAACATCACCTATGGCAACCAGGCGACCGTCCTGA
CCAATAAGATTGCTCCGGATGGAGGTCATTTGACCTTCACGTCACTCCAG
GCTGTCGTCACGATC
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000007 | genome | Sc0000007:180499..181922 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL96869_cuf3 |
| Biotype | protein_coding |
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