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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL96855_cuf0 >transcript:BL96855_cuf0-protein ID=transcript:BL96855_cuf0-protein|Name=transcript:BL96855_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=128bp
MAAENSRRSGVSEWRCVGTVEQLRKQKCRRLYAAAGRSQDVALFYVGEKF
HALEASCAHAEGPLDQGDIEELNGCYTVVCPLHFYEFDISTGKSESGLRQ
QTYEVKQEDGNVYVKFDCELHLRRPERK Run BLAST on NCBI mRNA from alignment at Sc0000007:3115769..3122993- Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL96855_cuf0 ID=transcript:BL96855_cuf0|Name=transcript:BL96855_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=7225bp|location=Sequence derived from alignment at Sc0000007:3115769..3122993- (Branchiostoma lanceolatum)
GTTGTGGCCGAAGATGCAAATTTGCCATAATTTGCCTATCCCATCGTATT
AACACCCCCTTTGCTCGTAATGTGATAGTCTGGTGGTCACGTGACTACAG
GTGATCCAACATGGCTGCGGAAAACAGCAGACGATCCGGCGTCTCGGAAT
GGCGGTGTGTCGGAACGGTGGAGCAGCTACGGAAACAGAAATGCCGGCGA
CTGTACGCCGCAGCCGGGCGATCCCAGGACGTGGCGTTGTTCTACGTCGG
AGAGAAGTTTCACGCGCTGGAAGCGTCGTGCGCGCATGCAGGTGAGGCAT
CGGATACGTTCACCTGCCACAAACTCACGCACATGTGTGCTCTGAAAAGC
CGACATATATGTAACGATATAGATCAGAGTGATCATATAACGTTAGCCTT
CACGTTAAACTCACAAAACTAGTTTTATATCATACTAGTAGTCTAAGTCA
AAATTCTCCTTTAATTTTATCATTATTATATGATTTTATTAGTAATATTG
AGTTATAACTTATAATTACTTGGTACTTGCCGTCTTTATGTGATTGCACC
ACTGAAAGTCATGTTTTTTTCTTTCTTTCACATGGAGTTGCGATATTCCT
GTGACATATGATATATGTTTAGATCAACCGCGGATTCCCTGATTGCAATT
TATATATACGATTAGTATCAGACCGAATTCCCTGCTAGAATACATTCTGT
ATACTTGAATTCGGGATAAAATGCCCTATTTTTTTGCTTCATCAATATAG
AACATTGATAGACGTGATGCACTAAAGAAGGCTTTCTCCAAAGCCATTAT
ATACATCATGAGATCTTCTTTTCAACCTTCACAAGAGCCATGCAATTAGA
GCGCTCGGCGCTGTTCCCGTGTGATCCCCCTAAGACAAAGTACTCTCCGC
TGAATAAATGTGCAAGTCAAGAATATCTTATTTGACATCAAGGTGCCCCG
GCGACGCTTAACACACACCCGAAGCGTGAAAATTGCTCAAATCTGGCGGA
AATGCACATACTGAGACATTACTAATTACGTCGTATGCGCAGCGGCTAGC
CTGGAAACCATACCGTCGGGAACTCTCTGGTTTCTCTGCGGGACTGGGAG
TGATGCCCGCCCGCCCAGACAGATTTAGCCAGCCCGAGGGGTAGTTAGCT
CTACGGTGGCGGCAAAACTACAGTGGCTGCTAAACTATGGTAGCTGCGAA
ACTCTATATGGCAGCAAAGACAGACTGACAGAAACGGGTCAATTTAGCAG
ACTGGGCCCGTTAAAACACACCCAAGCCGACCCGTAGAGACTGGGACCAG
GCTAGCAGCGGCCAGCGCAGTAGCACAAAGATGGATTCGCGTTTCAAATA
TAGGCGAACCAGAAACCATTTTCGGTAGAAGAGGAAGTACCACTGAACGT
TTGGTTTGCCAGTCAATAGATTATGCAGGTTTTTGTCGTCAATCCATTTT
CTGCTGTCAACCTTTTTTGCGCTATCCTTTCTGTGCATTTGTTGCTTAAT
TTTCTAAGCCTCACCTACCCTTCTGTGCCTCATAATGTTGCTAAGTAGTG
TAAGTATGGCGCGCAGAAGGACTTACAAACACTGACGTCAACCTCCGTGC
CTACTAACCACAGATATGGAAAATCCATGTGTGACCTCAGTCGTACTTAT
GATGTTTCTAATTGCTGATACTGACTAAACTGATTTTTAATTTTGAATGA
CAATAAGAGGAGAGTTAACAACAGGCAAGCTAGAAATTGTCGGATGAGAA
ATACGGATCTCAAATAACGTGTAATAGAAAAATAATTCTTTGCACAAGCA
AATTGAAATGGAAATTGAATGCACCTAATGAATATGATTTTCGCCTTCTC
TGGGTCTTTGAAATCTAACTGCCTGCTGTACGAATTAGTTACGTAGCCAC
AGGCAAAGGCTATTTCCATAATGGTCCTGCTGTGTGCGTGCGGCAACATG
TGTACATCTGTAAATTGCTGGGGGTTTTATTCATGAAAATCACGGAAGGG
TATTAAGATGTTAGGAAGCACGCATGCCATCAAAGATTGATCAAGGGTCA
CAAGGGAAAAATATGCTCTTGAGAAAATGAATTGTGTGGCCAAAAATATG
GAGTCAAGGAAGTCGGATCGGAAGGCAGGATTTTATCGCTTTAATTTTGA
ATTCTCTAGGCCATGATCAGACGAAGAGTTCCGAGAATTCATTTTGAAGC
GACATGAAATTTATCAGATAGGCCGGGTTCCTGGACGTCCAAGATATCGC
CATCATTAAATCAACATTGGATTTCAAAGGTGACGCTATGTGCATATAAT
ATAGCTTCCTAGAATAGATGAATGAGGCTATTTGCAAATCAAAGTATAAA
AGGTCAAACTTCCTGGAATTAATAGATGACGCTATATGCAAATAAACACG
ACGCGTCATGGAAATGATAGACGGCGCAACATATGCAAATCAACATAAAG
CACCCTGGAATTACTAGATGATGCAAATCAGCATAAAACACGACACGACT
TTATCAGTCTGTGCTCATAGTAATCATCTTAGATAACGCCTGCACGATAT
ATAGGGACTGACCGTTTTGTCCTACGGGTATAATGTAACGGAAGGGACTG
TTCACTTGATCACTAGTACTATTGTGGGTTTATCGTGGTATGGCCAGAAG
ATGTTGAAAAATGCATAAGCATCCATGCATATGTTACGATCTTTGGTACA
ATTTTGAATCAGTCCCTCTGTTTTCCTAACAGCTGGTGCTTCAAGTTGTG
GTTCTTTTCAGAAGGACCATTGGACCAGGGAGACATTGAAGAGTTGAACG
GCTGTTACACGGTGGTCTGTCCACTACATTTTTACGAGTTCGATATCTCC
ACGGGGAAGTCAGAGTCTGGTCTACGGGTAAGGATTGCTTGTCGGCTGTT
TGTATCTTCAGTAGCGTCTTTAACTGTTGGGGCATCCAAGGTTCAAATTT
CCCCATTGTTTACCATCGCAAAGAAGGTTATGTTTCGGATCTGTTTATGT
GTCTGTGAATAGTATAAATCTACTCGATAAGATGTGGATGGATCTTTATG
ATATTTGATAAGTTGGTTGGTGAAGAAAATTCTCTCTGGTGGCTTTCTTT
GGTGCAGGTACAATCACAAGACCAACGAGGTACCAATTTCACGCTAACGC
TGTTTATTTCCTTCAAGTCGTATACATCAGCAAAAAGGTACATAAGCATA
ACATGTTTCACTTAACAGGGCTTTCCAATCTAAACACAGTGCATCAATGC
AAAGAATATGAACATAACACAGTTAACTTAACTTAACGGAGTTTTCAGTA
TCGGGACAAATTCTCAGTCACAAATTACACCCTACAACCGCAATTTCAGC
CTGACTCAGCCGATTGACAGAGAAAGGGGAAATACTAGTACAATAGAACT
CACCAAAATGTTGATTGGGACTTGGGAGCGCAAGTTACCGAAACTATTGA
CAGAACTTCAAAACTATTGATGCCACCCACGTGGATGCTAGCCCGTTCCA
CCTGGCCTCAAGGGTCCTCAAGGTCCGATCTCTCGCTCGCTCTCCTTAGT
CTCCTACAAACCACGAGGTAGAGATAAATGTAATAGGCATTCCAGTCAGA
CTGCCTGGTAGGTTTTCGACTCAGCTACTGATTATTCACACACGAAGAGC
CGTGCAACACCGCGACGAACCTCCTTCAGACGAAACCCGTAGATAACCGG
GTTGATTGCAGAGTTCAATATGATGAAGACCATCCTTCTGTACACGGAAA
CCATGTCCGTTGAAAGCTCAGCCAGTTTGACGAAGAACGGCATCCATCCC
ACTAGGAACACGATGGTGATGATCACGATTGTGATGGCGGATCTTCTGTT
GACGCTCGGCTGGGCACCCACGGCGGCTTCTTGTGCTGCGATGGCGCTCA
CGTGCTTCCACAGGCACCAGAATATACCCAGATTGAAGAGGAGGATTGCC
GCCATCGGGATGAAAACGAACACGACGGCAACGATCACGTATTTCTTAAA
CAACCCTGCACCTAACGGGACACACGTCTCGTCGAAACGCCCTGTGCATC
GCTGGTCGAAGAGTGGCAGCATAGCCAGGAGCAGTGACCACACCCACACG
ACAACGATCACGACCTTGCACTTCTCGTTGGTGACGTTGTTGACGTAGCT
CATCCCGTGCACGATGAACCAGTAGCGCTCCGCCGTTAGCGCCATGAGAC
CGTAGGCGGAGGACATTCCAGAGAGTAGGATTAAGAAGAAGCGGAAACTT
AACATGAAATCAGAGGGGACGGTCTCCGTTGCTACAACGTACAAATTCGA
GATACCGCCGATCATGAAGCTTATGCCGGCCAAAACGTCGCTTGCGGCCA
GATTAGCCATGAGGATGTAGGCGGGCGTGTGGAGATGTTCATACTTGACG
ATGGCTGCTAGTGGGAGGCTGTTTGACACAACCGACCAGACGCCCAGAAA
TATAGTGATGCCTATGATGACCAGAGACTCGGTAGAGACGAACTGTTGAA
GAGGGAAGGAAGATGGTGCCTCCTCTTGCAGACATTCCTGAGAGTTTGAA
GTGATATTTTCTCCTAAATCAGAGCTGTTGTTTATAACCGCAAAAGTACA
GTTTTCAGACGAACCATTCGGGATCCGCAATGTTGAATTGTTGGGCTTGT
CACCAGCCTGGTTTGTAACGTTCAAGTCGGATCCAGAATTCGGATTTATT
CCAACACAGCGACTTGTTACGTGAAGGACCACCACCAACGCCACTCTGAT
ATAGCTACCTTTGTACATCATCATTCCTCCCTGAGTTTCTGTCTTTCTGA
GACAAAACACGGTTGGCACCTTATAAATGGCATTTTCATTAATTTCTAGG
ACACCTATAAATGGCATTTTCATTAATTTCTAGCTATAGGACACCTACGC
TTTTCCTTTTTTAAAAGACTTGCAATCGGATGTCCTGCAGAGACCAGCTG
ATTCCAGTGGGTGTTCCTTTTTCCCCCGTTCTTCTAATTAAGTACATGGG
AAAATGAGGTATAGGTGCCACCTGGGTGCATTACTCTTTTAAGCTCCGGA
AGGAGAATCAGCTCCGACAAAAAGATTGTGTGTCCTTTAAAAACCCTCTT
CACAAGTTGGTATAGATAATATGAGCCTTTCACACGTTGGATAACATGTG
TTTTTTGGTAAAGAAGATCATTAAGTGATATGATGTATGCAAATGAGAAC
CTTCTTTGCATAACCTAGTAGAAATGGTTCGAATACGTCAGTTGTAAAGG
ATAACATCATTTGTCGAAGGTAACAGATTGGGGAATACTAGTGTCCTAAT
GTCTTTTTTTCGAGAAACCCTAACTTTGCTCCATGTGCAAAATATGTTAA
CATATACCAGCATGGATGGACATGTATTAGCTCCATCATTGTTTAACCAT
TGTTAACCTTGGACAACGTTTAGTTTCTCCTTTGTTCAAAGATGCATGCT
GTTGTTTTTCAGCAACAAACATACGAAGTAAAGCAAGAGGACGGCAACGT
CTACGTCAAGTTTGACTGTGAACTTCACCTACGGCGGCCAGAGAGAAAAT
AAAATCAGGAATCAGACTGCAAGCAACTTCTCTGCTTTATCATAAGTTTA
TGTATTGAAATATTGTAAGATTCAAAGAAGTGTGATATTTTGTGCTTCAT
CTTTTTGAGTGAATTTATAGGAAACTACCGTATCTGTTGTGTGCAAATTG
TATATTAAGTGTAGTTTCAAAGTCTAGTTACTTTTGCTTGGCTTGTATTA
TAGATAACTTATCACTGCACGTAAGCTGTTTCAATTACTACTGGTGCCAT
GTAGATGTTGACATGGATGTCATTGATAAGTTTTGATGGTCACTTGTAAT
AGCCTGGCTCAAAATCCTATAACAAAAAATCTTGAAATGAATGTTACCAT
AATCACCTTTAATAACTACATGTAAATCATTCTCATTCATACTACAATTA
TTCTAAATAATTAGACATGACCTTTGGTATACCATATTACAAGTATTTAT
TTTTGTAATAGGTAGTAGTAACGAAATTGCTCAGAAGAAAAACGTATAAA
AAGCTATACTAGAAAGTTCTGTGCAAAGTAAATTGTGAATGTAGACTATA
CAGGATCTTACTCTAGTTAGCTATGTCTGTTCATCACAGAGGAAACTGAC
TAAATTTTCAGTTAGTGCTCTTAGTTTAGTTTCTACCACACAAATGTACA
TAAACAGTAAGATTACTAAAAAGTATGGTGTCTAAACATACTACATGTAC
CTAAATGTGTATGGCTAGTCAAATAACTTGCATAGCATAATGAAATACAG
TCAAACCTGTACAACTAGTGACCATCTCGGAATAAAAGCAACCTAGCTAT
TGTGGCCATATTTTGGTGGCCCCCTATTCGATAATTTTTACCACTGATTC
AAGCATTAAGAATCCTAACTATAGTGACCACCTGTATACTGTGACCATTG
TCTTCAAGTCCCTTGAGTGGTCATCACTTTACTACAGGTTTGGCTGTATT
TACTGTTGAGAATATGTCAGATTTAGCATGTAATTTATGGGTCCAAATCA
CACAAAAAAGCTGCATATTTCAGGATTATATAACGCATTACGAAAAGAGA
AAAACACAAATAAAAACATCTCATTAGTAAAAAAACATCAAAATATATAA
GTAATTACATGATGTGTAACCTTCATACTACTGCCTGATGTGATAACCAA
TAGAGATTACCAATGAAAAGGCTACTCGTACATGTACATTTGTATTTTAG
CAGTGAGAAGGTTAAATAGCAGTGTTTCTAGCCTACCATATACCTCACAT
TAATATCAAAATCTACAAGCTGCTAAATATAGGACTGTTCTACTTAGAAG
TCTCACAAAGGGGTGGTCTGGTATATTCTATCACCTTTGCAATCTTTCTA
TGTATGAGTTGTTGATTTCTAAATATTTTCTTACGCCCTGTGAAACATTT
GGATGGAACAGCCCTAAATGGAACGATAGTTTACATCTCTTCAGACATGT
GTACATCTCAAATTATTAATCGTACACTTATCAATGTAAATCTTGACAGG
GTTTGAGAGGTGTAGATCTATAATGGTGACCTAAAAGACCACCATCATAT
TAAACTTCAGCAATTCTTTTTCATTCCTTAAAGTATGGTTTTACAGGAAT
ATGGTAAATCAAGCTTTAGACGTCTCCAAAAAGTTGAGACAGAAAAACAG
ATGTTTTCTTATTGAAGAGGTAGAG Coding sequence (CDS) from alignment at Sc0000007:3115769..3122993- >transcript:BL96855_cuf0 ID=transcript:BL96855_cuf0|Name=transcript:BL96855_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=1161bp|location=Sequence derived from alignment at Sc0000007:3115769..3122993- (Branchiostoma lanceolatum)
ATGGCTGCGGAAAACAGCAGACGATCCGGCGTCTCGGAATGGCGGTGTGT
CGGAACGGTGGAGCAGCTACGGAAACAGAAATGCCGGCGACTGTACGCCG
CAGCCGGGCGATCCCAGGACGTGGCGTTGTTCTACGTCGGAGAGAAGTTT
CACGCGCTGGAAGCGTCGTGCGCGCATGCAGAAGGACCATTGGACCAGGG
AGACATTGAAGAGTTGAACGGCTGTTACACGGTGGTCTGTCCACTACATT
TTTACGAGTTCGATATCTCCACGGGGAAGTCAGAGTCTGGTCTACGGCAA
CAAACATACGAAGTAAAGCAAGAGGACGGCAACGTCTACGTCAAGTTTGA
CTGTGAACTTCACCTACGGCGGCCAGAGAGAAAATAAATGGCTGCGGAAA
ACAGCAGACGATCCGGCGTCTCGGAATGGCGGTGTGTCGGAACGGTGGAG
CAGCTACGGAAACAGAAATGCCGGCGACTGTACGCCGCAGCCGGGCGATC
CCAGGACGTGGCGTTGTTCTACGTCGGAGAGAAGTTTCACGCGCTGGAAG
CGTCGTGCGCGCATGCAGAAGGACCATTGGACCAGGGAGACATTGAAGAG
TTGAACGGCTGTTACACGGTGGTCTGTCCACTACATTTTTACGAGTTCGA
TATCTCCACGGGGAAGTCAGAGTCTGGTCTACGGCAACAAACATACGAAG
TAAAGCAAGAGGACGGCAACGTCTACGTCAAGTTTGACTGTGAACTTCAC
CTACGGCGGCCAGAGAGAAAATAAATGGCTGCGGAAAACAGCAGACGATC
CGGCGTCTCGGAATGGCGGTGTGTCGGAACGGTGGAGCAGCTACGGAAAC
AGAAATGCCGGCGACTGTACGCCGCAGCCGGGCGATCCCAGGACGTGGCG
TTGTTCTACGTCGGAGAGAAGTTTCACGCGCTGGAAGCGTCGTGCGCGCA
TGCAGAAGGACCATTGGACCAGGGAGACATTGAAGAGTTGAACGGCTGTT
ACACGGTGGTCTGTCCACTACATTTTTACGAGTTCGATATCTCCACGGGG
AAGTCAGAGTCTGGTCTACGGCAACAAACATACGAAGTAAAGCAAGAGGA
CGGCAACGTCTACGTCAAGTTTGACTGTGAACTTCACCTACGGCGGCCAG
AGAGAAAATAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
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| Sc0000007 | genome | Sc0000007:3115769..3122993 - |
Properties
| Property Name | Value |
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| Transcript id | BL96855_cuf0 |
| Biotype | protein_coding |
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