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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL96843_cuf22 >transcript:BL96843_cuf22-protein ID=transcript:BL96843_cuf22-protein|Name=transcript:BL96843_cuf22|organism=Branchiostoma lanceolatum|type=polypeptide|length=280bp
SSCVPTCGECPPCPKGYVRVDRNRCLKPTDCPCITADGVIVPAGTTKKIG
ECRVCECYNNVLTCRDMCTKPEITTTAATPETTSAGTTTVQTTTYKTPRK
VTTPGTTSETFTTTSETYTTRPETYTTRPETYTTRPETYTTRPETYTTRP
ETYTTRPETYTTRPETYTTRPETYTTGPETYTTGPETYTTKPETYTTKPE
TYTTKPETYTTRPETYTTTPGTYTEPEKTYPGTTKPTRKVTTEGTTVTST
KPEGTEPERTFPELTTRPTYTSVTTECVKK Run BLAST on NCBI mRNA from alignment at Sc0000146:579838..582928- Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL96843_cuf22 ID=transcript:BL96843_cuf22|Name=transcript:BL96843_cuf22|organism=Branchiostoma lanceolatum|type=mRNA|length=3091bp|location=Sequence derived from alignment at Sc0000146:579838..582928- (Branchiostoma lanceolatum)
GTCGTCCTGTGTTCCTACCTGTGGGGAGTGTCCACCTTGTCCCAAGGGCT
ATGTTCGTGTGGACAGGAACCGCTGTTTGAAGCCCACAGACTGTCCTTGT
ATCACAGCGGATGGTGTTATTGTTCCGGTAGGGAGGAACTCTTGTTCACT
CAGCAGTACTATGTCATATTGACTGTCACAAGTGCTCAATTTCTGGCACA
CAGTTTCATGGCTACCTTGTTAGTTTATCACTGCCTCATTATTGAATTTA
GTATTAGGTAATGGTTAGTTGCATATACTGATTGCAGAAATGACTAGAAA
TGGTTTTTTATTTTCCATTAAAAAGTCACCCCAGTTTAAAGAGTAAAAAA
AATTCTATGATCACCCCACAGGCTGGAACAACAAAGAAGATTGGTGAGTG
CAGAGTATGCGAGTGCTACAACAATGTCCTTACTTGCCGCGACATGTGCA
CAAAGCCCGAGATCACCACAACTGCGGCAACACCAGAGACCACTTCTGCT
GGTACAACAACAGTACAGACTACTACATACAAGACACCAAGGAAGGTCAC
AACTCCAGGAACCACATCTGAGACCTTCACCACCACATCTGAGACCTACA
CCACCAGGCCTGAGACCTACACCACTAGGCCTGAGACATACACCACCAGG
CCTGAGACCTACACCACTAGGCCTGAGACATACACCACCAGGCCTGAGAC
CTACACCACTAGGCCTGAGACATACACCACCAGGCCTGAGACCTACACCA
CTAGGCCTGAGACCTACACTACTGGTCCTGAGACATATACTACTGGTCCT
GAGACATACACCACCAAGCCTGAGACATACACCACCAAGCCTGAGACATA
CACCACCAAGCCTGAGACATACACCACCAGGCCTGAGACATACACTACCA
CACCAGGGACATACACTGAGCCAGAGAAGACATACCCTGGGACCACAAAG
CCAACAAGAAAGGTTACAACTGAGGGTACAACTGTGACTTCAACTAAGCC
AGAGGGAACTGAACCAGAGAGAACCTTCCCTGAGCTTACTACAAGACCAA
CTTATACTTCTGTTACAAGTATGTGAGATTTTGAATTGAATTCTAATGAT
AATTATTTACAACATACCACAGTTATGATTGTATGTTTGTAGTATTTTAA
ATGATTGCTTAAGGAAGGTTGATACCTCTTTGCTCTCCATATATGACAAG
CAACAACCTTCATTATATCACAAACTTACAGAATGGGTTTCTATTTTTAA
TATGATAGCACAATGTACAAAAACAAGGCAAATGTTACATACTTTGTGTT
CATTACGATCTTTCACTGTTACTGTTTCTGTGCTATGAATAGCTTTTCAC
AGGACCTATCCAGTAATCAATGACTAGAAATAACCAATGAACATAATGTT
GATTATCTAGATCCGTTCGGACAAATGGTATTGTATGATTATTTTTCAGC
TGAGTGTGTAAAGAAGGTGTACGGCTGCTCCTTCAAGTGTGACGAGACCT
GCCACTGCTACAGGTACAAGATCACACAGTGTGCATACGGTGATCCTAGT
GCCTGTGTTCCAACATGTGGAGAATGTCCACGTTGTCCACCAGGTTATAT
CAGGAAGGACCTGTACACATGCATCAAGCCCACACAGTGCGACTGTATCA
CAGCTGGAGGTGTGGTTGTTCCTGTAAGTACCAATGGCTTTTTGGTCTTG
GTGTTTTGACTTTCAAGGTTCTTTAACCTAGTCCCATTTACTTTAGACAC
ACTAGCATGATAGACAAAAGGCAAATTGATTGAGAAACTTTCCTGCTTTT
TGTTTTCCAGGCTGGCACAGTAAAGAAGGTTGACGAATGCAATGAGTGCA
CATGCTACAACAACAAGTTGGTATGCACAAACCATTGCACAACTTCAGAA
ACTACCACCACCACTGGTATAACCACAAAGAAAACTGTTGGCACAACAAC
TGTAACAACAACAACCCCTGAAAAGACCATCCTGGAAACTACTAAGCCTG
AGCGCAAGGTTACAACTCCAGGCACCACACCTACAACTACTCCAGAAAAC
TGGACAACAGTGTTTAGCACTGCAACAACAACACCAGAGAAGACTTACCC
AGAGACAACCAAGCCTGAGGTTACTGAGCCAGAGAAGACCTACCCAGAGA
CCACCAGGCCAGAGGTTACTGAACCAGAGAAGACCTACCCTGAGACCACC
AAGCCTGAGGTTACTGAGCCAGAGATGACCACTAGACCAGAGGGCACAAC
CTCAGAGCAAACCTATCCAGAGACAACGACATATCGCACACCTCGTAAGG
TTACAACACCAGGCAAGAAAAATTCTTCCTGTTAAACTAGTCTGTCTTTG
TTTGCCTGGTTTCTATATGAATTGAGTTTGTCAAGATGATGTTGAAATGC
TAACAGTAGTCTTGATAATTATTACATACTTATTCGTTGTAATTGCTAAG
ACTTGAAAAATTGTTGCAATACAGGAACAACAACAACAACCCAGGTGACT
ACCACCAAACCTGAGGTTACTGAGCCAGAGAGGACCTACCCTGAGACCAC
CAGGCCAGAGGTTACTGAGCCAGAGATGACCTACCCTGAGACCACCAGGC
CAGAGGTTACTGAGCCAGAGAAGACCTACCCTGAGACCACCAGGCCAGAG
GTTACTGAGCCAGAGAGGACCTACCCTGAGACCACCAGGCCAGAGGTTAC
TGAGCCAGAGATGACCACCAAGCCTCAATGGACTACAACACCAACATACA
CATCTGTCACAAGTTAGTATTCTATAATAATTGACATAGAATAAAGTTAT
GGGTATGTCTGTAATGGGTTGACTATCATGCATTCTGATATAAAACTTGA
TTACGGGTACTAATCAATTTGCCAGCATCTTAAGATCTATTTCCTTTGGT
GATTGGTAGTAAAAGACAGGATTGTGTGTACATTTTTAACAAGATTACCT
GCTGCAATTGTTATGTTTATAGATTTTAGTAAATAAAAGCTGATCATTTC
CCAAAATAATTTCAAGTCATGGTTGTGTTTTAATCTTAAGACAGAAGATA
AAAGTATCACTTTTGCTTTTCAGCTGAGTGTGTAAAGAAGG Coding sequence (CDS) from alignment at Sc0000146:579838..582928- >transcript:BL96843_cuf22 ID=transcript:BL96843_cuf22|Name=transcript:BL96843_cuf22|organism=Branchiostoma lanceolatum|type=CDS|length=2520bp|location=Sequence derived from alignment at Sc0000146:579838..582928- (Branchiostoma lanceolatum)
TCGTCCTGTGTTCCTACCTGTGGGGAGTGTCCACCTTGTCCCAAGGGCTA
TGTTCGTGTGGACAGGAACCGCTGTTTGAAGCCCACAGACTGTCCTTGTA
TCACAGCGGATGGTGTTATTGTTCCGGCTGGAACAACAAAGAAGATTGGT
GAGTGCAGAGTATGCGAGTGCTACAACAATGTCCTTACTTGCCGCGACAT
GTGCACAAAGCCCGAGATCACCACAACTGCGGCAACACCAGAGACCACTT
CTGCTGGTACAACAACAGTACAGACTACTACATACAAGACACCAAGGAAG
GTCACAACTCCAGGAACCACATCTGAGACCTTCACCACCACATCTGAGAC
CTACACCACCAGGCCTGAGACCTACACCACTAGGCCTGAGACATACACCA
CCAGGCCTGAGACCTACACCACTAGGCCTGAGACATACACCACCAGGCCT
GAGACCTACACCACTAGGCCTGAGACATACACCACCAGGCCTGAGACCTA
CACCACTAGGCCTGAGACCTACACTACTGGTCCTGAGACATATACTACTG
GTCCTGAGACATACACCACCAAGCCTGAGACATACACCACCAAGCCTGAG
ACATACACCACCAAGCCTGAGACATACACCACCAGGCCTGAGACATACAC
TACCACACCAGGGACATACACTGAGCCAGAGAAGACATACCCTGGGACCA
CAAAGCCAACAAGAAAGGTTACAACTGAGGGTACAACTGTGACTTCAACT
AAGCCAGAGGGAACTGAACCAGAGAGAACCTTCCCTGAGCTTACTACAAG
ACCAACTTATACTTCTGTTACAACTGAGTGTGTAAAGAAGTCGTCCTGTG
TTCCTACCTGTGGGGAGTGTCCACCTTGTCCCAAGGGCTATGTTCGTGTG
GACAGGAACCGCTGTTTGAAGCCCACAGACTGTCCTTGTATCACAGCGGA
TGGTGTTATTGTTCCGGCTGGAACAACAAAGAAGATTGGTGAGTGCAGAG
TATGCGAGTGCTACAACAATGTCCTTACTTGCCGCGACATGTGCACAAAG
CCCGAGATCACCACAACTGCGGCAACACCAGAGACCACTTCTGCTGGTAC
AACAACAGTACAGACTACTACATACAAGACACCAAGGAAGGTCACAACTC
CAGGAACCACATCTGAGACCTTCACCACCACATCTGAGACCTACACCACC
AGGCCTGAGACCTACACCACTAGGCCTGAGACATACACCACCAGGCCTGA
GACCTACACCACTAGGCCTGAGACATACACCACCAGGCCTGAGACCTACA
CCACTAGGCCTGAGACATACACCACCAGGCCTGAGACCTACACCACTAGG
CCTGAGACCTACACTACTGGTCCTGAGACATATACTACTGGTCCTGAGAC
ATACACCACCAAGCCTGAGACATACACCACCAAGCCTGAGACATACACCA
CCAAGCCTGAGACATACACCACCAGGCCTGAGACATACACTACCACACCA
GGGACATACACTGAGCCAGAGAAGACATACCCTGGGACCACAAAGCCAAC
AAGAAAGGTTACAACTGAGGGTACAACTGTGACTTCAACTAAGCCAGAGG
GAACTGAACCAGAGAGAACCTTCCCTGAGCTTACTACAAGACCAACTTAT
ACTTCTGTTACAACTGAGTGTGTAAAGAAGTCGTCCTGTGTTCCTACCTG
TGGGGAGTGTCCACCTTGTCCCAAGGGCTATGTTCGTGTGGACAGGAACC
GCTGTTTGAAGCCCACAGACTGTCCTTGTATCACAGCGGATGGTGTTATT
GTTCCGGCTGGAACAACAAAGAAGATTGGTGAGTGCAGAGTATGCGAGTG
CTACAACAATGTCCTTACTTGCCGCGACATGTGCACAAAGCCCGAGATCA
CCACAACTGCGGCAACACCAGAGACCACTTCTGCTGGTACAACAACAGTA
CAGACTACTACATACAAGACACCAAGGAAGGTCACAACTCCAGGAACCAC
ATCTGAGACCTTCACCACCACATCTGAGACCTACACCACCAGGCCTGAGA
CCTACACCACTAGGCCTGAGACATACACCACCAGGCCTGAGACCTACACC
ACTAGGCCTGAGACATACACCACCAGGCCTGAGACCTACACCACTAGGCC
TGAGACATACACCACCAGGCCTGAGACCTACACCACTAGGCCTGAGACCT
ACACTACTGGTCCTGAGACATATACTACTGGTCCTGAGACATACACCACC
AAGCCTGAGACATACACCACCAAGCCTGAGACATACACCACCAAGCCTGA
GACATACACCACCAGGCCTGAGACATACACTACCACACCAGGGACATACA
CTGAGCCAGAGAAGACATACCCTGGGACCACAAAGCCAACAAGAAAGGTT
ACAACTGAGGGTACAACTGTGACTTCAACTAAGCCAGAGGGAACTGAACC
AGAGAGAACCTTCCCTGAGCTTACTACAAGACCAACTTATACTTCTGTTA
CAACTGAGTGTGTAAAGAAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
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| Sc0000146 | genome | Sc0000146:579838..582928 - |
Properties
| Property Name | Value |
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| Transcript id | BL96843_cuf22 |
| Biotype | protein_coding |
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