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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL96836_cuf10 >transcript:BL96836_cuf10-protein ID=transcript:BL96836_cuf10-protein|Name=transcript:BL96836_cuf10|organism=Branchiostoma lanceolatum|type=polypeptide|length=235bp
MYSTVVFCLLAMSGALAMPVTDQMNSTQSVTEIIQNATQAQDVTVEPMVV
NVTEQVGTLQPTSTTQSTPLVTDNVATNASTTTEEVVVETTTEPPKFIFT
CDGKTAGLYADTDNCYQYYECVDGFSTAFVRMCAPGGPVFDPAKQRCDWP
ENVPAPCGTKVQDDGNIRAGSSPLARSFSTFSCTGKQPGLYADPADCSMY
YECVLGHPVYHRPCAPGGTVYDPASLRCMWPHEVS Run BLAST on NCBI mRNA from alignment at Sc0000029:829315..831462- Legend: five_prime_UTRexonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL96836_cuf10 ID=transcript:BL96836_cuf10|Name=transcript:BL96836_cuf10|organism=Branchiostoma lanceolatum|type=mRNA|length=2148bp|location=Sequence derived from alignment at Sc0000029:829315..831462- (Branchiostoma lanceolatum)
CCGGGTCCCATGGTTTGACAGCCGCGCGCTCTACACTTGCGCCACACGAC
GCCACAAAAGAACAAAGAAATGTTAAGCACAAAGAAATGGAGTACTAACG
TCAAAATAGTGTCGTGTGCGTAACCGCAAGTGTGGATGTATGTTGGAAAC
CATAATTATGAATGTTTAATTGCAAGCTTCGCCTTTTCCGCCGGTTGGAC
TTAAATGCGGACAATTTGCGTCAAACGTTTTAAGATCACAGCATGCGTAA
GAAATGCAGTATGAACGTCAAAATAGTGTATTGTGCGTAATCATAGGTGT
GAACGGATGTTGGTAAAAATCAGCGCTGAGAACACATTAGCGTTTGCCAT
AAACACTTGTACAGACGTCATATTTGCATGGCAAACCAACGATACTTGGA
AATACTGCTACATAGCAAAATACATTTCCTTCTAGAGCGGAAGTGACGGC
GAATTCCTTTGTACTTTGTCCGAAAGGTCGCGCGTCACGACACCTTTCCA
TGTCGTCACTAGCTGACCCTACCTGGCTTGTACAAACACTCTACGCAGCA
AACACCTGATAACGCCACGAGGCCACACGTGAGTCGCACAGGAAATGGCA
GAGTATAAAAATGCGCTGGTTTGTAGCAGTAACCATTCACAACTTCACAT
CACAGAGAAGTCGTCCACTTTCACAGAGGAGAAACTACAGAGAGAGACAG
CAGCATGTATTCTACAGTCGTCTTCTGCCTTCTGGCCATGAGCGGTGCGC
TCGCCATGCCTGTTACGGACCAGGTGAGTTTTTCTCCCGTTTGTTGTTCC
TCACGGTACGGTACGGTCACATTCGTTGTAGGTCGTAATGCGATTTAGAT
GCCGTAGAACCTTCAAGAAGGCTGAAACTACAGTCGAAAAGGATGTAAAA
CAATACTTTTAGGGCAGCCGAATTTTGTACGGCAATGTGCACGACTATCA
CAAGACTATCAGTTTGAAATTGTACGACGATCTTGCGACGGATGTGACAG
ACATTAAATTTCATATTCTAATGATTTGAATTAACTACAATTTATAGCCG
TTTCTTGTAAAAAAATTGATTCCTAACTTCTTTTGTATTATGCTCTATTA
CTTCTCAGATGAACAGCACTCAATCGGTAACGGAAATTATCCAAAACGCC
ACCCAAGCGCAAGACGTCACCGTGGAGCCAATGGTAGTCAACGTTACAGA
ACAGGTCGGAACGCTGCAACCGACGTCAACGACACAGTCCACGCCATTGG
TCACTGACAACGTAGCGACAAATGCATCTACAACAACCGAAGAAGTTGTG
GTCGAAACAACAACCGAACCACCAAGTAAGAAGACATGCCTTTCAAAATC
ATTATCAACATGTTTACGTGCCTTGTTTCTATGTTCCTTCGGTTTGCAGA
TTTGCTGCTTTGCCGTCCAGTTTAGTTTACGCGGGGAAGGTGTGTAAGAA
AATATTAAGTGACTTATTAAACCCCCAAACATTGCTCTGTTCCGCCCCTA
CTAGAGCTTCGTACGACCAACTTAAGAACACTATATAACACCTTAAGTCT
ACAGAACATAAAACTGATGCCATTGACTGTTATTCTTTACAGAGTTTATA
TTTACCTGTGACGGAAAGACCGCTGGCTTGTACGCTGACACGGACAACTG
TTACCAGTACTACGAGTGTGTTGATGGCTTCAGTACCGCGTTCGTTCGCA
TGTGTGCGCCGGGAGGTCCCGTCTTCGACCCCGCCAAGCAGCGCTGCGAC
TGGCCGGAGAATGTCCCCGCGCCTTGTGGGGTAAGTCTACAGTTTTATCT
TCCATTCAATGTCTATTCCGATCACGCTATGATATCTAGAATTAGATTTT
ACCACGATTAATAGAAGATAGAATTAGACGTCAGCTTTTCTAACATTTTT
CTTGATTGTTATTACAGACCAAGGTTCAGGACGACGGAAATATCCGAGCT
GGGTCCAGTCCGTTGGCCAGGAGTTTCTCAACGTTCTCTTGTACGGGGAA
GCAGCCGGGCCTGTACGCCGACCCTGCCGACTGCTCCATGTACTACGAGT
GTGTGCTGGGCCACCCCGTGTACCACCGGCCCTGCGCCCCGGGGGGAACC
GTGTACGACCCCGCCAGTCTCAGGTGTATGTGGCCCCACGAAGTGTCC Coding sequence (CDS) from alignment at Sc0000029:829315..831462- >transcript:BL96836_cuf10 ID=transcript:BL96836_cuf10|Name=transcript:BL96836_cuf10|organism=Branchiostoma lanceolatum|type=CDS|length=2820bp|location=Sequence derived from alignment at Sc0000029:829315..831462- (Branchiostoma lanceolatum)
ATGTATTCTACAGTCGTCTTCTGCCTTCTGGCCATGAGCGGTGCGCTCGC
CATGCCTGTTACGGACCAGATGAACAGCACTCAATCGGTAACGGAAATTA
TCCAAAACGCCACCCAAGCGCAAGACGTCACCGTGGAGCCAATGGTAGTC
AACGTTACAGAACAGGTCGGAACGCTGCAACCGACGTCAACGACACAGTC
CACGCCATTGGTCACTGACAACGTAGCGACAAATGCATCTACAACAACCG
AAGAAGTTGTGGTCGAAACAACAACCGAACCACCAAAGTTTATATTTACC
TGTGACGGAAAGACCGCTGGCTTGTACGCTGACACGGACAACTGTTACCA
GTACTACGAGTGTGTTGATGGCTTCAGTACCGCGTTCGTTCGCATGTGTG
CGCCGGGAGGTCCCGTCTTCGACCCCGCCAAGCAGCGCTGCGACTGGCCG
GAGAATGTCCCCGCGCCTTGTGGGACCAAGGTTCAGGACGACGGAAATAT
CCGAGCTGGGTCCAGTCCGTTGGCCAGGAGTTTCTCAACGTTCTCTTGTA
CGGGGAAGCAGCCGGGCCTGTACGCCGACCCTGCCGACTGCTCCATGTAC
TACGAGTGTGTGCTGGGCCACCCCGTGTACCACCGGCCCTGCGCCCCGGG
GGGAACCGTGTACGACCCCGCCAGTCTCAGGTGTATGTGGCCCCACGAAG
TGTCCATGTATTCTACAGTCGTCTTCTGCCTTCTGGCCATGAGCGGTGCG
CTCGCCATGCCTGTTACGGACCAGATGAACAGCACTCAATCGGTAACGGA
AATTATCCAAAACGCCACCCAAGCGCAAGACGTCACCGTGGAGCCAATGG
TAGTCAACGTTACAGAACAGGTCGGAACGCTGCAACCGACGTCAACGACA
CAGTCCACGCCATTGGTCACTGACAACGTAGCGACAAATGCATCTACAAC
AACCGAAGAAGTTGTGGTCGAAACAACAACCGAACCACCAAAGTTTATAT
TTACCTGTGACGGAAAGACCGCTGGCTTGTACGCTGACACGGACAACTGT
TACCAGTACTACGAGTGTGTTGATGGCTTCAGTACCGCGTTCGTTCGCAT
GTGTGCGCCGGGAGGTCCCGTCTTCGACCCCGCCAAGCAGCGCTGCGACT
GGCCGGAGAATGTCCCCGCGCCTTGTGGGACCAAGGTTCAGGACGACGGA
AATATCCGAGCTGGGTCCAGTCCGTTGGCCAGGAGTTTCTCAACGTTCTC
TTGTACGGGGAAGCAGCCGGGCCTGTACGCCGACCCTGCCGACTGCTCCA
TGTACTACGAGTGTGTGCTGGGCCACCCCGTGTACCACCGGCCCTGCGCC
CCGGGGGGAACCGTGTACGACCCCGCCAGTCTCAGGTGTATGTGGCCCCA
CGAAGTGTCCATGTATTCTACAGTCGTCTTCTGCCTTCTGGCCATGAGCG
GTGCGCTCGCCATGCCTGTTACGGACCAGATGAACAGCACTCAATCGGTA
ACGGAAATTATCCAAAACGCCACCCAAGCGCAAGACGTCACCGTGGAGCC
AATGGTAGTCAACGTTACAGAACAGGTCGGAACGCTGCAACCGACGTCAA
CGACACAGTCCACGCCATTGGTCACTGACAACGTAGCGACAAATGCATCT
ACAACAACCGAAGAAGTTGTGGTCGAAACAACAACCGAACCACCAAAGTT
TATATTTACCTGTGACGGAAAGACCGCTGGCTTGTACGCTGACACGGACA
ACTGTTACCAGTACTACGAGTGTGTTGATGGCTTCAGTACCGCGTTCGTT
CGCATGTGTGCGCCGGGAGGTCCCGTCTTCGACCCCGCCAAGCAGCGCTG
CGACTGGCCGGAGAATGTCCCCGCGCCTTGTGGGACCAAGGTTCAGGACG
ACGGAAATATCCGAGCTGGGTCCAGTCCGTTGGCCAGGAGTTTCTCAACG
TTCTCTTGTACGGGGAAGCAGCCGGGCCTGTACGCCGACCCTGCCGACTG
CTCCATGTACTACGAGTGTGTGCTGGGCCACCCCGTGTACCACCGGCCCT
GCGCCCCGGGGGGAACCGTGTACGACCCCGCCAGTCTCAGGTGTATGTGG
CCCCACGAAGTGTCCATGTATTCTACAGTCGTCTTCTGCCTTCTGGCCAT
GAGCGGTGCGCTCGCCATGCCTGTTACGGACCAGATGAACAGCACTCAAT
CGGTAACGGAAATTATCCAAAACGCCACCCAAGCGCAAGACGTCACCGTG
GAGCCAATGGTAGTCAACGTTACAGAACAGGTCGGAACGCTGCAACCGAC
GTCAACGACACAGTCCACGCCATTGGTCACTGACAACGTAGCGACAAATG
CATCTACAACAACCGAAGAAGTTGTGGTCGAAACAACAACCGAACCACCA
AAGTTTATATTTACCTGTGACGGAAAGACCGCTGGCTTGTACGCTGACAC
GGACAACTGTTACCAGTACTACGAGTGTGTTGATGGCTTCAGTACCGCGT
TCGTTCGCATGTGTGCGCCGGGAGGTCCCGTCTTCGACCCCGCCAAGCAG
CGCTGCGACTGGCCGGAGAATGTCCCCGCGCCTTGTGGGACCAAGGTTCA
GGACGACGGAAATATCCGAGCTGGGTCCAGTCCGTTGGCCAGGAGTTTCT
CAACGTTCTCTTGTACGGGGAAGCAGCCGGGCCTGTACGCCGACCCTGCC
GACTGCTCCATGTACTACGAGTGTGTGCTGGGCCACCCCGTGTACCACCG
GCCCTGCGCCCCGGGGGGAACCGTGTACGACCCCGCCAGTCTCAGGTGTA
TGTGGCCCCACGAAGTGTCC
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000029 | genome | Sc0000029:829315..831462 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL96836_cuf10 |
| Biotype | protein_coding |
|
