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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL96832_cuf1 >transcript:BL96832_cuf1-protein ID=transcript:BL96832_cuf1-protein|Name=transcript:BL96832_cuf1|organism=Branchiostoma lanceolatum|type=polypeptide|length=173bp
SDAQICDNRLQLSWYRFDSPAGNEMPTSCVPQYHCGTTFPVWMRGQHPNI
VGDIEEMEVCINAEHEPNNCCYSYGTTYVKKCAKDTDEFYIYYLGRLPSC
YMAYCAGDRLQCASGTTSLNGDGYSPCADSDFPVFDQVEMEGPTPTTLPT
DNPGHFYFECVVTYAPDIEAQKE Run BLAST on NCBI mRNA from alignment at Sc0000029:2177079..2201352+ Legend: five_prime_UTRexonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL96832_cuf1 ID=transcript:BL96832_cuf1|Name=transcript:BL96832_cuf1|organism=Branchiostoma lanceolatum|type=mRNA|length=24274bp|location=Sequence derived from alignment at Sc0000029:2177079..2201352+ (Branchiostoma lanceolatum)
CAGCGATGCACAGATCTGTGACAACCGACTGCAACTTTCCTGGTACAGGT
TTGACAGTCCTGCTGGGAACGAGATGCCGACCTCTTGCGTACCTCAGTAC
CACTGCGGCACAACGTTCCCAGTGTGGATGAGAGGACAGCACCCAAATAT
CGTGGGTGACATAGAAGAAATGGAAGTATGCATTAATGCCGAACATGAGC
CCAATAACTGCTGTTACAGTTACGGAACGACATATGTGAAGAAGTGCGCT
AAAGACACAGACGAGTTCTACATCTACTACCTTGGCAGGTTGCCAAGCTG
CTACATGGCATACTGTGCAGGTATTGACTGATCAATCATGTCGCCGTAAG
GCTGATGTTAAAAATGCTTATGTAGATTGAAGGCAACATTTTTTGCAGAT
AAGGCTCATTCAAAATTTTGAAAAAAATAGAAACCAAGGAACATTAAAAG
GAAACATGCATAGGTTTTTCCTCCCCCCCAAAAAAAAATTAAGAAAAAGC
GAAAAGAAAAATTAAAAAGGGGATTATTGAAATTACACTGCACGAAATGG
CCTCGTATCCCGGCGATAAAATTAACGGATAAGCCAAATCCGCACCGGGA
TATGGAATATTTCCGGAGGAATCCCTGTACGTATACGCCGGGATACGAGG
CCATTTCGTGCAGTGTTAAACATATTAAAACTGATCAGTCACTAGTTGGT
AACGGGTTGATGGTGTTTTAGTTTCTTTTTGTCTTATTCAAGTTATTTTT
TTAGCATGTCCCAGATATATATTTTCCAAGCAGAGGTTTTGGTCGGGGGG
TAGTAGTGGCCGTTTTTTTTTTACGTTGGCCTCCCGTAACCTCTGCCTCA
GAACGCATAAGGGCGGGGCTGTTCTTTCAGAATCGATGTCGCTGCCCCTC
CCTGTGTACCATTAATTTACCGTTAGGCAAAGAGTTTTACTGCCCGGGGA
TTAACGCGGATCCGGTAACTTGGGGGAGTGTGCAGCCAGCCGCGCGGGCA
CCCCGCTGTCTCCCCTACAATCAGTTTGAATGGCTCCCGCCAGATTGAAA
GCATCGTAACATAAAGTAAAATTTTTACACATGATAATAAATGTTTCAAA
AGATATTACATAAATAAAACTTAGATGTATAATTACATTAATAAATGAAC
TCATACTGTATACATTTTGTACATGCCAATCTGAGGCTGAACCTGATATA
CTGACATGGGAAAAACGTACATGGATTGCAATTACGATTACAGCTACATG
CAGTGAGCGCCAGCGGAAAATGGCCACCCGCGTGGCTAGCAGCAGTATTT
CTGACAAAGATTGTGGCTGATTTTGTGGTTCTAAAGACTCCACAATGGCA
TACGAGGAAAGAATCAAAAGAATATATGTACGGTAGACAATTTCCTGGTT
TGAACTTTGTATTATTGTAATATATTTTGCACAAGTAGCCGGATATTTCA
AAGCCTTACTTCAAAGCCAGACTTAGCGCCTTTGTCATTTTTTCAGCGTA
TTTTTAAACGAGCAAAATAGATCAGTACATCGACTGTGAACAGTTATCTA
TATAACCATCAAGAGTAAATCTTACGTACATATGAGTCTGAGAAGTAAAG
TGTCAGCTGTGGGGAGGATAAAAGAATAGAAAACAGACTTGTAAGTCCAA
ATTCTGACGCTCTATATCGTCTCGCTAGAGCTGGTGTTTTTGCACACGAT
TTTATGCGAACTCCTAGTAAGCATTATTCTGTTACACTGAACAATCTAGA
GTAGTTCTACACGAGCATTTTTTTTCCCAAACGTATACAGTGGGTCACTG
CGTTTCTGGACAAGCAGACCGGAAACACCCGTGGCGCGAGGGCAGAAATA
CTAAACTCCCTTGGCACAGTTGCCAGACTAAGCACCTACTTTCAAAATGG
CTTTTATATATCAAAATGATTCTATTTAAAAGCCTTGATCAGTTCCGACA
TCTCGCAGAGGTTACGGGAGGCCAACGTAAAAAAAACCCGGCCACTACTA
CCCCCCGACCAAAACCTCTGCTTGGAGAATACCGGATATATACAAGATAT
CATTACATCTAAAGTTTAAAAAAAATCTATTGGTCTTTTTAAAAACAAGT
ACCAAATCAAATCAAAAGTGTTACATATGTCATGCCTGTAAAACTTTTGG
CATAACAATTATCTCGTTATAATGAGCTCCATACAGAAAGACCGATGAAA
TGTAAATGCCAGACGACGTACTATCTTGAGCCTCCTTAGTATTTTTCAGG
CAATAGATAGTCTCTTTGGTTCTCTTTCAGTCTAATTTCATGAAGTCATG
TGTACTTCAAATAAATACGTAATATCACACAAACTTAAAAGAATTATTAA
AGGACGGTAACCACATAGTGTTGTTGATTCTAGTGGCATATGGAAAATTA
AAGCATAGGTTGGAACTTTGATAGTATTCACATAAAATATTCGGCTAGAA
CACTAGCTGGCACAAAAAGTAACATCATGATTTGTTTTGTGAAAAGAAAT
CGCCATTGGCTTTGTGCAGTTTGCAAAGTAAACCTCTCTGTACACTCATT
CACATATTTGACGTTTACATTCACACATTTTCTGGGTTGCGCGATGTCAC
ATAATTGATTGACATTTTCGAAGAGTTTCTTATACAATGGCATTTATAGA
TTCACATTTAAAAGAAAACTGCATATTTCTAATTAGAATCATATCCTATC
ACTTTTTTTACGTATGGGGGTAAAACAGATTTCGTTGGAATTTTTAGATT
TATTTCTTTTACACTTAATTTTAAGAATTTTTATTCTTTTTTAATTTTTT
AAGGGGACAGATTGCAGTGCGCTTCAGGAACAACTTCTTTGAACGGCGAT
GGATACAGTCCTTGTGCAGGTAGGCTATGCCTGTTTCCGTTTGATTCCAT
TCCCTTTTTATAGACTTTACATTTATAAACTGTATTTCTTTTGGCAAGTA
CAAATGAAATAAACAGGATAATACTCTTACAATAAAACCATGTTAAACCA
GTCCAAGGTCAGGGGATGGAATGGACAAGATCTCCTCTTAAGTGATTGTA
TTTAGATCTTTAATGAAATAATGAAATATTTGATTTTTAAAAAAAGTTTG
ACATGTGAAGAAGATTTTAATTATAGCCTTTTGTGGTGCAAAAAGTGGTG
ACCAAATAATGTGGCCGTAAATGATATACATACCTTTGAATTCGACCGTT
TACAACATTTTCATTTTGTAACGTATTGACAACGTAGTAGCAACATTTTG
TTCCTCGGGGAACTCTGGAAACCTTGTATTTAAGTATGATTCGACCATTA
ATCGAATATGCAGATGTTGTTTGGTGTAGCCTCCTCGGCAAAGACTCAGA
TTTACTCGAATCTGTTCAAATATCTGCGGCACGGGTTTGTACTGGAGCCA
TGAGAGGCACTAAACACGAGTCTCTGTTAGCCGAGGTTGGATGGGACACA
CTGGCTATCAGAAGACAAAAGTATAAGCTGATCCAATTTTGGAAAATGTT
GAATGGTTTCGTACCACAGTACTTACAAGACCTTATCCCACCACGTGTTT
GTGACATTGTCCCATACAATCTCCGTGCCAACCAGAATTTTACTTCCATT
GCTTGTAAAACTGAAAAGTGTAAAAAAATCTTTCTTGCCCTCAACTATTC
ACTTGTGGAATGAACTGCCCTCTAATGTCCAAGCATCGCTTACGATCAAC
GTTTATAAAAAGGAACTGGAATCACATTTTAATAGACCGATCAAACACCC
ACACTTCTCTCATGGCCAAAGGCATCATGCAGTTCATCTTACAAGGCTTC
GTTTAAATTTCAGTCAGTTAAACCACCACCTATTTCTACACCATTGTATA
GATTGTTCTACATGTAAATGTGGCCATTATATGAAACAACTGAACACTAT
CTCCTACATTGTAAACTTTATACCACCCAAAGAAGTAATATGTTATCATC
TCTTTCCAACATAACTGACCTCCAACACCTTAACGACAGCTCATTATGCT
TTATTCCGTTACGCGGTTCCACATCACTCTCATACTTACAAAACTGTAAT
ATATTCGACATAGTTCATACATCCATCGTACAGGCAGATTCATTTAGTGA
AAGATACCAACTTGTACTGTCTATTGTTAATTTTCTTTTATCCATTTTGT
ACTTATGTATGTCAGTGATTGTCACTATGTCTCTTTGTTGTATGTGTTGA
GTAGAAGGCTTCATATAAGCAATCGCTTCCTGCCTAATACTCTATAAACA
TATACGAATAAAACAAAAAATGTAGTAGGGAACCTATCAATTGACATTTT
ATAAAGCAGCAATAAGATGCTTAAAAGCAGCGCTTTCAAGTACCCCCGAT
GTATTGGCCAAATCAACATTGCTACACTATGGCATCCTTTTTTTTTCTAT
GTTGAAGAAAATTCCAGAAAGAAAATCATTCCAATGTATAAGAATAAGAA
AGGATAAGAAAAAGTCAGTGAGGACGTATACTTTTTCTTAAAATATTTTT
CTTTTACCAAGTTGTTTTTTTGTCACATATATGTTACTAGAAACTTCAAG
ATAAGTTTTCTTGTTTTTATAACTCTTCTGTGGTTCAGAATATGTTTAAA
TATATCAAAATAATTTAAGAAAACATTAATGTCCTCACTGATTTTTTCTG
TCTTCAAGAATGAATTCCTTAAACCTAGAATGTGTTTCTTGTACTTAGAG
TGAGGTTATTGTACTAGAAATACCTTTCTGTCCTCAGGAATGAATTTCCT
ATCCTATATTGAGTTTCTTGCACTAAGAGTGAGGTTATTGTACTAAAAAT
TCCTTTCTATCCTTAAGAATGAATATCTTAAACCTAGAATGAGTTTCTTG
CACTAAGAGTGAGGTTTCTAGGACTACCTTTGTGTCCTCAAGAATGAATA
TTCTATACCTAGAATGATTTTCTTGCACTAAGAGTGAGGTTATTGTACTA
GGAATACCTTTCTGTTCTCAAGAATGAATTTCTTACACCTAGAATGAGTT
TCTTGCGATTAGAGTGAGGTTCATGTACTAGGAATATATTTCTGTAATGA
ATGATGCATTTCCTACACCTAGATCGAGTTACATGCACTTACAGTGAGGT
TCATTTTCTAGGAATACATTTTTGTCCTTAAGAATTAATTTCCTACACCT
AGAATGATTATCTTGCACTAAGAGTGAGGTCCTTGTTCTCGGAAAACTTT
CTGTTCTCAATAATGAATTTTTAAACCTAGAAACAGTTTCTTAAAGGAAA
GCTACACAAAAAATTGAAAATTATTCTATGCTATGCTTGATATATTCCAA
AGTCAAATTCTTACTTCAAGTTGTTTCACATGAGTCCGTCATAGTTCTAG
GATTTTCCACAGTTTGCAGCTTATGCCGTGCTGACGCCTTCTCACCTGAT
TATTGAATTATATGATGTCAGTGTTTCAAATTTTTCACCTGATTATTGTA
TTATATGACGTCAGTGTTCTAAAATTCAATCATCAGGGGAAAAATGTGAA
ACACTGACGTCATATAATTCAATTATCAGGCGAGAAGGGGTCAGCACGGC
ATAAGTTACAAACTGTGGAAAATCCCAGAACTATGACGGACTTATGTGAA
ACAACTTGAAGTAAGAATTTGACTTTTGAATAAATTAAGCATAGCATAGA
AGGATTTTCAGTTTTTTGTGTAGCTTTGCTTTAAACTTGGATTGAGGTCT
TGAATCAAGAATACTATTCAATCAATGATACTGTAATATGATTATGTTCC
AATCATATCTATTATCAATTTCATTACTTAATACACGTTTTGGGATTTCT
AATCCACATTTTTAAAGATTGCAAATATCAACCACTTTGCAATACAAATG
ATTCGATATATATATATATATATATATATATATATATATATCGAATCATT
TGTATTGCAAAGTGGTTGATATTTGCAATCTTTAAAAATGTGGATTAGAA
ATCCCAAAACGTGTATTAAGTAATGAAATTGATAATAGATATGATTGGAA
CATATTACACATTTGATGTGATAAAAGCATATTTTCTCTGTACTCATACA
ATTAACTAATTGTCCTTCTGATACTGTCAGTGCTACAGTGTTGTAGCTGT
TCTTCTTATAGTCAATGACTTGCATATAATTGTTGAAAGATTTTCCAAAC
TTGAGATGGGGGCATCTATTTGGTCAAACATGTCCAAACCTAGAAAAACA
CACAAAGACTATGGCTGATTGTCATTTCCCTATAACGACCCCCCTCCCAT
CCCTTTATACATGCATGCATGGGGAGGGGGGATCGTGCATCAACATCACT
GATAATAGTTTGCATTGATTGAAATGTTATACTTTGACTTTTTTTAGTAT
CCTGTAGGTATTACTGCACTAAACGTACATGTTCCGCAATTATTGGTTGG
CTGTATCATGCAACCACGAATACAAAACCAATAGTATTTACTATTTGATA
GTATATGTACTTGGATATTAGTAATTTTCAAGACAGGCTATAACATACCT
GGAGCATATCTGCTGCTTGGCATTTGCCTGAGGAAGCATTGACGCATGCG
CACTTTGTGAAAGTTTGTATTGAACTTTGAATATACTGTTCCCAGGGCTA
ACCCTTTGTAATAGCCTTCGGCTAGTTGAGTAGTCCTGGCTGTACTTTCC
TACAGTCAAATAAAATCAAATCAAATCAACTTAAAACAAGTCAGCCACGC
TGAGTCCCACGTGTTACCAAAACGTGTCCTCGCAAAACTAGCCACATTTT
CCCCATGTTGTTGTCAAATCTAAGCGCACATCACGCAAATGCAGCTGGAG
TCAAAATTCAACCGTCCAAAAGCAAAAGGATGATGGGAGAATTAAATTTT
CCATTATCCTTAGTAAAATGTACTTTCTTATTACAAGAAAAACAAAAATT
ATCTTTCTTCAACTTTCTGGAATAGCAAAGGAAGAACATTTGGGAATTTT
TAAGTCTTAACTTGTTTTCCAGTCTTTGATTTTCTAATTTTTCTTAATTG
TATTTGGTCAAGAAAATCCTTCCATCTTCTTAAATATTGCTAAGAAAAGC
GAGAATCATATCTCTCAGACCTCTTACATTAAGATGACAAGAAATGTCAA
GAATCCTTTTCTTTGTTAAACGAAATTTTAAACAAAAATTCATGTTTGGC
AAGAATAAAAATCTTAAGAGTAGATTCTGTAAGATACTCCAATTGACCAA
ACAAGAAGCAAATATTGTGTGAAGAATAAAGAAGAAAGCTCTAGTGCGAT
AATGCCCGGTAAGCCTGGTCCTACGAAAGACTCATTAATAAATTATAATG
ACATTGAAATGAGCTAAGGTGCGATTGGAAAGGCTATAATTGAGTGATAA
TTGCTGTGGTTGCACATCCCACTGCTCCTCCTGTATTTTGCATTCCTATG
CGCTAATTGCATACCCTGCCAGGCGCCCCCCTGAGCACAGTCAGTTAGAA
AGTTCCATCCAAGATGGCGGTCTGTGTGGGAAACAGCGGTCAACCAAACC
AGAGTGTTGCTTGGAAACAGTTTTTCTGTGTGTTGAGTTTGTTTTTTCAT
GTTAATTGTGGACAAAGACCACAGATTGCCACATCGTGGCCATTTATATT
TGGTACGAATTGGCAACAATGGACTCTAGTCAAGCTGATGAGCTATAATT
GGTGTGAACAAAGGAGTTCTTTGCCATGTGTGAACGAGGCGAGAACGTGA
GGTTTAACTTTGCAAGTTGTGTTCATTGTATGTACTGTCATAAACATCCT
GTAACTCTAAATCTGAGAAAGTTGAGAAACAAATAGTCTTGTTTACAGTC
AGGTATGATCACAAAGGCCTTATACAAAAATGCAAATGGCAGGTATTTTG
CAACCTTGAATTGAAAGAGAAAGGTATGATTTGATGTCAGATGTGGCAAA
AAGTTTAACAATCAATGCAGAGACGTCCCTGAAAAAAACCCTCAGTTATC
TGTATTTGGAAAATTACTACTTTTTATTAACCTATTAACCAATAGGGTTA
TATGGACGTCTAATATAACCTCATTGGGCTAACACAGGCTAACTTCTCAG
CTCCATTGCCAACATGAAATGAGTGCAGATGAACTGAGTTAGACCCTGAA
ACCCTAGGCTCTACCATCCTCCGCGGGTTGCTGGGAAAATGGTAGAAATT
GGCCAAATAGAGTCAATTGTACGAAGGGATTCGGCTACGGAGATAGGGTC
TAATATGGCTGCGAATGTTACCCTCCATGGCCAAAGTCCCCCGGCAAATG
TTCTCCCTATAGCCATGATAGCCGGCGCGGTCAGAAACCCCGCGGAACGT
GAAACTTGTGTAGAATTATCACGTTATGCCTTAGGAGCAGGACTCTATTA
CTAGTAATTCCCGAGCCGAAGAGGTATGTATATTATATAAACCAAGGAGG
TTTGAATAAGAACATTTACATGTTACATAGCCTGTCTACCATCCGATTAC
TACCTGGGCTCCTACACTCGCTACCCTAAAGTAAAACAAATAGCAAGTGT
AGGAGCCCTAGTAATAAGATGCATACGGCATCCAGGCTAACGGTTACATG
CTTGTTCATCTGTAGACCCTCTCAGGCTTGCCCAAACGCATAGGGAAATT
TGGAAACTTTTTACGTTAATGAACTTGAGGCCGAGGGGAATAGGCTGCTA
TTTGACTATGTGTCTCTTTCCTTCTTTGTTGTAGTCAGTCAGTCAGACAG
AAGTAGTCTTATAGCATATGTAGGAGTCAGCTTTTTTTGCTGCACACAAT
TTATTACACAGCGACTTTTGCCTCATATAGGAGAAGGCAAAGTCTAACTA
AAGACTAAAAGAGATAAAATGCATTTCCTTAGAGATGTGGGGTCAGATAC
AAATACAGTCTACCTTTACTAAACAATCTACCGGTGTACAACAAAATGTT
ACTGATATGAATATTCCATGCTATGCATTTACACATAGCATTTTATTTTC
TTTCAAAATCTCTATGGTTCAAGTCGCAATGCTGACAGCTTTGTTGTTCT
GTAGGGGTACAACGTTTTCCTGTTTCAAAAGACAATGTGTTTTGATGTAT
TCTATGAGAACGTAAGCAAGGTTTAGTGCAGGCAGTCCTGTACTGTACTG
TGTGCGCACAACGTAAATTGTTCACGTTCTTTGTGTGTTATTATTATTTT
CCGATTATGTATTTCTCATGGCATTTCTACTCTTAACAGTTCTTTCCAAA
AGTTCTACTACAATATAGATCCCCCTTGACTGGTCAGACTGCGTCTTTCA
ATCAGGACTTGAATGAATGCTGTCTGCCCTCTATGCATGAATTAAGATAA
TTGCAGAGAATGAGTTCGTGAGCGGGTGTGAAAACAATTACTCTATTGAG
AGATATGCGGCTGTCAAGTTGATGGATGGGCTAGGAAGACCAAACTCTGA
AAAATTGAGGGTTTTAGACTTAAAAGCCTAAGTTAGGTTCGTAGCTATGG
CACACAAACTTGTAATTGGGCGTAAACAAGGCCTAAGGAGTTACTTTCTT
TCAGAGTCGTTCCGAAGAATCGATTTCATCTTGCAATATTTAGATAATGG
CTGATAAAGTTATGGTCACCCCCACAAAATGATCCAAAACAACAAAATTA
TTAATATTTCTCTAAACCTGAGCAGTATTCTAATTTTCAGAGAAGACTTC
CTTGTAGCAACTGACTATCACTACATCCTGTAAAAAATTCCAGATTCCAG
GATCTTCGCAGCAACCTTGCTAGGTCAGTTATTGTAAAAATGATAACGAT
CCTATATTTATGAATTATGAAAATAACATGAGTCTATTTCCAGTATGTTA
TTCATAGCTAGAAGGAGTAGTATCTAGGCAAAGTTTCCTCCAAATTTCAA
ACTTATATATGGCGGTTTGTATCCACCCTACCGTTCACTCTACTTCAGGT
CTTAACCAGGCATGGTCAAGTCTTATCACACTTGAGAGATTGGCTTAAAT
TTCTAAAATATTCTTACTGATAAAAATCATACTAGAAATACTCACTTCAC
CAACGAAAATAAGAACGTAAATCTTTATGTAAAATTTAACAAACAAGGAT
TGTGCGTAAGATATCTTTAAAATCTTAATATTTCTCTTCATAAAAAAAAA
GAAACAAAGAAAAACAAGAAGTAGCATTTTTGGTAGTGTAGCTTATTACA
TTCTATGATACGTTTATTCAGTACTGATAATTTCGCAGGCAACACACCCT
TATTTCAATCGTTTCACAAAGCCTTTACAACATAACCATATTAGAACTAT
GACTTGTAACACTGAACTGAAATAAAGTGAGCCAAAAAGATTGATCTAAG
ACGTTTCTGAAAACCATCGTGCATTTAAAATCTATGAATAAATGGTACTG
ATGATTTATTGCCCTGTTATTGAGTCAAATTTTGCATTGAAGAAACAAAT
TGCTGAGCCTCTTAGGGGCTTTTGCCACACTGATTGCACTAGAGTTACTG
AGTATGAGTCCCCCGGCTCCTGTTCTTGTTGGCGGCACTAAGTCAAGCAG
CGGTGCCTAGCTAACGTATTACTTCAATATCGTGATATGAAGGAAGCATC
TTCAAAAAGGCTTCTTCACTCCATTCAGACTGTCATCCTCGACCAGTACG
CCTACACAAAGAGTTTATTAAAGACCCTGGCTTTGGTTGGAATGCTGCAA
ACATGGATGACAGCAGTGGCCCGACCTGAGAAGAGCGACCTTCGCTTACA
CGAGTAAAGTGTTTGACCACGTGGACCACGCTCGACTTCTGCATCGCGTG
ATTGACATCCACGTTAGCCGTCGCAAGCAGAGGCGGATCTACAGCCACCT
TCTGAACTGCTGGTAGAGAGTCGTGGTCGACGACGAGACCAGCTCTTTTC
GTACACTAACGCCGGTGACGCATCGATGGTTTCTTTCCCCTACGACTTCC
TTCTGTTCATGAGCACGTGAATCACAGTCATAACGGCTCCATGAACGTCG
GTTATGCGGATGACCTCACTTTATTCAAGAACTCTCTCTGTGCCCTTAGC
CGATCAGGCCACAGCTGTAGAGAACGCGTCTTCACACTGTTATTTCAGAG
CAGAAGACAACATGATGACGTTGAATGGTGTTAAGATAAGAGCAAGCTTA
ACCAGACCTTTTTTAGCAGATCTGTTGCAATTACACCCACGATCACTCTC
AGAGCAAGGCGAACCAGCACCATCTGTTGACTTTGCCAAAAGACTCGGTT
TCTCCATAGACAAGAACCTCAACTTCATCAAATAGGTTACTTCAATGAGT
AGCAAAGCACCGAGAATTTATCTGACACTAGTTAGGCCGGTACTCGAGTA
CGATCTTGTGTTACAGGTTGTTTGCACAAAGGAGCAGAAAATGGCCATTG
AGAGAATCAAATAACGGGTCTTTTAATTATAATTTCATCGGAGCAGGCCA
AGCACGGGAGGGGGGGGGTAAAATCTAAGTCTCTTCACAAAGACCTACAA
ACGTACCAAATATCAAAACAGTCCACTCATGCATTTTTGGGTCATCGTGA
TGACACACACACACACATGCACACACACACGCACACACACACACACACAC
ACACACACATACATACACACACACACACACACCACACACAGACACACACA
CATACACACCACACACCACACACACACCACACACACACACACACACACAC
ACTGCTTTTTATATTACACTGAACGACCGGCACACTTAATTTTTGCACAT
CTAACTACAAGCGTTGTTTTAAATTATGTAACGAGGATGATCACTTTTTC
TCTCTTTCTCCCTCTCTCTCTTTAATGTAAGTGAATTTGGTTAAACGTGC
CTGTTAAAAACCCGTTGCCATGGCAACACAAAAATACTAAACTTATACTA
TTATGATAATTAAAGTTGGTGCCAACTGTTTTCTAGGGAAAGTCACCGAC
CTTGGTAGAACAACACACGTTGTTTAACAGATATACGGCACATTCACTGC
CTTCTGTGGGTCCCATCCTTGTGTTGTTAATGTTATGTCCTGCTGAAGTT
ATGTGCAATTGAGAAGGTTTAAAGTCCACGCCTTCATTAACAAAATTTTG
TGGCGGTGTATTTCGACATAAATTCATTGCTCTATATTCCTCTATGTGTG
TACATGCATATTTATACCAATAAATTGTTTTCACTTACACCAAGAGTATG
TACGCAAATCCACATATCCCTACGAATAGTTGTTTATCCTTTCTTTAGCA
ACATTTTTTTATGGTTGTTTGTGTCAGTGTTACAGTACAGGTGACGAAAT
ACGCATCAGAAATTTGCGGTACCTAACGGGGGTTGCCCTACCTTAGGACG
CGCCCTAACTTAGGACGGATTTTTTAGTGATCTTGTTATGCATAAGTACG
CCGTGTTTGTGTCCACTGACTATGCTCATAAGGAAGATAAATAAACCAAG
TCCATGCACATAATTTTTATTTGCATTAAAAACATATGTGTACATATTCA
TTTCTTGTTTTGTCGAGAATGGTATTTTGACAATAATGATGGCAACGCTG
AGTAGAGGGTCACTGCGTAGCTAGACGGCCAGGCACCTAAATATACGACC
TGTGCCAAGCAGATACATAAGTCACACAGCTATCATACACATAAGAAAAA
TAATTTCATAAAACACTAAAAATTTGGGTCTTTAAGTGTTTGTTGAGAAG
AAAACCGACCAACGAGAANTAACGGGGGCCGCCCGAACCTCGCACGCGCC
CGAACATCGCACGGATTTTTTACTGATCTTATTTTGCATAAGTACGCCGT
GTTTGTGTCCAATGACTATGCTGATAAGGAAGGTAAATAACCCAAGTTCA
TGCACATAATTGTCATTTACATTCAAAACATATGTGTACATATTCATTTC
TTGTTTTGTCGAAAAGTAGTATTTTGACAATAATGATGGCAACGCTGAGT
AGAGGGTCACTGCGTAGCTAGACGGCCCGGCACCTAAATATACGACCTGT
GCCAAGCAGATACATAAGTCACACAGCTATCATACACATAAGAAAAATAA
TTTCATAAAACACTAAAAATTTGGGTCTTTAAGTGTTTGTTGAGAAGAAA
ACCGACCAACGAGAAACAACGTAAACATTGCTGTCGTCTGACGACGTTGT
TTTCCCGCCATTTTTTTGGGCCGCGATGGTGGCCCGACCTCCCAGACTCC
CGCGGCAAGTCCCATGCATCGCAGTGTGTGCTACTTACCTTCCACCAAAC
TCAAGACACCAAGAACTTCTCCTAGATCACCTGGTTGACACAGCTGATCT
TCTGAAAACGATGCACCCCGACATTGGGCTCATATTCGCGGGGGATTACA
ACAGGCTGGACTACCAACGCCTTCTCTGCTCACATCAGCTACATCAAGTG
GTCAGCTCCCCGACCCGTGGGGAAGCAACACTAGACGTCATCATCACCAA
CTTGAAGTCTCACTACAAAGCACCAGAGGTGACTAGCCCATTGGGCACAA
GTGACCACAAGGCTGTTTGGTGGCAACCAGGGACTCGTATGCGGACAACA
AACAAGACCAAGTACGTGGTCGTCCGTCCCATGCCTGACTCCAGGGTACG
GGACTTTGGGCAATGGATTACGTCACACAGGTGGCAGGAGGTGCTTGAGA
AGGACACTGTTGAAGAGAAGACATCTTCATTCTACCAAACATTGCATTCA
GCCATAGACAGGTTCTTCCCCCAAAAGAGAGCCAAGCTGCACCAAAGAGA
CAAACCGTGGATAACTACCTCTCTTAAGTCATTGATACACAAAAGACAGG
TAGCCCACAGGAAAGGTCATGGGTTGCTCCACAAGTTCCTCCGAAACAAG
ATCATTCGTGACATCAAACGAGGGAAGAAAACATACTATCATGATCACAT
GCAGCACCTGAAGAAGTCAAGTCCGGCCGAGTGGCACAAGACCATCAGAC
AGATGGCAAACTGGTCAGCTCCTACCTCGTCCATCCAAGTGCCTGGCATA
GAACCAACTGACAAAGCAGGTGCAGCAAACGCGATCAACAAGCACCTGGC
GACCATTTGCCAGGCGCTGCGTCCACTTGACTACAGCAAGCTACCATCAT
ACTTGCCGGCTTCACCACCGCCCCAAGTCAACACATGGGACATGTTCAAC
CGTCTAAAACGGATTAAAGTCTCAAAAGCCCCTGGCCCAGACCAGATGTC
ACCCAGAGTGATAAAGGAATTCGCATTCGAACTCTCTACGCCACTGACCG
ACATCCTGAACGCGTCCCTGAGGGAGGGAAGGGTACCACCTGAGTGGAAG
GAAGCCACGGTAGTCCCTGTCCCCAAAAAGCAGCCAGCTGATTTGGACAG
TGTACGACCTGTTTCTCTCACGGCCCAGTTCGCCAAAGTCTGTGAAGGGT
TCGTCTCCTCGTGGATTCTGTCCGACATCTCATCTCAAATAGACTGCAAA
CAGTTTGGGAATTCCAAGGGATGTTCGACCACACATTGTCTTATAGACCT
GCTAAACTTCTTCTTCGCAGGGGCTGAAAGGAAAGCGTCAGTGGGCACCT
TGATTCTCACAGACTACTCAAAGGCCTTTGATCGGGTGTGCCACAATACC
GCCATTACCAAACTCATCAACATGGGAGCCAGACCATCGCTCATCCCCTG
GCTGTGCAGTTTCGTATCCGGTCGGAAACAACGCGTCCGCTACCAAGGGG
CACTATCAGACTGGGAGTTCCTAACTTGTGGAGTAGCCCAGGGCACTCTG
TTAGGTCCTCTTGTGTTTCTAGCTATGATCAACGACGCCAAACCTGTAAC
TACGAACTCACATTGGAAATATGTTGACGACTTCAACCTTGGCGAGACAA
GACCCGCAGCAAGAACAACGACCCTCCAGACTGACCTTGATGACCTTGAG
AGCTGGTCAGCAGACAACTCTATGATCCTCAACCCTAAAAAGTGCAAAGC
GATGCATTTCTGTTTCATGCGTCGACCCCCACAAGTACCGGCACTTACCC
TGGGCGGAGAACCACTCACTATTGTCACGCAGGCCAAACTGTTGGGACTG
CACATAAGATCTGATCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNCTGAAAGGAAAGCGTCAGTGGGCACCTTGATTCT
CACAGACTACTCAAAGGCCTTTGATCGGGTGTGCCACAATACCGCCATTA
CCAAACTCATCAACATGGGAGCCAGACCATCGCTCATCCCCTGGCTGTGC
AGTTTCGTATCCGGTCGGAAACAACGCGTCCGCTACCAAGGGGCACTATC
AGACTGGGAGTTCCTAACTTGTGGAGTTGCCCAGGGCACTCTGTTAGGTC
CTCTTGTGTTTCTAGCTATGATCAACGACGCCAAACCTGTAACTACGAAC
TCACATTGGAAATATGTTGACGACTTCAACCTTGGCGAGACAAGACCCGC
AGCAAGAACAACGACCCTCCAGACTGACCTTGATGACCTTGAGAGCTGGT
CAGCAGACAACTCTATGATCCTCAACCCTAAAAAGTGCAAAGCGATGCAT
TTCTGTTTCATGCGTCGACCCCCACAAGTACCGGCACTTACCCTGGGCGG
AGAACCACTCACTATTGTCACGCAGGCCAAACTGTTGGGACTGCACATAA
GATCTGATCTGCGGTGGGACGACCAGGTAGCCGAGATGGTGTCGAAAAGC
AGCAAGCGTCTGTTCCTCATCAGTAGACTGCGTAGATCGGGGGTACCGAC
ATCGGATCTAACCGTCATATACTGTGGATACATTCGCCCCATACTCGAGT
ATGCCGCCCCTTGTTGGAGTGCAGCACTCACACAAAACCAGTCCGCCGCT
TTGGAGCGAGTACAGAAACGAGCTTGCAAAATGATCCTCGGATGCCAGTA
TACCTCATACTCTGAGACCTTAAAGCGACTTGATCTCCCGTGCCTAGGAA
GCCGGAGACAGGACTTATGTACTGAATTCGCTATTAAAGTGGAGAAGTCC
GCACGCTTCTGCTCTTGGATGCCCCCTACCCGCGGCCAACAGCACGGCAG
GAACCTGCGCAACTCTGCCCGGTACCAGCAACCCTCTGGATCAAAGCGCT
ACAGGACGAGCGCCATTCCTGCCATTGTTGAACTGCTCATGAACTCTAAA
CAAACATGACTCTATGTATATGTATAAGCTGTATTCATGATATTGCCACG
GTTTAGATGTCAATGATTCTAGACCATCTAGTGACCGTATCTCTTGGGCT
GTAGTTTTGTTGCGTCCATTTCGGTGCCCATGAGGCCACTGTGATACTAC
ATATGTAAAGCGCTGTTTTAAAATCGATTTTTAACCAAGTNTTTTAATCA
AGTATTATCGTTGAGAGTTTTATAATGCAATCACAATGTCATGGTATGTC
ACCAAAGGCGATTGCGATGTGTGAAAATGTTTCTTTTACCGACCGTGTAA
ACATCCTCGTAATTCAGCCTCCCCAGGGGCTGCCAGGAGGATTGTAATCT
TGTTGTTCGTTTCTGAATAAAAACCAGTCTACTACTACTACTACTACTAC
TACTAGTTTTGTTACGCTCTAACATGTGATTGGTACCGTCTATGAAAAGG
AAACTGAATACAGAGATGGCGAAGATGTTTCCCAATAAGTAGACGGAGTA
TTGTTGATGTAAGCGGTGTCGTTTTTTCGTAATGATTTCGTAAGTCGGGC
CGCATTCAATACGTACGTATGGCCGCGTAGTAGCCTATTTCCCGTGGGAA
CATGAGCTGGGATGCGCTAGATATNACGCTCTAACATGTGATTGGTACCG
TCTATGAAAAGGAAACTGAATACAGAGATGGCGAAGATATTTCCCAATAA
GTAGACGGAGTATTGTTGATGTAAGCGGTGTCGTTTTTTCGTAATGATTT
TGTAAGTCGGGTCGCATGCAAGACGTACGTCGGGCCGCGCGCAAAGTGCG
TAGTAGCCTATTTCCCGCCAAAACATGAGCTGGGATGCGCTAGATATAGC
CCTTCTCACATGACGTTAGAAGTGCACACAGTCAAAATTTTCCGGTCAAA
AGAAAGCTAGAATATAGCAGACTTCAAGCCTTATTTACATTTCCCTAACT
TCATCACCAACTTCCGAAGAGAGCAAAATTACCAAAGCGTACTAAGTTAG
GCACACTATCTGGCGTAGCACTAAATCAGAAGGTACATTCGTGAAAACGT
CTCACAGCGTTTGTCGCTTGTAACTCGGAGTGTGAAGGGCCCATGGACAA
TATGAATACATTTCTTGTCCATGTATGTTCTTTAGATGAATGTGTTCAAA
ATTCATTCATTAAAACATGACCATTCTCTGACAACCAGCAATGGAGCGCC
TTGAGTTCGAGCGCGTAAAAAAACGTCCTATGTTTGGGCGACTCCCGTTA
TAGCAGAAATTCATTAAAACTTTTGCAAAACCTGAGTTGGTTCCGAAGAA
TTGGTCGCTGCGTAATGCAAAGTTGTCTGGACTCTCGGATTGCAGAAATT
CTTCCGCAGAAGAAATCTAGATTTTCATTAAGATTCCAGTTGTTTACATT
CTAAAATTTGCATGGTACGTGTTGGTCCATACACCCCTGGAAGAGTTTAT
TCTTGTATGAGGGGGAAATTTTCATAAATTTGATTTTGAGCTTGGTTAAA
TATCAAAAAGGTATTTTGGTGAAGTTTTTTTTCTTCAATTGCCTGGTATA
AAATTAATATGGGAAGAGCACCGCCATGCAAAGTTTTTCAAATTGGGAGA
GATCTATTTCTGACTGGTCTTTAATTTATTTCTTTATTCAAATACCGACA
TTGCAGACACACATCAAGTGTTAGCCTTAATGGCGTTGATATTTACAAAG
GTCATTACATGGTCTTACCTTACAATAGCTAAACGTTATTTTGGAATGTT
CCATTCTTGAATCGGAACAGTCAATTTTTGCATGGGGAGGAAAATGGGCG
ATATATGTTGTATTTGCTCCTGCAAATGTTGCCTTTCTAGTTAAAAAATA
AACATACATTAACAACATCTGTATGTGTTTTATGATGACTATGTACTGTT
TGTTTCGTAATAGAACGTTTACGAGAGTGTTAATTACCTTGCGCTCGAAA
TCAAGAACTTGACGTATGATAAGTAAGATTTGATATTCAATGAAACGTCG
ATGTCAAAAGGGTGTATATTTTGTACAAACGCCTACGTTCATTAAAATAT
ACTCATGGCGGTTCTTTGTAATCATGACGTGTAGCATTTCAATGCCCTTG
GTGATACAAGCACTTTTAAGTCACTAGAGTCATGGCTAAAAGGCTAGGAT
TAAATATCACATTGATTTTGTGTCTTTAATTTGTATTCAGATTCAGATTT
TCCAGTCTTTGATCAGGTCGAAATGGAGGGTCCAACCCCAACTACATTGC
CAACTGACAATCCAGGACATTTCTACTTCGAGTGTGTCGTAACATATGCT
CCAGATATCGAAGCTCAAAAAGAG Coding sequence (CDS) from alignment at Sc0000029:2177079..2201352+ >transcript:BL96832_cuf1 ID=transcript:BL96832_cuf1|Name=transcript:BL96832_cuf1|organism=Branchiostoma lanceolatum|type=CDS|length=1557bp|location=Sequence derived from alignment at Sc0000029:2177079..2201352+ (Branchiostoma lanceolatum)
AGCGATGCACAGATCTGTGACAACCGACTGCAACTTTCCTGGTACAGGTT
TGACAGTCCTGCTGGGAACGAGATGCCGACCTCTTGCGTACCTCAGTACC
ACTGCGGCACAACGTTCCCAGTGTGGATGAGAGGACAGCACCCAAATATC
GTGGGTGACATAGAAGAAATGGAAGTATGCATTAATGCCGAACATGAGCC
CAATAACTGCTGTTACAGTTACGGAACGACATATGTGAAGAAGTGCGCTA
AAGACACAGACGAGTTCTACATCTACTACCTTGGCAGGTTGCCAAGCTGC
TACATGGCATACTGTGCAGGGGACAGATTGCAGTGCGCTTCAGGAACAAC
TTCTTTGAACGGCGATGGATACAGTCCTTGTGCAGATTCAGATTTTCCAG
TCTTTGATCAGGTCGAAATGGAGGGTCCAACCCCAACTACATTGCCAACT
GACAATCCAGGACATTTCTACTTCGAGTGTGTCGTAACATATGCTCCAGA
TATCGAAGCTCAAAAAGAGAGCGATGCACAGATCTGTGACAACCGACTGC
AACTTTCCTGGTACAGGTTTGACAGTCCTGCTGGGAACGAGATGCCGACC
TCTTGCGTACCTCAGTACCACTGCGGCACAACGTTCCCAGTGTGGATGAG
AGGACAGCACCCAAATATCGTGGGTGACATAGAAGAAATGGAAGTATGCA
TTAATGCCGAACATGAGCCCAATAACTGCTGTTACAGTTACGGAACGACA
TATGTGAAGAAGTGCGCTAAAGACACAGACGAGTTCTACATCTACTACCT
TGGCAGGTTGCCAAGCTGCTACATGGCATACTGTGCAGGGGACAGATTGC
AGTGCGCTTCAGGAACAACTTCTTTGAACGGCGATGGATACAGTCCTTGT
GCAGATTCAGATTTTCCAGTCTTTGATCAGGTCGAAATGGAGGGTCCAAC
CCCAACTACATTGCCAACTGACAATCCAGGACATTTCTACTTCGAGTGTG
TCGTAACATATGCTCCAGATATCGAAGCTCAAAAAGAGAGCGATGCACAG
ATCTGTGACAACCGACTGCAACTTTCCTGGTACAGGTTTGACAGTCCTGC
TGGGAACGAGATGCCGACCTCTTGCGTACCTCAGTACCACTGCGGCACAA
CGTTCCCAGTGTGGATGAGAGGACAGCACCCAAATATCGTGGGTGACATA
GAAGAAATGGAAGTATGCATTAATGCCGAACATGAGCCCAATAACTGCTG
TTACAGTTACGGAACGACATATGTGAAGAAGTGCGCTAAAGACACAGACG
AGTTCTACATCTACTACCTTGGCAGGTTGCCAAGCTGCTACATGGCATAC
TGTGCAGGGGACAGATTGCAGTGCGCTTCAGGAACAACTTCTTTGAACGG
CGATGGATACAGTCCTTGTGCAGATTCAGATTTTCCAGTCTTTGATCAGG
TCGAAATGGAGGGTCCAACCCCAACTACATTGCCAACTGACAATCCAGGA
CATTTCTACTTCGAGTGTGTCGTAACATATGCTCCAGATATCGAAGCTCA
AAAAGAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000029 | genome | Sc0000029:2177079..2201352 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL96832_cuf1 |
| Biotype | protein_coding |
|
