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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL96830_cuf1 >transcript:BL96830_cuf1-protein ID=transcript:BL96830_cuf1-protein|Name=transcript:BL96830_cuf1|organism=Branchiostoma lanceolatum|type=polypeptide|length=106bp
EVRCPVGYQSPNLDFTPDCEDIDECATGTSGCSQLCENTEGSYYCRCHDG
YQLGPDNHTCTEPTPTPPSPDPCDSQQHTVLSEPLRSVGNVYQANQAPIC
DRNLVY Run BLAST on NCBI mRNA from alignment at Sc0000029:2068580..2071615+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL96830_cuf1 ID=transcript:BL96830_cuf1|Name=transcript:BL96830_cuf1|organism=Branchiostoma lanceolatum|type=mRNA|length=3036bp|location=Sequence derived from alignment at Sc0000029:2068580..2071615+ (Branchiostoma lanceolatum)
CGGAGGTCCGATGTCCAGTGGGATACCAGTCACCTAACTTAGATTTCACT
CCTGACTGCGAAGGTATGTTGAACCTAGAGTGTCTAAAGTTATTACAGAT
ACGATAAAAGATGCCTTATTTGCGAATGTCGACATTCCGAAGTGCGCCGC
CATTTTGGTATTCTGACACCTTCTGATGACCAAATACGTAAACTAGTCAC
TAGTATGCAAACTTCTCATATGTTCCGCCGCCTTTCTTGGCTGCATTCTA
ATATCATTATCTTCAGTTCCTATCTAATGGATATTAGGCCACACCATCTT
AATTCTATGGATGACGTCCCTTACCTTGAATCTTAATTGCCAGGTATCCG
ATCAAGCGCACAGTCTGTCAAGGTCGCTCTGAAGAGTTTGTTGGTCTAGA
TCAGTATGTATGGGACGGTGTACCGGGCAATCATTTTCAAAGAGACGTAG
CTGAGATGATATGCCTTTGTCAATATCATTAATGTACAGTAAAGATAGGA
GGGATGTCCCTTGTGGCACTCCTGATTTGACCATGGTAGGTTTCGATATT
TCCACATCAACCATTACCTGTTGTTGTCTATCGAGAAGCCAGTTTGCAAT
CCATCTCATGTTTGTACCAAGCTTATTCCATTGAAATCTAATTTGTTAAG
TATTGGCATGTGTGGTACGCTAAAACAGGTTTTGAAAATCTAATATGACT
AATTCTATCTGGCATCCTTGATCAAACCATGATGTGATATTGTTATGTGC
AGATTGACTAAGACTCACAACAGTGATTCGCCCGAACTCCATGTTGGGCG
GGTAGGAGAATATTGGGCATATCTAGATGTTTCATTATTGCCAAGTACAT
TGGTGTGGTCATAGATCAAAACAAAACGCGAACTTGTTCGCACTTGCTTG
TAAAAATGGGCCATAATGGGTGCATGAATTCCAGACAAAGGTTATGCTTC
ATGTTATGTTTTGTGTTGTTTTTTGGTAAATTATTTGATTGTGTTTTTCT
ATATATGTTTGACCTAGATGACCCGAGAAGTACGTGATTTATATTGTTAT
GAAATTGAACTATTGTGTCTTGAATCTATTGAATAGATAATCTAAATTGG
GGCTTGATAATCCTTTCCTTGACAGCACGAAGAAACTCAGATCATTGTAT
ATCATGTTAATATTTCAATACTTCAACTATTGAAATAAGAACATGTTTTC
ATAGTCCTTATTCTCTGTGTTTGATAATGGAGATCTGATATATGACACAT
ATGATCGAACTATTTATTCCCTTAGTTACATAGTTGTTAGGATAAGTGGT
AATGCATCAGAGGTCGAGGGTTGAAATTGATATTTATGACCGTGATAAAG
ATGACCATCATTGCATATAGATGGCGGAAGGTCAGTTACATTTTGTGTAC
TAGCTAAGAGTAGATTATGATTGCATGTATTTTTTAACGAAGAGCCATGT
GATAATCAACGAGACATGCTATAATTACAATAAATGAGGGATTTTCTATT
TTCTATATACGCAAGTTAAATCGAAGATAAAGTCACAAGATATATTTTAA
AGGGATTGTAGTGTTTAGGTAATGTGTGGTGCCTGGATATTTTATCCTGC
CAGAAATTCTAAACATGTATGACTTCCTGTGACTTGAACATAACGTGTTG
TTCTCGCATTCATTGACAATCATAGCGTACGTCTGTACAATTCCTATTTT
GTATTTGATTTGAATGACCTTAATATCTCCCCTTCTGTATAACCAGTGGA
TGTACTAGTGTAGGTTATTGAAAATGTATAGTGTACTTCGCAGTCGATAT
TCGTTTATCCTTAAGTGAATTGTACAAATAGCTCATCGTTTGCACTAGTT
TTAAGTCGATTTGACTTAAAGTCTGTTCATCTGTGCTCTTTACTTTATTT
ACCATTCGTATCATGTGCTCAGTTATTTCTCACTAGTCTAGAGAAAAAAT
AGGAAAGACAATACGAAGAATCTGTACCGTTTTGCGACTTGCTACACAGT
TCGCAACCATTGCATCCGTGCACTAATGTTCCCCATGTCTAACCCTTGCA
GACATCGACGAATGTGCCACCGGTACGAGTGGTTGTAGCCAACTTTGTGA
AAACACAGAGGGAAGTTACTACTGTAGATGTCATGATGGCTATCAGTTGG
GCCCAGACAACCACACTTGTACAGGTTAGGTCATATTTCACAGATAACAG
ATCGATTGACCGGTCACCGGCTCCATCTTGTTGCAACAACGTACGCTGTT
GAACATATTATGTGCTGTCTATTTGAAGTTGAGAATTCCGCAAACAAAAT
CGATTTCATTGTTCTAAAACTTAAACATGGTTGTGGAAAAAGGAGGTTAG
CATATCTGTGCTAAATGCATCATGCGTACATTATAAAACAGTGTTGGCAA
ACATCACAGAGGGGACATAATTTGGAAAGAGCTTTCTCCAAAGCACACAC
GACCCTGCCCGATACACAGCTACTTGCTTGGTAACAAAGGAATGTTTACG
AACAAGTCTGCTCACTGCTGACAGCCACAGAGATTAACGAGGGTTAACAT
ATCAACAGGCCTAAATCAATTTGCAATCGATCAATCAATGACATAAAATG
CGTTGTGGCTTCAACATCATGGGAAAAGTATGTTTACAACATGTTTCATC
AAAGATTTTGAAACAGCTTTACATGAAACAGATTGAAACATGTCGAGCCC
TCATCATCAGAAGGCTTGTACTTGACATAAATAAATTGGAAGGATATCAC
TGTTTCTGAAAATCATATCCCAAAAGAGTCTAGTCGGTAACACTTTTTAG
ATTGAATATATTTGCATATCGTTTATGAGGAAGGTTGAAAATGTTCGTTG
CTTGCAAATGTAATATTACATGTCTTATATTTTGGAAAAATCGTACTCAG
AGCCGACACCAACACCTCCAAGTCCAGATCCGTGCGACTCGCAGCAGCAT
ACAGTACTGAGCGAACCCCTCCGAAGTGTTGGTAATGTCTACCAGGCCAA
CCAAGCTCCGATTTGTGACCGTAATCTTGTCTACGG Coding sequence (CDS) from alignment at Sc0000029:2068580..2071615+ >transcript:BL96830_cuf1 ID=transcript:BL96830_cuf1|Name=transcript:BL96830_cuf1|organism=Branchiostoma lanceolatum|type=CDS|length=954bp|location=Sequence derived from alignment at Sc0000029:2068580..2071615+ (Branchiostoma lanceolatum)
GAGGTCCGATGTCCAGTGGGATACCAGTCACCTAACTTAGATTTCACTCC
TGACTGCGAAGACATCGACGAATGTGCCACCGGTACGAGTGGTTGTAGCC
AACTTTGTGAAAACACAGAGGGAAGTTACTACTGTAGATGTCATGATGGC
TATCAGTTGGGCCCAGACAACCACACTTGTACAGAGCCGACACCAACACC
TCCAAGTCCAGATCCGTGCGACTCGCAGCAGCATACAGTACTGAGCGAAC
CCCTCCGAAGTGTTGGTAATGTCTACCAGGCCAACCAAGCTCCGATTTGT
GACCGTAATCTTGTCTACGAGGTCCGATGTCCAGTGGGATACCAGTCACC
TAACTTAGATTTCACTCCTGACTGCGAAGACATCGACGAATGTGCCACCG
GTACGAGTGGTTGTAGCCAACTTTGTGAAAACACAGAGGGAAGTTACTAC
TGTAGATGTCATGATGGCTATCAGTTGGGCCCAGACAACCACACTTGTAC
AGAGCCGACACCAACACCTCCAAGTCCAGATCCGTGCGACTCGCAGCAGC
ATACAGTACTGAGCGAACCCCTCCGAAGTGTTGGTAATGTCTACCAGGCC
AACCAAGCTCCGATTTGTGACCGTAATCTTGTCTACGAGGTCCGATGTCC
AGTGGGATACCAGTCACCTAACTTAGATTTCACTCCTGACTGCGAAGACA
TCGACGAATGTGCCACCGGTACGAGTGGTTGTAGCCAACTTTGTGAAAAC
ACAGAGGGAAGTTACTACTGTAGATGTCATGATGGCTATCAGTTGGGCCC
AGACAACCACACTTGTACAGAGCCGACACCAACACCTCCAAGTCCAGATC
CGTGCGACTCGCAGCAGCATACAGTACTGAGCGAACCCCTCCGAAGTGTT
GGTAATGTCTACCAGGCCAACCAAGCTCCGATTTGTGACCGTAATCTTGT
CTAC
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000029 | genome | Sc0000029:2068580..2071615 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL96830_cuf1 |
| Biotype | protein_coding |
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