transcript:BL96785_cuf5 (mRNA) - B. lanceolatum

Overview
Nametranscript:BL96785_cuf5
Unique Nametranscript:BL96785_cuf5
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

protein sequence of transcript:BL96785_cuf5

>transcript:BL96785_cuf5-protein ID=transcript:BL96785_cuf5-protein|Name=transcript:BL96785_cuf5|organism=Branchiostoma lanceolatum|type=polypeptide|length=399bp
MLATLARYNIVFATLCALAIPTYGSACLDPLGMESGVIPDESITASTTFG
SGPQPKDARLDKADGYGAWAATTNIVGQWLQVNLGEMRRVSGTIIQGRSY
PSKSHWVTSYKLQYSEDGISWRTYADSDGSDKVFAGNVDKNTPVTNLLDD
PVAARYVRFVAQSWHNHIAMRVEVLGCYGLVGLWPLNTLYGSSDVTGNGN
DGVATGTQLAPGPHGDVDGAFLFSGTTTSYLEIPNNGRLDVGFSFTILAH
IFPTGEAGPIFDYFGDNNAWGVHLWQALATTLYMRAGNRDGSHPTPSHAA
VLQQNTWNYVGGTYDSFTGVQAIWSDGEPGGEQHIGVAEVATQYPIRVAM
RDADSRVFAGRIACLQLYNYAMTKEQIISARDMCRACPISDYVNPCDSQ
Run BLAST on NCBI

mRNA from alignment at Sc0000201:368544..374040-

Legend: five_prime_UTRexonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>transcript:BL96785_cuf5 ID=transcript:BL96785_cuf5|Name=transcript:BL96785_cuf5|organism=Branchiostoma lanceolatum|type=mRNA|length=5497bp|location=Sequence derived from alignment at Sc0000201:368544..374040- (Branchiostoma lanceolatum)
ATACTATTATGACCGAATAAAGGACGGTACCGTAGAGGAGAGCAGTGTGC GGCCTGTAGTGCCAGGAGGAGTTGGGTGTTCTTACCAGGACATGAATGAT AACAGATCAGTGTTGTCATAGCCCGACATGCTCGCGACATTAGCGCGATA CAACATTGTCTTCGCAACGTTGTGTGCACTCGCAATTCCAACATATGGAA GTGGTAAGTAGCCAGCTGACACGAATTTTGTTTGTGTGTGTGTAGTAAGT GTGTACATGTGTTTGTATGTATGTATGTGTATGTGTATGTGTGTGTGTGT GTGTGTATGTGTATGTGTGTGTGTGCATGTGTATGTGTGTGTATGTGTGT CTGTGTGTGTGTATGTGTGTGTGTATGTGTATGTGTATGTGTGTGTGTGT NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATGTGTATGTGT ATGTGTATGTGTATGTGTATGTGTATGAGTATGTGTATGAGCATGTGCAT GTGTATTTGTATGTGCCAAGTCAAGCCAATGCCTTTATTTTGCTTCTAAG TGCTTGTTCGGCCACACGGCCGCTTTTCAACAAGGTCGAAGTGGAGGAGT CATGGATAAGACTATAAAGTCTACATGTGCTACATCAATACAGTCATAAA TACATTTATATGTATGTGTGTGTGTAGCCATTTTGAGCGGCACACCTCAA TGTTATGGACTCTTATCATCATTTTTGTTGCATGTTATGATGTGATCGTT TTTGTTGTTCTCTGACGACATTGCTCTTCTTGAAAACTCCATGCAATTTG CACAAGACCTTCTCAACGGAGTGGTAGCAGCATGCCAAAATATTGGTTTA AAAATTAAAATCATAAATTTAACACCCACAATTACCTACCATCTAGAGGG TTTATGACTTTGAATATGGGGGGGGGGGGGGCACGGATTCAAGGCACGAT ATGGGGGTTCGAATNNNNNNNNNNNNCGGATTCAAGGCACGATATGGGGG TTCGAATTAGCCAGGCTTGGAGTCCACTCTCTCCAAATGATATGGAAAGC CCACATCAGAAAAGAAAAAAAAAGAGTTAAAAGAAGAGTAGCTCGCCCGT ACATCACCGTAAAGAAACTGATTTAGACTGAGGCATGTTTACGTGAAAAG GACCTGATCGACACAATGTATGATCATGGGTACTGGAGGCTGCATGGTTT GCGCTCCAACTCTTTGATAGTGAAAGACATCACATTAATACATTTTTGTT ACATGCATAGGAGACAAAATTCTGCCAAACGTTGATTGGTCATAACCCTG GGCAATCAATCTGCCGCAGGCATCAGGGCAGATGCATGGCGGCTGCAGAC ATCTCCCTCCAGGATGTTCTGTTTTCGGCCAGAGTCCTAAAACAACCCTG GGCAGTCATCAACAAACTCTCAGCGCCAATACCTAAAACAACGACGAAAT CGAGCACATGTCATATTTTTAGACCTCCATCAGCAGAGGTTACTGTTTTG TACATGTCTGGCTTTTGTATGGCATATGATAAGATGACGTTATTGCAAGT TCATGCACAAAGGCTGATTACAGACAAACAAGTACATGGAGATACATGGC AATCGACATGGTTGGGTTTGACTTCTTTTTGATGACAGTAGAAAATAAAG TGACCCACGTTGAATCATAAGTGGGTTAGTAGATTTTAGTAGAAAGATGG ATTTTGTAAATTATTTAAATGGAGAAAGCTAGGAGAATTTATGGAATCTG TTTTCCATAATTCGTTTCTTTCCGCTACATATAGAGGACATTGGCAAATA AAATGTATTTCATTTTCCACTGCGTTCATTGTACAAAACTCTCACATTCA TAATAGCGTCACTCGCCTGAACCAGGATTGATTTCCCCCGTTCGTAGCTT CATCTTTTATTCATCGTGGTCCTTTACAGGAAAGCTAACGTCTTAATCGC TACTATAAATGGTTGCCCACAACAATTATGTTTATGCATGCACTCATGAT CGAATTGTAAGCGTGCTATGAGTGACTGCATGCGGTCTAGAATATCATCA CTTTTGCCCATAGGTCCCCTGGTGGCTTTCCATGATACTGCAGCAGGACT TCCAGTTTTGATATCTTGTGTTATGGACATGCTATGACCATAATTTTCAA AGGTAGATTGATCTTTGGTTCATGTAGAAGTGACGCAGGTTTGAAATCGC GGCCCGTCATCGAACAGCCCGTAGTCATAAAACGCATAGGCAGTAAAGGG ACTGGTTATTCCTGGCTGTATTTTCTGGCTAAAATATGGCAGAAACCACT CCTTTACACTTAATAAAAAATCTACCTGGAATGTTCACAAGTTAAAGGAA TAAGCAGTGCTGCAGCTGAGCGCAGACCTCCTCAAATGCATCATTTTGTA CTAATTAGTTGTTGATCGAACCCTTCTCACTGTCTGCAGCAGACTTTGCA GGATGCAGAACAACGCTGCGAATCGAAGGAATACCATAACGCCCAGCTCT TGATACACCGTTACAGAGTCTAGTTACTTCACCTGAATATCATCACGATT GAGTTGCACCAGACGACTAGTAAAAGGAATTTAACATTAACTTATTCTAA TGAGTTCTTGTTCTCTCAGCTTGTCTGGACCCGCTGGGTATGGAATCTGG TGTCATTCCTGACGAGAGCATCACGGCATCAACGACCTTTGGTTCTGGAC CCCAGCCCAAGGACGCTCGCTTAGATAAGGCTGACGGTTATGGCGCATGG GCAGCAACAACCAACATAGTAGGACAGTGGCTACAGGTAGACGTAAACTT GAAAATGTTAAATAATTGATTAGTTGGAAAGTAACCCTCTCCTCAAGTTC ATCGATGAAAACTCTTTTAAACATCATTACTGGGTCATGTTCTCTTTCGT GTGTCTGAGTGGCACTTAATATTTATCATCACCCGAGATGAACGTTGCAT GGGATGTCATTGCTTTGCTGCCGAATAAAAAAAGCATAATAGCTTCGATG AGTTATCCATATCATGAAAGCGTATTAAGACTTACTATCTTCATGCTCAT TTTCACTCGCATTTTGAAACGAAACGCCATTGTCTTCTAGGTGAATTTAG GGGAAATGAGGCGCGTCTCGGGCACCATTATTCAAGGTCGCTCCTACCCT AGCAAATCACATTGGGTAACCTCCTATAAACTTCAGTACAGTGAAGATGG AATAAGTTGGAGGACCTATGCAGACAGTGATGGCTCAGACAAGGTATCTA ATTTTCTTCAGAGTTCGTCGATTGAGCAAAACATTCACTCTTCATGAAGA ACCGCCAGAATTTATGGGCGTCTTGTGTTCTACACAAACTCAACCACGAA AACTTTAAGTGGCGGTAAGTCTTTTCCCGTCCCAAGGGAGATATCTATAA TCTAAGATTATCGGTTTACTGTCCAGGTCTTTGCTGGAAACGTCGACAAG AACACCCCTGTCACCAACCTGCTGGACGACCCCGTTGCGGCCCGTTATGT ACGCTTCGTTGCTCAGTCCTGGCATAACCACATCGCCATGAGAGTGGAGG TTCTAGGCTGCTACGGTGGGTTCATTGAAATATTCCGCCATGACTGGGCG CGTTTCTAATGCCTTTGGAGATCCCAGCTTTACATCGCTTGGAATCATTA TGTATACCAAACATGCAGTTAATCAGAAACTTAGCAAAGTATGATGCTAT CTTTATTTCTGTCGTCAGAGCTGTCACGTTTCGCCTCAAAAATGTTTTGA ACAAATGAACATTTACGTACTTCAACTAGTTTGAAATGAGTCCTACTATA TCATTCGAGTTCTGCAACGCATGATGTGAGAGACATTTGTTGGAGAACGT TCCTGATAAACTCGTTTCAACACGTTTCTAATTTGACTTCCACGCACGTA TGTTTTCAGGTCTCGTTGGTTTGTGGCCCCTAAACACCCTGTATGGTTCA TCAGACGTAACAGGAAACGGAAATGACGGGGTAGCAACAGGCACCCAGTT AGCCCCAGGTCCCCATGGAGACGTCGATGGCGCTTTTCTGTTTTCGGGGA CTACAACTTCCTACCTGGAAATCCCCAACAATGGCAGGTTGGACGTGGGC TTCTCCTTTACCATATTGGCCCACATCTTCCCCACTGGCGAGGCTGGGCC CATCTTTGACTACTTCGGAGACAATAATGCCTGGGGAGTCCATTTGTGGC AGGCACTTGCAACGACCCTGTACATGCGGTTCGTTTACAGACNCCCTGTA CATGCGGTACGTTTACAGACCAGAAACCTAATATTAACCCTTTAAAACCA AGTCTAACTACTTAATGTTGAAACCAATTGCATCATTTGAAGGAAACGGA CAATATTGCTGTACTTNGGAAACGGACAATATTGTTGTACTTCATTTCAT CCAGCACTACGAGAGCTACAAAGATACTGATATGCTGTCTTTTAACTCTT TCATGGCATGGAAGAACTATAATTTTTGTTATTGGGTCTCCTATGACATC ACTCTGTGACTCTATCCCCATTAATATCAAGGCATGAGGCTGGATGAGTC CCCATAAACTCAAATCCTTTTGAAGTTAGCTCCGGCAAAACCCTGTAAAA GAGAGACTTTAAACTGGGCTGTAAGAAAATTCTTTTAAAGTTAGATGCAA CAAAACGCTATAAAAGGCAGGCTCACTTTTAATTGGACGGTCAGAAAAAG AAGAGAACAGCAACATTTGTATATTTCAATTTATACACGCTGTTCCAACA CGCAACAAACAACAGTTTTTCATTTGTGCTGATTCTTCGGGAGTAATATT TGTAATCTGTCTGTTGTGTTGTATATAGCGCGGGGAACAGAGATGGATCC CACCCAACCCCGAGCCATGCAGCTGTGCTGCAGCAGAACACCTGGAATTA CGTGGGCGGAACCTACGACAGTTTTACAGGTGTGCAAGCCATTTGGAGCG ACGGTGAACCGGGCGGTGAACAACACATTGGAGTTGCCGAAGTCGCAACT CAGTACCCTATTCGGGTGGCAATGAGGGACGCAGACAGTCGGGTGTTCGC GGGTCGTATAGCCTGTCTGCAGCTGTACAACTACGCCATGACTAAAGAAC AGATTATTTCAGCGCGGGACATGTGCAGAGGTAAGTACAGTGTTATGGAA TAGACGACCATTTTGTAAGTATAAATAACTCAAATTATCGTTTAAGATCG GTAGGGGCCCTTTATTAATGGAATGTGTAATCACATCAAAAACATCCTAC AAACCTGTCCTACCACCAACAACGTGTACCTAGGTGGCTCTAGGCTAGTT GATGAATGCATGGTACATTTGATAAAATCCGATTCCCTCATTTTCCCCAT ATATAGCGTGTCCAATATCAGACTACGTTAATCCGTGTGACTCCCAG

Coding sequence (CDS) from alignment at Sc0000201:368544..374040-

>transcript:BL96785_cuf5 ID=transcript:BL96785_cuf5|Name=transcript:BL96785_cuf5|organism=Branchiostoma lanceolatum|type=CDS|length=8379bp|location=Sequence derived from alignment at Sc0000201:368544..374040- (Branchiostoma lanceolatum)
ATGCTCGCGACATTAGCGCGATACAACATTGTCTTCGCAACGTTGTGTGC
ACTCGCAATTCCAACATATGGAAGTGCTTGTCTGGACCCGCTGGGTATGG
AATCTGGTGTCATTCCTGACGAGAGCATCACGGCATCAACGACCTTTGGT
TCTGGACCCCAGCCCAAGGACGCTCGCTTAGATAAGGCTGACGGTTATGG
CGCATGGGCAGCAACAACCAACATAGTAGGACAGTGGCTACAGGTGAATT
TAGGGGAAATGAGGCGCGTCTCGGGCACCATTATTCAAGGTCGCTCCTAC
CCTAGCAAATCACATTGGGTAACCTCCTATAAACTTCAGTACAGTGAAGA
TGGAATAAGTTGGAGGACCTATGCAGACAGTGATGGCTCAGACAAGGTCT
TTGCTGGAAACGTCGACAAGAACACCCCTGTCACCAACCTGCTGGACGAC
CCCGTTGCGGCCCGTTATGTACGCTTCGTTGCTCAGTCCTGGCATAACCA
CATCGCCATGAGAGTGGAGGTTCTAGGCTGCTACGGTCTCGTTGGTTTGT
GGCCCCTAAACACCCTGTATGGTTCATCAGACGTAACAGGAAACGGAAAT
GACGGGGTAGCAACAGGCACCCAGTTAGCCCCAGGTCCCCATGGAGACGT
CGATGGCGCTTTTCTGTTTTCGGGGACTACAACTTCCTACCTGGAAATCC
CCAACAATGGCAGGTTGGACGTGGGCTTCTCCTTTACCATATTGGCCCAC
ATCTTCCCCACTGGCGAGGCTGGGCCCATCTTTGACTACTTCGGAGACAA
TAATGCCTGGGGAGTCCATTTGTGGCAGGCACTTGCAACGACCCTGTACA
TGCGCGCGGGGAACAGAGATGGATCCCACCCAACCCCGAGCCATGCAGCT
GTGCTGCAGCAGAACACCTGGAATTACGTGGGCGGAACCTACGACAGTTT
TACAGGTGTGCAAGCCATTTGGAGCGACGGTGAACCGGGCGGTGAACAAC
ACATTGGAGTTGCCGAAGTCGCAACTCAGTACCCTATTCGGGTGGCAATG
AGGGACGCAGACAGTCGGGTGTTCGCGGGTCGTATAGCCTGTCTGCAGCT
GTACAACTACGCCATGACTAAAGAACAGATTATTTCAGCGCGGGACATGT
GCAGAGCGTGTCCAATATCAGACTACGTTAATCCGTGTGACTCCCAGATG
CTCGCGACATTAGCGCGATACAACATTGTCTTCGCAACGTTGTGTGCACT
CGCAATTCCAACATATGGAAGTGCTTGTCTGGACCCGCTGGGTATGGAAT
CTGGTGTCATTCCTGACGAGAGCATCACGGCATCAACGACCTTTGGTTCT
GGACCCCAGCCCAAGGACGCTCGCTTAGATAAGGCTGACGGTTATGGCGC
ATGGGCAGCAACAACCAACATAGTAGGACAGTGGCTACAGGTGAATTTAG
GGGAAATGAGGCGCGTCTCGGGCACCATTATTCAAGGTCGCTCCTACCCT
AGCAAATCACATTGGGTAACCTCCTATAAACTTCAGTACAGTGAAGATGG
AATAAGTTGGAGGACCTATGCAGACAGTGATGGCTCAGACAAGGTCTTTG
CTGGAAACGTCGACAAGAACACCCCTGTCACCAACCTGCTGGACGACCCC
GTTGCGGCCCGTTATGTACGCTTCGTTGCTCAGTCCTGGCATAACCACAT
CGCCATGAGAGTGGAGGTTCTAGGCTGCTACGGTCTCGTTGGTTTGTGGC
CCCTAAACACCCTGTATGGTTCATCAGACGTAACAGGAAACGGAAATGAC
GGGGTAGCAACAGGCACCCAGTTAGCCCCAGGTCCCCATGGAGACGTCGA
TGGCGCTTTTCTGTTTTCGGGGACTACAACTTCCTACCTGGAAATCCCCA
ACAATGGCAGGTTGGACGTGGGCTTCTCCTTTACCATATTGGCCCACATC
TTCCCCACTGGCGAGGCTGGGCCCATCTTTGACTACTTCGGAGACAATAA
TGCCTGGGGAGTCCATTTGTGGCAGGCACTTGCAACGACCCTGTACATGC
GCGCGGGGAACAGAGATGGATCCCACCCAACCCCGAGCCATGCAGCTGTG
CTGCAGCAGAACACCTGGAATTACGTGGGCGGAACCTACGACAGTTTTAC
AGGTGTGCAAGCCATTTGGAGCGACGGTGAACCGGGCGGTGAACAACACA
TTGGAGTTGCCGAAGTCGCAACTCAGTACCCTATTCGGGTGGCAATGAGG
GACGCAGACAGTCGGGTGTTCGCGGGTCGTATAGCCTGTCTGCAGCTGTA
CAACTACGCCATGACTAAAGAACAGATTATTTCAGCGCGGGACATGTGCA
GAGCGTGTCCAATATCAGACTACGTTAATCCGTGTGACTCCCAGATGCTC
GCGACATTAGCGCGATACAACATTGTCTTCGCAACGTTGTGTGCACTCGC
AATTCCAACATATGGAAGTGCTTGTCTGGACCCGCTGGGTATGGAATCTG
GTGTCATTCCTGACGAGAGCATCACGGCATCAACGACCTTTGGTTCTGGA
CCCCAGCCCAAGGACGCTCGCTTAGATAAGGCTGACGGTTATGGCGCATG
GGCAGCAACAACCAACATAGTAGGACAGTGGCTACAGGTGAATTTAGGGG
AAATGAGGCGCGTCTCGGGCACCATTATTCAAGGTCGCTCCTACCCTAGC
AAATCACATTGGGTAACCTCCTATAAACTTCAGTACAGTGAAGATGGAAT
AAGTTGGAGGACCTATGCAGACAGTGATGGCTCAGACAAGGTCTTTGCTG
GAAACGTCGACAAGAACACCCCTGTCACCAACCTGCTGGACGACCCCGTT
GCGGCCCGTTATGTACGCTTCGTTGCTCAGTCCTGGCATAACCACATCGC
CATGAGAGTGGAGGTTCTAGGCTGCTACGGTCTCGTTGGTTTGTGGCCCC
TAAACACCCTGTATGGTTCATCAGACGTAACAGGAAACGGAAATGACGGG
GTAGCAACAGGCACCCAGTTAGCCCCAGGTCCCCATGGAGACGTCGATGG
CGCTTTTCTGTTTTCGGGGACTACAACTTCCTACCTGGAAATCCCCAACA
ATGGCAGGTTGGACGTGGGCTTCTCCTTTACCATATTGGCCCACATCTTC
CCCACTGGCGAGGCTGGGCCCATCTTTGACTACTTCGGAGACAATAATGC
CTGGGGAGTCCATTTGTGGCAGGCACTTGCAACGACCCTGTACATGCGCG
CGGGGAACAGAGATGGATCCCACCCAACCCCGAGCCATGCAGCTGTGCTG
CAGCAGAACACCTGGAATTACGTGGGCGGAACCTACGACAGTTTTACAGG
TGTGCAAGCCATTTGGAGCGACGGTGAACCGGGCGGTGAACAACACATTG
GAGTTGCCGAAGTCGCAACTCAGTACCCTATTCGGGTGGCAATGAGGGAC
GCAGACAGTCGGGTGTTCGCGGGTCGTATAGCCTGTCTGCAGCTGTACAA
CTACGCCATGACTAAAGAACAGATTATTTCAGCGCGGGACATGTGCAGAG
CGTGTCCAATATCAGACTACGTTAATCCGTGTGACTCCCAGATGCTCGCG
ACATTAGCGCGATACAACATTGTCTTCGCAACGTTGTGTGCACTCGCAAT
TCCAACATATGGAAGTGCTTGTCTGGACCCGCTGGGTATGGAATCTGGTG
TCATTCCTGACGAGAGCATCACGGCATCAACGACCTTTGGTTCTGGACCC
CAGCCCAAGGACGCTCGCTTAGATAAGGCTGACGGTTATGGCGCATGGGC
AGCAACAACCAACATAGTAGGACAGTGGCTACAGGTGAATTTAGGGGAAA
TGAGGCGCGTCTCGGGCACCATTATTCAAGGTCGCTCCTACCCTAGCAAA
TCACATTGGGTAACCTCCTATAAACTTCAGTACAGTGAAGATGGAATAAG
TTGGAGGACCTATGCAGACAGTGATGGCTCAGACAAGGTCTTTGCTGGAA
ACGTCGACAAGAACACCCCTGTCACCAACCTGCTGGACGACCCCGTTGCG
GCCCGTTATGTACGCTTCGTTGCTCAGTCCTGGCATAACCACATCGCCAT
GAGAGTGGAGGTTCTAGGCTGCTACGGTCTCGTTGGTTTGTGGCCCCTAA
ACACCCTGTATGGTTCATCAGACGTAACAGGAAACGGAAATGACGGGGTA
GCAACAGGCACCCAGTTAGCCCCAGGTCCCCATGGAGACGTCGATGGCGC
TTTTCTGTTTTCGGGGACTACAACTTCCTACCTGGAAATCCCCAACAATG
GCAGGTTGGACGTGGGCTTCTCCTTTACCATATTGGCCCACATCTTCCCC
ACTGGCGAGGCTGGGCCCATCTTTGACTACTTCGGAGACAATAATGCCTG
GGGAGTCCATTTGTGGCAGGCACTTGCAACGACCCTGTACATGCGCGCGG
GGAACAGAGATGGATCCCACCCAACCCCGAGCCATGCAGCTGTGCTGCAG
CAGAACACCTGGAATTACGTGGGCGGAACCTACGACAGTTTTACAGGTGT
GCAAGCCATTTGGAGCGACGGTGAACCGGGCGGTGAACAACACATTGGAG
TTGCCGAAGTCGCAACTCAGTACCCTATTCGGGTGGCAATGAGGGACGCA
GACAGTCGGGTGTTCGCGGGTCGTATAGCCTGTCTGCAGCTGTACAACTA
CGCCATGACTAAAGAACAGATTATTTCAGCGCGGGACATGTGCAGAGCGT
GTCCAATATCAGACTACGTTAATCCGTGTGACTCCCAGATGCTCGCGACA
TTAGCGCGATACAACATTGTCTTCGCAACGTTGTGTGCACTCGCAATTCC
AACATATGGAAGTGCTTGTCTGGACCCGCTGGGTATGGAATCTGGTGTCA
TTCCTGACGAGAGCATCACGGCATCAACGACCTTTGGTTCTGGACCCCAG
CCCAAGGACGCTCGCTTAGATAAGGCTGACGGTTATGGCGCATGGGCAGC
AACAACCAACATAGTAGGACAGTGGCTACAGGTGAATTTAGGGGAAATGA
GGCGCGTCTCGGGCACCATTATTCAAGGTCGCTCCTACCCTAGCAAATCA
CATTGGGTAACCTCCTATAAACTTCAGTACAGTGAAGATGGAATAAGTTG
GAGGACCTATGCAGACAGTGATGGCTCAGACAAGGTCTTTGCTGGAAACG
TCGACAAGAACACCCCTGTCACCAACCTGCTGGACGACCCCGTTGCGGCC
CGTTATGTACGCTTCGTTGCTCAGTCCTGGCATAACCACATCGCCATGAG
AGTGGAGGTTCTAGGCTGCTACGGTCTCGTTGGTTTGTGGCCCCTAAACA
CCCTGTATGGTTCATCAGACGTAACAGGAAACGGAAATGACGGGGTAGCA
ACAGGCACCCAGTTAGCCCCAGGTCCCCATGGAGACGTCGATGGCGCTTT
TCTGTTTTCGGGGACTACAACTTCCTACCTGGAAATCCCCAACAATGGCA
GGTTGGACGTGGGCTTCTCCTTTACCATATTGGCCCACATCTTCCCCACT
GGCGAGGCTGGGCCCATCTTTGACTACTTCGGAGACAATAATGCCTGGGG
AGTCCATTTGTGGCAGGCACTTGCAACGACCCTGTACATGCGCGCGGGGA
ACAGAGATGGATCCCACCCAACCCCGAGCCATGCAGCTGTGCTGCAGCAG
AACACCTGGAATTACGTGGGCGGAACCTACGACAGTTTTACAGGTGTGCA
AGCCATTTGGAGCGACGGTGAACCGGGCGGTGAACAACACATTGGAGTTG
CCGAAGTCGCAACTCAGTACCCTATTCGGGTGGCAATGAGGGACGCAGAC
AGTCGGGTGTTCGCGGGTCGTATAGCCTGTCTGCAGCTGTACAACTACGC
CATGACTAAAGAACAGATTATTTCAGCGCGGGACATGTGCAGAGCGTGTC
CAATATCAGACTACGTTAATCCGTGTGACTCCCAGATGCTCGCGACATTA
GCGCGATACAACATTGTCTTCGCAACGTTGTGTGCACTCGCAATTCCAAC
ATATGGAAGTGCTTGTCTGGACCCGCTGGGTATGGAATCTGGTGTCATTC
CTGACGAGAGCATCACGGCATCAACGACCTTTGGTTCTGGACCCCAGCCC
AAGGACGCTCGCTTAGATAAGGCTGACGGTTATGGCGCATGGGCAGCAAC
AACCAACATAGTAGGACAGTGGCTACAGGTGAATTTAGGGGAAATGAGGC
GCGTCTCGGGCACCATTATTCAAGGTCGCTCCTACCCTAGCAAATCACAT
TGGGTAACCTCCTATAAACTTCAGTACAGTGAAGATGGAATAAGTTGGAG
GACCTATGCAGACAGTGATGGCTCAGACAAGGTCTTTGCTGGAAACGTCG
ACAAGAACACCCCTGTCACCAACCTGCTGGACGACCCCGTTGCGGCCCGT
TATGTACGCTTCGTTGCTCAGTCCTGGCATAACCACATCGCCATGAGAGT
GGAGGTTCTAGGCTGCTACGGTCTCGTTGGTTTGTGGCCCCTAAACACCC
TGTATGGTTCATCAGACGTAACAGGAAACGGAAATGACGGGGTAGCAACA
GGCACCCAGTTAGCCCCAGGTCCCCATGGAGACGTCGATGGCGCTTTTCT
GTTTTCGGGGACTACAACTTCCTACCTGGAAATCCCCAACAATGGCAGGT
TGGACGTGGGCTTCTCCTTTACCATATTGGCCCACATCTTCCCCACTGGC
GAGGCTGGGCCCATCTTTGACTACTTCGGAGACAATAATGCCTGGGGAGT
CCATTTGTGGCAGGCACTTGCAACGACCCTGTACATGCGCGCGGGGAACA
GAGATGGATCCCACCCAACCCCGAGCCATGCAGCTGTGCTGCAGCAGAAC
ACCTGGAATTACGTGGGCGGAACCTACGACAGTTTTACAGGTGTGCAAGC
CATTTGGAGCGACGGTGAACCGGGCGGTGAACAACACATTGGAGTTGCCG
AAGTCGCAACTCAGTACCCTATTCGGGTGGCAATGAGGGACGCAGACAGT
CGGGTGTTCGCGGGTCGTATAGCCTGTCTGCAGCTGTACAACTACGCCAT
GACTAAAGAACAGATTATTTCAGCGCGGGACATGTGCAGAGCGTGTCCAA
TATCAGACTACGTTAATCCGTGTGACTCCCAGATGCTCGCGACATTAGCG
CGATACAACATTGTCTTCGCAACGTTGTGTGCACTCGCAATTCCAACATA
TGGAAGTGCTTGTCTGGACCCGCTGGGTATGGAATCTGGTGTCATTCCTG
ACGAGAGCATCACGGCATCAACGACCTTTGGTTCTGGACCCCAGCCCAAG
GACGCTCGCTTAGATAAGGCTGACGGTTATGGCGCATGGGCAGCAACAAC
CAACATAGTAGGACAGTGGCTACAGGTGAATTTAGGGGAAATGAGGCGCG
TCTCGGGCACCATTATTCAAGGTCGCTCCTACCCTAGCAAATCACATTGG
GTAACCTCCTATAAACTTCAGTACAGTGAAGATGGAATAAGTTGGAGGAC
CTATGCAGACAGTGATGGCTCAGACAAGGTCTTTGCTGGAAACGTCGACA
AGAACACCCCTGTCACCAACCTGCTGGACGACCCCGTTGCGGCCCGTTAT
GTACGCTTCGTTGCTCAGTCCTGGCATAACCACATCGCCATGAGAGTGGA
GGTTCTAGGCTGCTACGGTCTCGTTGGTTTGTGGCCCCTAAACACCCTGT
ATGGTTCATCAGACGTAACAGGAAACGGAAATGACGGGGTAGCAACAGGC
ACCCAGTTAGCCCCAGGTCCCCATGGAGACGTCGATGGCGCTTTTCTGTT
TTCGGGGACTACAACTTCCTACCTGGAAATCCCCAACAATGGCAGGTTGG
ACGTGGGCTTCTCCTTTACCATATTGGCCCACATCTTCCCCACTGGCGAG
GCTGGGCCCATCTTTGACTACTTCGGAGACAATAATGCCTGGGGAGTCCA
TTTGTGGCAGGCACTTGCAACGACCCTGTACATGCGCGCGGGGAACAGAG
ATGGATCCCACCCAACCCCGAGCCATGCAGCTGTGCTGCAGCAGAACACC
TGGAATTACGTGGGCGGAACCTACGACAGTTTTACAGGTGTGCAAGCCAT
TTGGAGCGACGGTGAACCGGGCGGTGAACAACACATTGGAGTTGCCGAAG
TCGCAACTCAGTACCCTATTCGGGTGGCAATGAGGGACGCAGACAGTCGG
GTGTTCGCGGGTCGTATAGCCTGTCTGCAGCTGTACAACTACGCCATGAC
TAAAGAACAGATTATTTCAGCGCGGGACATGTGCAGAGCGTGTCCAATAT
CAGACTACGTTAATCCGTGTGACTCCCAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
gene:BL96785gene:BL96785Branchiostoma lanceolatumgene
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
transcript:BL96785_cuf5transcript:BL96785_cuf5-proteinBranchiostoma lanceolatumpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
BL96785_cuf5-E1BL96785_cuf5-E1-1564476830-384503Branchiostoma lanceolatumexon
BL96785_cuf5-E2BL96785_cuf5-E2-1564476830-384500Branchiostoma lanceolatumexon
BL96785_cuf5-E3BL96785_cuf5-E3-1564476830-384498Branchiostoma lanceolatumexon
BL96785_cuf5-E4BL96785_cuf5-E4-1564476830-384496Branchiostoma lanceolatumexon
BL96785_cuf5-E5BL96785_cuf5-E5-1564476830-384494Branchiostoma lanceolatumexon
BL96785_cuf5-E6BL96785_cuf5-E6-1564476830-384492Branchiostoma lanceolatumexon
BL96785_cuf5-E7BL96785_cuf5-E7-1564476830-384490Branchiostoma lanceolatumexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000201genomeSc0000201:368544..374040 -
Properties
Property NameValue
Transcript idBL96785_cuf5
Biotypeprotein_coding