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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL96770_cuf7 >transcript:BL96770_cuf7-protein ID=transcript:BL96770_cuf7-protein|Name=transcript:BL96770_cuf7|organism=Branchiostoma lanceolatum|type=polypeptide|length=137bp
AVMSDKVHPVCLANSGDEESFPAGTRCIVSGWGLLRSTHQNTPDLLQQAE
LPLLDTQTCENYWTGYITDRMICAGAEGESSSCMGDSGGPLVCQKDGAWN
LVGVVSWGSSRCTTSYPGVYARVTNLRQWIDNTMSRN Run BLAST on NCBI mRNA from alignment at Sc0000213:327134..330289+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL96770_cuf7 ID=transcript:BL96770_cuf7|Name=transcript:BL96770_cuf7|organism=Branchiostoma lanceolatum|type=mRNA|length=3156bp|location=Sequence derived from alignment at Sc0000213:327134..330289+ (Branchiostoma lanceolatum)
CCGCCGTGATGAGTGACAAGGTCCACCCCGTCTGTCTGGCAAACTCCGGG
GACGAGGAGTCCTTCCCGGCCGGGACGCGCTGCATCGTCTCCGGTTGGGG
ATTGCTGCGTTCCACCCGTGAGTTGATTCGGTGGCAGAGGACAGTATCCA
TAATCTCCAAGCAGATCCATCGGTGGCAAGGCAGTAGCAAAAGGGCCAAC
CTGTACCAGATGATCTCCGGTGGCTTTTAGTACACGTTAGCCCCTTTGAC
ACTGCCTTGTCACCGTTAGATCTGCTTGCAGATTAAGTATCCATTGGCCA
GACAGTGGCCAACGGTTATTGGTAAACATCGATTGACATCGACGCAGCAT
CAACAAGAGTTCGGAGACCTCATATCTCCATAGAATATTCTACATGTTCT
TGGGGGTGCGATAGAATATTCTGATCATGCAAATGTCTCTTACATTTACA
TAATATATGCTTAGTTATGTACACATTTAACTAACTTACACAGGTCACGA
TATTGACAGTCCAATCATTTACCGCTTAGATGAATTATGGCACTTTTGCA
TGAATTATTCAAATTAGGAATGTATTTGCATCATTGGTATCAATTAAGTT
CCACCTGCCATAAACTACATATGTTTTATGTATTTGAGTTCTATTGTAAA
AAAACAACCCACCAGAATTATGGAATTGCCTAATTAATCATGCAAACTAA
GTCCCAATTTGCATATTTTGCATCTCATTGAGTACATCTCTGTGTACTTG
AATACCGAATATCAGAGAAATCCATTTTTTATTGAAAAAAATCAAAATCT
TAATTTGTTTACCCTCGCCTCTTCTCTGATTGGTAGATCAAAACACCCCT
GACCTACTGCAGCAGGCCGAACTCCCATTGCTGGACACCCAGACTTGTGA
GAACTACTGGACCGGCTACATCACTGACCGCATGATCTGCGCAGGCGCAG
AAGGAGAGTCTTCTTCTTGCATGGTGAGCACAAATATTTTATTTGTGATC
CAGCTTACATAAAGGCATCTCTATCGCTGTACATGAACGCTCATTAAGTT
GTTTGGGGTCAAAGCAACAATTTTAATGATTACCTGTCACTGTTGCTCAC
GGTGTAGTTTAGTTACCTCCACGAAATGGGAGGTACCGTTATAGTTTTGA
GCGTATTTGCAATTGTCTGTACTGTTTGTGCGCACTCGGATGGAATACGG
TGACATTTAGTATGTTGGTAAGTGTTATAGACGCAAAGGTAAATGTCAAT
TTGGGGCCTCCTGATGGTCGACCTTGAACGTCCGGTTTTTGTATCTTCGC
TGTTGTATACCTTTGACTGTTAACGTTAAAGGTTCTTTTTCTTTTGTCTT
ACTAGAATTCCATGATAATGATAACCCCCACGTGTCCTTCAGTTTATAGA
TTTACTAAGAATCTTACATTTCCCCCAGGGTGACTCCGGCGGCCCGCTGG
TGTGTCAGAAGGACGGCGCCAGGAACCTGGTGGGAGTTGTGTCCTGGGGA
AGCTCCCAGTGTACCACACGGCATCGTGCTTGTCCCTAGGCCCTGTCTCA
ACCGGTTTCTAACGTTTTCTTAATTTTGTGTGCCCCTAGGGTGACTCCGG
TGGCCCGCTTGTGTGTCAGAAGGATGGCGCCTGGAACCTGGTGGGAGTTG
TGTCCTGGGGAAGCTCGCGATGCACTACCTCCTACCCGGGAGTGTACGCA
CGCGTCACCAACCTCCGCCAGTGGATCGACAACACCATGTCCCGCAACTA
AAGCTCCCCTCCCCCCGGCCTTTTCTAGCTGTCAGTACCTTACATTGGTA
AAGGCCGATGCAAGTCTGCTTTAGACAGAGTTGAATGGGTTTGGGAAGGA
TTTATCGGACATTGGTCACAATAAAAATTATTTGACTGAAGAGAGATTGG
TAGTATTTTAATTTGTGTCTATGTGTCTATGTACATGTGTTTAATCAAAA
CTGCCCAGGAAGTCCACTCAGAGGATTGATAAAATCTGGTCTATGTGGAC
AGGTGGTCACTCAATATAGACAGGATTTTTGATGCTTGTGGCAAGGGGAA
AACTATCTGCGGGACTACCAAAAAGTGGTCACATTGGCCAGGTGGTCCTA
ATGTAGGATGGTCACTTGTACAGGTTTGACTGTATATCACACACCCCATT
AGATGCGCATGGCACAAAACCATCGAATTAGGAATTATATTTCACTCTAG
CAGAAGGATGTAGGTGAAATATTTTCATTTGCTCACAAGTGCTGCATTTC
TAATGCGACATTATATCTAATGTTTTTGGTTATCCTTGCGAATCAGTCGA
AAAGATATAACTCTTCCCGAACTCCCCGATACATTCCACCTTTACATAAG
TCGAAAGAGACCGAAACTTTGAGGTATAAACTAACCCAATAAATACAATA
CAATACAATAAACAATTTATCTTGGGCAGAAGTAATATTTCCAAACGAGT
ACATGACCTCTTTGTTAAAACATGCTTTCAGGAAAAAATTGTATACATTA
TCGTCAATTAAGGCGTCACATGATTTTCGCAAGGGGGGAGGGGGCGCAGA
CATTGTAAGTTCGCCGTGTGAAATAAAAATCCTGAGTGAAACGAGTCTAC
AAAGCCTAGTTCAAAACAGTACAGAGTTTCTATATCAACGATGGAAGTAA
AACGTCACATTGTTGCTCTCTCATTCAAGGCTATAGTAACCTAAACGGCT
TATTCTCACAACAGACAACAAACAAAGAAAAGTAACGCCTTTCTCTAATT
TAATCATAAATCAAACAATGATCAAACAAGAATGGACAAATTGGCTGTAG
TCAGACGATGGTAAAGTCCAGTCAATACGCATCATTTTCCGCTTGTTGGG
CATTTTGAATGGACACACATACTCATCAGCGGTTTGCTACTGAGTGACGC
GTCACCCACAATTGTGTACACGTCATAAATCATGATTTATCGATTCACCC
TTCGGGTTTGAGTCCTTAACTTCGTAGCTTTGTTAGAGAGAAAACAAATA
CAGTATCACGCCACATCTGGGGAGACAATAGGACGGTGATAGCTTGTTGA
TTTTGCTATTGTTCGCGCTAATAACAGTACCGATCGCTGTAAGGCATAAG
TTTGAGCAGCTGGTTCGAAAACAAATTGGAAGACATAGGGGTCAGGGACG
GGTTTT Coding sequence (CDS) from alignment at Sc0000213:327134..330289+ >transcript:BL96770_cuf7 ID=transcript:BL96770_cuf7|Name=transcript:BL96770_cuf7|organism=Branchiostoma lanceolatum|type=CDS|length=1242bp|location=Sequence derived from alignment at Sc0000213:327134..330289+ (Branchiostoma lanceolatum)
GCCGTGATGAGTGACAAGGTCCACCCCGTCTGTCTGGCAAACTCCGGGGA
CGAGGAGTCCTTCCCGGCCGGGACGCGCTGCATCGTCTCCGGTTGGGGAT
TGCTGCGTTCCACCCATCAAAACACCCCTGACCTACTGCAGCAGGCCGAA
CTCCCATTGCTGGACACCCAGACTTGTGAGAACTACTGGACCGGCTACAT
CACTGACCGCATGATCTGCGCAGGCGCAGAAGGAGAGTCTTCTTCTTGCA
TGGGTGACTCCGGTGGCCCGCTTGTGTGTCAGAAGGATGGCGCCTGGAAC
CTGGTGGGAGTTGTGTCCTGGGGAAGCTCGCGATGCACTACCTCCTACCC
GGGAGTGTACGCACGCGTCACCAACCTCCGCCAGTGGATCGACAACACCA
TGTCCCGCAACTAAGCCGTGATGAGTGACAAGGTCCACCCCGTCTGTCTG
GCAAACTCCGGGGACGAGGAGTCCTTCCCGGCCGGGACGCGCTGCATCGT
CTCCGGTTGGGGATTGCTGCGTTCCACCCATCAAAACACCCCTGACCTAC
TGCAGCAGGCCGAACTCCCATTGCTGGACACCCAGACTTGTGAGAACTAC
TGGACCGGCTACATCACTGACCGCATGATCTGCGCAGGCGCAGAAGGAGA
GTCTTCTTCTTGCATGGGTGACTCCGGTGGCCCGCTTGTGTGTCAGAAGG
ATGGCGCCTGGAACCTGGTGGGAGTTGTGTCCTGGGGAAGCTCGCGATGC
ACTACCTCCTACCCGGGAGTGTACGCACGCGTCACCAACCTCCGCCAGTG
GATCGACAACACCATGTCCCGCAACTAAGCCGTGATGAGTGACAAGGTCC
ACCCCGTCTGTCTGGCAAACTCCGGGGACGAGGAGTCCTTCCCGGCCGGG
ACGCGCTGCATCGTCTCCGGTTGGGGATTGCTGCGTTCCACCCATCAAAA
CACCCCTGACCTACTGCAGCAGGCCGAACTCCCATTGCTGGACACCCAGA
CTTGTGAGAACTACTGGACCGGCTACATCACTGACCGCATGATCTGCGCA
GGCGCAGAAGGAGAGTCTTCTTCTTGCATGGGTGACTCCGGTGGCCCGCT
TGTGTGTCAGAAGGATGGCGCCTGGAACCTGGTGGGAGTTGTGTCCTGGG
GAAGCTCGCGATGCACTACCTCCTACCCGGGAGTGTACGCACGCGTCACC
AACCTCCGCCAGTGGATCGACAACACCATGTCCCGCAACTAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000213 | genome | Sc0000213:327134..330289 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL96770_cuf7 |
| Biotype | protein_coding |
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