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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL96761_cuf0 >transcript:BL96761_cuf0-protein ID=transcript:BL96761_cuf0-protein|Name=transcript:BL96761_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=514bp
VSYCGIETLPDSIGQASSLKEIHLAGNKLRTLPDSFGRLLNLETLDLEGN RRLSALPYALHRLQKLKDKKIGTKQGLVLNDTPTLTLPDHKIVREGVVSV RTELLTEGCINGIVATIEAEVIDNTIIESLSEDIVTIVNGGLADDLILHM TNVAIAEERCVGDIFTSIFEDVSLPLVKEISNKTVDEENAILDAKACPVM EELMEEIIQATTKAIVLEQEEEWRLGQTVPGEYDKLFSYDISTVTSTVQS LDLPAGCNLSIPPGATDVDTSVISLVLNPHGYDGTLHLEDTELLVSDIIE MRPSGMTFSEPVKLKIPHSLPKYDCEREYIVMTSEDDGRTWVALGTVSEQ EKGQRFVTVEVTHFSSFAVIARPLEHCHRVRQGKASTLTSSEQTGIEVIL PEDCISEEEEISFTVTPVDRDTLACAGMEDSIENMSHIVNFFKGSNLLLN RPATIMLPLSSGEDDSQVRVLSCNENGDWEDVTSKVEDVVLQGSKVAFKT DRLSSGFVVLHCND Run BLAST on NCBI mRNA from alignment at Sc0000167:151272..153703+ Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL96761_cuf0 ID=transcript:BL96761_cuf0|Name=transcript:BL96761_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=2432bp|location=Sequence derived from alignment at Sc0000167:151272..153703+ (Branchiostoma lanceolatum) GTCAGCTACTGTGGAATTGAGACTCTTCCTGACTCTATTGGACAGGCGTC
CTCATTGAAGGAAATCCACCTTGCCGGCAACAAACTGCGTACTCTTCCTG
ACAGCTTCGGGCGCCTACTCAATCTGGAAACTCTTGATTTGGAGGGAAAC
CGCCGACTGTCCGCTTTGCCATATGCGCTTCACCGCCTGCAGAAGCTGAA
AGACAAAAAGATCGGGACAAAACAGGGCCTTGTCCTGAACGACACACCGA
CACTGACACTTCCAGACCACAAGATTGTCCGAGAGGGCGTAGTCTCCGTG
CGCACTGAGCTGCTAACAGAGGGCTGCATCAACGGTATCGTAGCCACCAT
TGAGGCGGAGGTTATTGACAACACCATCATCGAAAGTCTGTCCGAAGACA
TTGTCACGATCGTTAATGGTGGTTTGGCTGATGACCTGATACTGCACATG
ACAAACGTTGCAATCGCAGAAGAAAGGTGCGTTGGCGACATTTTCACGTC
CATCTTTGAAGACGTCAGCTTGCCGCTTGTGAAGGAGATCAGCAACAAAA
CCGTGGACGAAGAAAATGCTATCTTAGATGCAAAGGCATGTCCGGTGATG
GAAGAGCTTATGGAGGAAATCATCCAGGCAACAACAAAGGCAATCGTCTT
GGAACAGGAGGAAGAATGGCGCCTGGGCCAGACCGTTCCGGGCGAATACG
ACAAGCTGTTCAGGTAAATTTTAAAAAACAAAGCCCCTTCTGATGAAAAT
TCTCGAGTCTATTTGCAGATAACTGAAACTAAGAGCACTTATCAGTTGTA
CAAATATGTAATTTGAAGTGAGTACATGGCCGAGAAGCTTACTCATTCAT
TCACCTTCCACAGCTATGACATATCAACAGTCACAAGCACCGTGCAGTCC
CTGGACCTTCCAGCCGGATGCAACTTGAGCATCCCTCCCGGAGCTACAGA
TGTAGATACATCTGTAATATCACTAGTACTGAACCCACACGGGTACGACG
GAACACTCCACCTGGAAGACACGGAGCTACTTGTCAGTGACATCATCGAG
ATGAGACCATCGGGAATGACGTTCTCCGAGCCCGTGAAGCTTAAGATTCC
ACATTCTTTACCCAAGTATGACTGCGAAAGGGAGTACATTGTGATGACGT
CAGAGGATGACGGGCGGACGTGGGTGGCTCTGGGAACAGTTAGCGAACAA
GAGAAAGTAAGTGTTGGACTGCTACTCTACTACATTATCAGTGTAGGGAG
AAACCCTATTTATATTTACAGGATCACGTGTTGGTTTAGGTATTGTTAAC
ACAATTTTTGCGATACGTACACTGTAATGTTAACCTCCTGGAGTGCGTTA
TGAGTTACAATTCAATTTCAATTGCTGATTTGCTCTCTCTCTAGGGGCAG
CGGTTTGTTACGGTAGAGGTAACGCATTTCTCTTCGTTCGCTGTCATTGC
GAGGCCATTGGAGCACTGCCACAGAGTGAGACAAGGTAAAGCGTCGACCC
TGACATCCTCAGAGCAGACAGGGATTGAGGTCATCCTCCCGGAGGACTGT
ATTTCTGAAGAGGAAGAGATCTCGTTTACTGTAAGTAGCTGTATCCGTGT
TTTTGTGGGGGTATAGACTGAGTGTAATTTGTGTACAAAGTACTAACTAC
AAAGTGGTGAATACCTTACTGTTTCTCACTCTGTCTTGGAATTAAGCAAA
CTTAAGTCTGGTATCGTCGCACAGTAATTATTGGACCGATCTGTACTGCG
AAATCAGTCAGTTTTTAAATTCAAATTTTCGATTTATGTTAATTGCAGGA
TTGCTTAGATAATTGTCTATGGTACTTTATGCAGAATAAATGTTTTTGTT
CAGTGATGAGTCTTTTACTTTTTTTGTCCAACAAATTAAAGGTCACACCA
GTCGACAGAGACACACTTGCGTGTGCTGGGATGGAGGATTCAATAGAAAA
CATGAGTCACATTGTCAACTTCTTCAAAGGCAGCAACCTACTTCTCAACC
GCCCCGCCACCATTATGCTACCGCTGTCGTCTGGAGAAGACGACAGCCAA
GTCCGCGTCCTCAGTTGCAATGAGAACGGGGACTGGGAAGATGTCACCAG
TAAAGTGGAGGATGTCGTCCTACAGGGGTCAAAGGTTGCTTTTAAGACAG
ACCGGCTCAGTTCTGGGTAAGTAGACACTGTTGAGTCTTGAAAAAAGCCA
TATATAAATTGAAAAGTAAACGGTAGTGGTTAGTCACAGTCTTTTGTTGA
TGTTGAGTAACACATGGGCTTACGATGACGTCGTTAAGTTTTAGAAAGTA
GCGCCACCAGTGACCATATAGACAATAAACTTAAAATAAGCTAATTAAAG
GAATATAATAAGTGACGTAATGGTTCATTCCCTGCCTGACTATCTTTGCA
CTCCAGTTTTGTTGTGCTTCACTGCAATGACG Coding sequence (CDS) from alignment at Sc0000167:151272..153703+ >transcript:BL96761_cuf0 ID=transcript:BL96761_cuf0|Name=transcript:BL96761_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=7710bp|location=Sequence derived from alignment at Sc0000167:151272..153703+ (Branchiostoma lanceolatum) GTCAGCTACTGTGGAATTGAGACTCTTCCTGACTCTATTGGACAGGCGTC CTCATTGAAGGAAATCCACCTTGCCGGCAACAAACTGCGTACTCTTCCTG ACAGCTTCGGGCGCCTACTCAATCTGGAAACTCTTGATTTGGAGGGAAAC CGCCGACTGTCCGCTTTGCCATATGCGCTTCACCGCCTGCAGAAGCTGAA AGACAAAAAGATCGGGACAAAACAGGGCCTTGTCCTGAACGACACACCGA CACTGACACTTCCAGACCACAAGATTGTCCGAGAGGGCGTAGTCTCCGTG CGCACTGAGCTGCTAACAGAGGGCTGCATCAACGGTATCGTAGCCACCAT TGAGGCGGAGGTTATTGACAACACCATCATCGAAAGTCTGTCCGAAGACA TTGTCACGATCGTTAATGGTGGTTTGGCTGATGACCTGATACTGCACATG ACAAACGTTGCAATCGCAGAAGAAAGGTGCGTTGGCGACATTTTCACGTC CATCTTTGAAGACGTCAGCTTGCCGCTTGTGAAGGAGATCAGCAACAAAA CCGTGGACGAAGAAAATGCTATCTTAGATGCAAAGGCATGTCCGGTGATG GAAGAGCTTATGGAGGAAATCATCCAGGCAACAACAAAGGCAATCGTCTT GGAACAGGAGGAAGAATGGCGCCTGGGCCAGACCGTTCCGGGCGAATACG ACAAGCTGTTCAGCTATGACATATCAACAGTCACAAGCACCGTGCAGTCC CTGGACCTTCCAGCCGGATGCAACTTGAGCATCCCTCCCGGAGCTACAGA TGTAGATACATCTGTAATATCACTAGTACTGAACCCACACGGGTACGACG GAACACTCCACCTGGAAGACACGGAGCTACTTGTCAGTGACATCATCGAG ATGAGACCATCGGGAATGACGTTCTCCGAGCCCGTGAAGCTTAAGATTCC ACATTCTTTACCCAAGTATGACTGCGAAAGGGAGTACATTGTGATGACGT CAGAGGATGACGGGCGGACGTGGGTGGCTCTGGGAACAGTTAGCGAACAA GAGAAAGGGCAGCGGTTTGTTACGGTAGAGGTAACGCATTTCTCTTCGTT CGCTGTCATTGCGAGGCCATTGGAGCACTGCCACAGAGTGAGACAAGGTA AAGCGTCGACCCTGACATCCTCAGAGCAGACAGGGATTGAGGTCATCCTC CCGGAGGACTGTATTTCTGAAGAGGAAGAGATCTCGTTTACTGTCACACC AGTCGACAGAGACACACTTGCGTGTGCTGGGATGGAGGATTCAATAGAAA ACATGAGTCACATTGTCAACTTCTTCAAAGGCAGCAACCTACTTCTCAAC CGCCCCGCCACCATTATGCTACCGCTGTCGTCTGGAGAAGACGACAGCCA AGTCCGCGTCCTCAGTTGCAATGAGAACGGGGACTGGGAAGATGTCACCA GTAAAGTGGAGGATGTCGTCCTACAGGGGTCAAAGGTTGCTTTTAAGACA GACCGGCTCAGTTCTGGTTTTGTTGTGCTTCACTGCAATGACGTCAGCTA CTGTGGAATTGAGACTCTTCCTGACTCTATTGGACAGGCGTCCTCATTGA AGGAAATCCACCTTGCCGGCAACAAACTGCGTACTCTTCCTGACAGCTTC GGGCGCCTACTCAATCTGGAAACTCTTGATTTGGAGGGAAACCGCCGACT GTCCGCTTTGCCATATGCGCTTCACCGCCTGCAGAAGCTGAAAGACAAAA AGATCGGGACAAAACAGGGCCTTGTCCTGAACGACACACCGACACTGACA CTTCCAGACCACAAGATTGTCCGAGAGGGCGTAGTCTCCGTGCGCACTGA GCTGCTAACAGAGGGCTGCATCAACGGTATCGTAGCCACCATTGAGGCGG AGGTTATTGACAACACCATCATCGAAAGTCTGTCCGAAGACATTGTCACG ATCGTTAATGGTGGTTTGGCTGATGACCTGATACTGCACATGACAAACGT TGCAATCGCAGAAGAAAGGTGCGTTGGCGACATTTTCACGTCCATCTTTG AAGACGTCAGCTTGCCGCTTGTGAAGGAGATCAGCAACAAAACCGTGGAC GAAGAAAATGCTATCTTAGATGCAAAGGCATGTCCGGTGATGGAAGAGCT TATGGAGGAAATCATCCAGGCAACAACAAAGGCAATCGTCTTGGAACAGG AGGAAGAATGGCGCCTGGGCCAGACCGTTCCGGGCGAATACGACAAGCTG TTCAGCTATGACATATCAACAGTCACAAGCACCGTGCAGTCCCTGGACCT TCCAGCCGGATGCAACTTGAGCATCCCTCCCGGAGCTACAGATGTAGATA CATCTGTAATATCACTAGTACTGAACCCACACGGGTACGACGGAACACTC CACCTGGAAGACACGGAGCTACTTGTCAGTGACATCATCGAGATGAGACC ATCGGGAATGACGTTCTCCGAGCCCGTGAAGCTTAAGATTCCACATTCTT TACCCAAGTATGACTGCGAAAGGGAGTACATTGTGATGACGTCAGAGGAT GACGGGCGGACGTGGGTGGCTCTGGGAACAGTTAGCGAACAAGAGAAAGG GCAGCGGTTTGTTACGGTAGAGGTAACGCATTTCTCTTCGTTCGCTGTCA TTGCGAGGCCATTGGAGCACTGCCACAGAGTGAGACAAGGTAAAGCGTCG ACCCTGACATCCTCAGAGCAGACAGGGATTGAGGTCATCCTCCCGGAGGA CTGTATTTCTGAAGAGGAAGAGATCTCGTTTACTGTCACACCAGTCGACA GAGACACACTTGCGTGTGCTGGGATGGAGGATTCAATAGAAAACATGAGT CACATTGTCAACTTCTTCAAAGGCAGCAACCTACTTCTCAACCGCCCCGC CACCATTATGCTACCGCTGTCGTCTGGAGAAGACGACAGCCAAGTCCGCG TCCTCAGTTGCAATGAGAACGGGGACTGGGAAGATGTCACCAGTAAAGTG GAGGATGTCGTCCTACAGGGGTCAAAGGTTGCTTTTAAGACAGACCGGCT CAGTTCTGGTTTTGTTGTGCTTCACTGCAATGACGTCAGCTACTGTGGAA TTGAGACTCTTCCTGACTCTATTGGACAGGCGTCCTCATTGAAGGAAATC CACCTTGCCGGCAACAAACTGCGTACTCTTCCTGACAGCTTCGGGCGCCT ACTCAATCTGGAAACTCTTGATTTGGAGGGAAACCGCCGACTGTCCGCTT TGCCATATGCGCTTCACCGCCTGCAGAAGCTGAAAGACAAAAAGATCGGG ACAAAACAGGGCCTTGTCCTGAACGACACACCGACACTGACACTTCCAGA CCACAAGATTGTCCGAGAGGGCGTAGTCTCCGTGCGCACTGAGCTGCTAA CAGAGGGCTGCATCAACGGTATCGTAGCCACCATTGAGGCGGAGGTTATT GACAACACCATCATCGAAAGTCTGTCCGAAGACATTGTCACGATCGTTAA TGGTGGTTTGGCTGATGACCTGATACTGCACATGACAAACGTTGCAATCG CAGAAGAAAGGTGCGTTGGCGACATTTTCACGTCCATCTTTGAAGACGTC AGCTTGCCGCTTGTGAAGGAGATCAGCAACAAAACCGTGGACGAAGAAAA TGCTATCTTAGATGCAAAGGCATGTCCGGTGATGGAAGAGCTTATGGAGG AAATCATCCAGGCAACAACAAAGGCAATCGTCTTGGAACAGGAGGAAGAA TGGCGCCTGGGCCAGACCGTTCCGGGCGAATACGACAAGCTGTTCAGCTA TGACATATCAACAGTCACAAGCACCGTGCAGTCCCTGGACCTTCCAGCCG GATGCAACTTGAGCATCCCTCCCGGAGCTACAGATGTAGATACATCTGTA ATATCACTAGTACTGAACCCACACGGGTACGACGGAACACTCCACCTGGA AGACACGGAGCTACTTGTCAGTGACATCATCGAGATGAGACCATCGGGAA TGACGTTCTCCGAGCCCGTGAAGCTTAAGATTCCACATTCTTTACCCAAG TATGACTGCGAAAGGGAGTACATTGTGATGACGTCAGAGGATGACGGGCG GACGTGGGTGGCTCTGGGAACAGTTAGCGAACAAGAGAAAGGGCAGCGGT TTGTTACGGTAGAGGTAACGCATTTCTCTTCGTTCGCTGTCATTGCGAGG CCATTGGAGCACTGCCACAGAGTGAGACAAGGTAAAGCGTCGACCCTGAC ATCCTCAGAGCAGACAGGGATTGAGGTCATCCTCCCGGAGGACTGTATTT CTGAAGAGGAAGAGATCTCGTTTACTGTCACACCAGTCGACAGAGACACA CTTGCGTGTGCTGGGATGGAGGATTCAATAGAAAACATGAGTCACATTGT CAACTTCTTCAAAGGCAGCAACCTACTTCTCAACCGCCCCGCCACCATTA TGCTACCGCTGTCGTCTGGAGAAGACGACAGCCAAGTCCGCGTCCTCAGT TGCAATGAGAACGGGGACTGGGAAGATGTCACCAGTAAAGTGGAGGATGT CGTCCTACAGGGGTCAAAGGTTGCTTTTAAGACAGACCGGCTCAGTTCTG GTTTTGTTGTGCTTCACTGCAATGACGTCAGCTACTGTGGAATTGAGACT CTTCCTGACTCTATTGGACAGGCGTCCTCATTGAAGGAAATCCACCTTGC CGGCAACAAACTGCGTACTCTTCCTGACAGCTTCGGGCGCCTACTCAATC TGGAAACTCTTGATTTGGAGGGAAACCGCCGACTGTCCGCTTTGCCATAT GCGCTTCACCGCCTGCAGAAGCTGAAAGACAAAAAGATCGGGACAAAACA GGGCCTTGTCCTGAACGACACACCGACACTGACACTTCCAGACCACAAGA TTGTCCGAGAGGGCGTAGTCTCCGTGCGCACTGAGCTGCTAACAGAGGGC TGCATCAACGGTATCGTAGCCACCATTGAGGCGGAGGTTATTGACAACAC CATCATCGAAAGTCTGTCCGAAGACATTGTCACGATCGTTAATGGTGGTT TGGCTGATGACCTGATACTGCACATGACAAACGTTGCAATCGCAGAAGAA AGGTGCGTTGGCGACATTTTCACGTCCATCTTTGAAGACGTCAGCTTGCC GCTTGTGAAGGAGATCAGCAACAAAACCGTGGACGAAGAAAATGCTATCT TAGATGCAAAGGCATGTCCGGTGATGGAAGAGCTTATGGAGGAAATCATC CAGGCAACAACAAAGGCAATCGTCTTGGAACAGGAGGAAGAATGGCGCCT GGGCCAGACCGTTCCGGGCGAATACGACAAGCTGTTCAGCTATGACATAT CAACAGTCACAAGCACCGTGCAGTCCCTGGACCTTCCAGCCGGATGCAAC TTGAGCATCCCTCCCGGAGCTACAGATGTAGATACATCTGTAATATCACT AGTACTGAACCCACACGGGTACGACGGAACACTCCACCTGGAAGACACGG AGCTACTTGTCAGTGACATCATCGAGATGAGACCATCGGGAATGACGTTC TCCGAGCCCGTGAAGCTTAAGATTCCACATTCTTTACCCAAGTATGACTG CGAAAGGGAGTACATTGTGATGACGTCAGAGGATGACGGGCGGACGTGGG TGGCTCTGGGAACAGTTAGCGAACAAGAGAAAGGGCAGCGGTTTGTTACG GTAGAGGTAACGCATTTCTCTTCGTTCGCTGTCATTGCGAGGCCATTGGA GCACTGCCACAGAGTGAGACAAGGTAAAGCGTCGACCCTGACATCCTCAG AGCAGACAGGGATTGAGGTCATCCTCCCGGAGGACTGTATTTCTGAAGAG GAAGAGATCTCGTTTACTGTCACACCAGTCGACAGAGACACACTTGCGTG TGCTGGGATGGAGGATTCAATAGAAAACATGAGTCACATTGTCAACTTCT TCAAAGGCAGCAACCTACTTCTCAACCGCCCCGCCACCATTATGCTACCG CTGTCGTCTGGAGAAGACGACAGCCAAGTCCGCGTCCTCAGTTGCAATGA GAACGGGGACTGGGAAGATGTCACCAGTAAAGTGGAGGATGTCGTCCTAC AGGGGTCAAAGGTTGCTTTTAAGACAGACCGGCTCAGTTCTGGTTTTGTT GTGCTTCACTGCAATGACGTCAGCTACTGTGGAATTGAGACTCTTCCTGA CTCTATTGGACAGGCGTCCTCATTGAAGGAAATCCACCTTGCCGGCAACA AACTGCGTACTCTTCCTGACAGCTTCGGGCGCCTACTCAATCTGGAAACT CTTGATTTGGAGGGAAACCGCCGACTGTCCGCTTTGCCATATGCGCTTCA CCGCCTGCAGAAGCTGAAAGACAAAAAGATCGGGACAAAACAGGGCCTTG TCCTGAACGACACACCGACACTGACACTTCCAGACCACAAGATTGTCCGA GAGGGCGTAGTCTCCGTGCGCACTGAGCTGCTAACAGAGGGCTGCATCAA CGGTATCGTAGCCACCATTGAGGCGGAGGTTATTGACAACACCATCATCG AAAGTCTGTCCGAAGACATTGTCACGATCGTTAATGGTGGTTTGGCTGAT GACCTGATACTGCACATGACAAACGTTGCAATCGCAGAAGAAAGGTGCGT TGGCGACATTTTCACGTCCATCTTTGAAGACGTCAGCTTGCCGCTTGTGA AGGAGATCAGCAACAAAACCGTGGACGAAGAAAATGCTATCTTAGATGCA AAGGCATGTCCGGTGATGGAAGAGCTTATGGAGGAAATCATCCAGGCAAC AACAAAGGCAATCGTCTTGGAACAGGAGGAAGAATGGCGCCTGGGCCAGA CCGTTCCGGGCGAATACGACAAGCTGTTCAGCTATGACATATCAACAGTC ACAAGCACCGTGCAGTCCCTGGACCTTCCAGCCGGATGCAACTTGAGCAT CCCTCCCGGAGCTACAGATGTAGATACATCTGTAATATCACTAGTACTGA ACCCACACGGGTACGACGGAACACTCCACCTGGAAGACACGGAGCTACTT GTCAGTGACATCATCGAGATGAGACCATCGGGAATGACGTTCTCCGAGCC CGTGAAGCTTAAGATTCCACATTCTTTACCCAAGTATGACTGCGAAAGGG AGTACATTGTGATGACGTCAGAGGATGACGGGCGGACGTGGGTGGCTCTG GGAACAGTTAGCGAACAAGAGAAAGGGCAGCGGTTTGTTACGGTAGAGGT AACGCATTTCTCTTCGTTCGCTGTCATTGCGAGGCCATTGGAGCACTGCC ACAGAGTGAGACAAGGTAAAGCGTCGACCCTGACATCCTCAGAGCAGACA GGGATTGAGGTCATCCTCCCGGAGGACTGTATTTCTGAAGAGGAAGAGAT CTCGTTTACTGTCACACCAGTCGACAGAGACACACTTGCGTGTGCTGGGA TGGAGGATTCAATAGAAAACATGAGTCACATTGTCAACTTCTTCAAAGGC AGCAACCTACTTCTCAACCGCCCCGCCACCATTATGCTACCGCTGTCGTC TGGAGAAGACGACAGCCAAGTCCGCGTCCTCAGTTGCAATGAGAACGGGG ACTGGGAAGATGTCACCAGTAAAGTGGAGGATGTCGTCCTACAGGGGTCA AAGGTTGCTTTTAAGACAGACCGGCTCAGTTCTGGTTTTGTTGTGCTTCA CTGCAATGAC
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
Sc0000167 | genome | Sc0000167:151272..153703 + |
Properties
Property Name | Value |
Transcript id | BL96761_cuf0 |
Biotype | protein_coding |
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