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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL96753_cuf9 >transcript:BL96753_cuf9-protein ID=transcript:BL96753_cuf9-protein|Name=transcript:BL96753_cuf9|organism=Branchiostoma lanceolatum|type=polypeptide|length=161bp
MEFLRRLPVAISAFLFLLPIALCTGTGDTASNRFRDPAMTQDKHHLKEHV
QELTEEQINQMSPEEMEFHFFKSHDGDKDLKLDGLEIMAAIEHSSDYGLP
PDYNEMMEYLMGLVDKILEDDDSDDDGMISWIEYVIARRRREVMAEAARK
QKQAEMKQQGN Run BLAST on NCBI mRNA from alignment at Sc0000163:592849..595055+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL96753_cuf9 ID=transcript:BL96753_cuf9|Name=transcript:BL96753_cuf9|organism=Branchiostoma lanceolatum|type=mRNA|length=2207bp|location=Sequence derived from alignment at Sc0000163:592849..595055+ (Branchiostoma lanceolatum)
CTTCGGCACAAATACTCACTCACATGAGGATAGTAGTAGTAACGCACTAG
CAGCGCAAATCCTAAGCTATCAACATGGAGTTTTTACGTCGTTTGCCGGT
GGCCATCAGTGCCTTTCTGTTTCTTTTGCCGATTGCATTATGCACTGGTA
CCGGCGATACTGCAAGCAACAGGTTTCGGGATCCAGCAATGACACAGGAT
AAACAGTAGGTTTTTATGGTTTTATGGTCAGATAACCATATGGAATAATG
TGGGAAGCGTCACATAAGGAACTAAACAGTCATTATTGCAAATTTTGAAT
TCTTACTGTGGATATAAAGACAATTCTATCATTTTGATATGTACGAATCT
TTAACACTTTAACATATCTACGGCGTAAAGGTTTTCGTTATGTATTTTGT
AATTTTCATTTACAACAGAACGGAACGAGAAGCCATGGTGTGAACGGACA
CAGCTGTGTGCCCCCTCCCTACAGACGACTTACTTTTCATATGGTTACAG
AGCTAGCTAAGTTTTAGGAGAGCTTTTCTAATGATCATGAATAATCCGGT
GATATTTTTCTATAGTCACCTTAAGGAGCACGTCCAAGAGCTGACGGAAG
AACAGATTAACCAGATGTCACCTGAAGAAATGGAGTTCCACTTCTTCAAG
TGAGTATATCCCTCTGAAGAAACTTCTGATGAATCAAAAATAAGGGTAGG
CTGTAGAAAAACTTAAATTACTTACACCAAGTTTGCATCATGTCCCCAGT
GGAATGCCCTGCCTGGCACGGTTGTGACCGCTCCCACCGTTGAGTCGTTC
CGTGCCAGGCTGGAGGCCTGCCCACCCTAGCTCGGGACCTCAACTCCCCC
TACTTTGCCCCTAATGAGGTTATTTGGGGGTACAGATGATGATGATGTTG
ATGATCTCAATCTACCCTTGATTAGATCAAATTACATGAAACTTGTTCTT
CTGTTTTCGTCGTTAACCACAGGTCTCATGACGGAGACAAGGACTTGAAG
TTGGACGGACTGGAGATCATGGCCGCCATCGAACATTCATCCGACTATGG
CCTCCCTCCTGACTACAACGAAATGATGGAGTACTTAATGGGTACAAACA
GCACTTATGGGGCTAGCCCTCTGAAGTAGTGCTTTTGCAGCTGTGTGGCC
CACGGGCTATAGAAACGGAGATGGGCGCCGCAATATACACCATATGGAAT
GGGACGGACTTTAATTTAGTATATACATGTACCATACAGTACGGTTTGAT
TTTGAACAAGCATAAACTCCTAAAATGTTGTACTTCAGATTTTCCCCCTG
GTCAGTATATGCACTTTCTAGATTTGTTCTGTAACATTTCTTGTGTTGAT
TATTGTTTTCAAATCATACAGATTTTCCGCACTTCCTGTATGGAAATCTT
GGTCCCTAATTTTTCGTTTCTGACGCGCAGGTTTGGTGGACAAGATCCTG
GAGGACGATGACTCCGACGATGACGGCATGATCAGCTGGATTGAATACGT
CATCGCCAGGAGAAGGCGCGAAGTCATGGCTGAAGCTGCGCGGAAACAAA
AACAGGCGGAAATGAAACAACAGGGGAATTAACGTTAAATGTACAAGTGC
AATTAGTTAGATGTAGAAAACTTTGAAAATTGAAAATTTATGGAATAGGA
AATACATGGCACGTACAGCTGTTTATAGCCACACATGTATCTAAAAGCAC
CTGTACAGAAATGTCATAGCATATTATGATATATATATATCACAAAATCT
TTCGTTATTATATCTATCCACCATAAATATAAAGGAAGAAACTGTGTAAT
TATACTTTCCGAACCGCTTTGAAAGATGAAAAGGAAATCATCGAAGGGCC
AAGCATCTGAACGAAATAAACAAGGTTATTTCACGGTGAAGCGCTCCCCT
TTGATAGCGCTGATCTTGAACAATCCTTTTCTAGAGGATTTGTTGTTTGG
TGATAAGCTTAGCTGTGTGAAATATAGTGGAATGATATTCCCCTTTATCT
ATATAACAGTTACGTACTCTGCCTTGAAAACTTATTATGATGTTGCCACA
GTAATCGTATAGTGTGTGTGTGTGTACGTTTATGAACTAAAGTGGCTATA
TACTAGTATCTAACATAGAGGAACTACTAAAACCGCTTAAGATACTATGT
CCACTTGGTATCCGGATGAGACTATCTTACAAAACGCAATAAAAATCTTG
ATAACCT Coding sequence (CDS) from alignment at Sc0000163:592849..595055+ >transcript:BL96753_cuf9 ID=transcript:BL96753_cuf9|Name=transcript:BL96753_cuf9|organism=Branchiostoma lanceolatum|type=CDS|length=1944bp|location=Sequence derived from alignment at Sc0000163:592849..595055+ (Branchiostoma lanceolatum)
ATGGAGTTTTTACGTCGTTTGCCGGTGGCCATCAGTGCCTTTCTGTTTCT
TTTGCCGATTGCATTATGCACTGGTACCGGCGATACTGCAAGCAACAGGT
TTCGGGATCCAGCAATGACACAGGATAAACATCACCTTAAGGAGCACGTC
CAAGAGCTGACGGAAGAACAGATTAACCAGATGTCACCTGAAGAAATGGA
GTTCCACTTCTTCAAGTCTCATGACGGAGACAAGGACTTGAAGTTGGACG
GACTGGAGATCATGGCCGCCATCGAACATTCATCCGACTATGGCCTCCCT
CCTGACTACAACGAAATGATGGAGTACTTAATGGGTTTGGTGGACAAGAT
CCTGGAGGACGATGACTCCGACGATGACGGCATGATCAGCTGGATTGAAT
ACGTCATCGCCAGGAGAAGGCGCGAAGTCATGGCTGAAGCTGCGCGGAAA
CAAAAACAGGCGGAAATGAAACAACAGGGGAATTAAATGGAGTTTTTACG
TCGTTTGCCGGTGGCCATCAGTGCCTTTCTGTTTCTTTTGCCGATTGCAT
TATGCACTGGTACCGGCGATACTGCAAGCAACAGGTTTCGGGATCCAGCA
ATGACACAGGATAAACATCACCTTAAGGAGCACGTCCAAGAGCTGACGGA
AGAACAGATTAACCAGATGTCACCTGAAGAAATGGAGTTCCACTTCTTCA
AGTCTCATGACGGAGACAAGGACTTGAAGTTGGACGGACTGGAGATCATG
GCCGCCATCGAACATTCATCCGACTATGGCCTCCCTCCTGACTACAACGA
AATGATGGAGTACTTAATGGGTTTGGTGGACAAGATCCTGGAGGACGATG
ACTCCGACGATGACGGCATGATCAGCTGGATTGAATACGTCATCGCCAGG
AGAAGGCGCGAAGTCATGGCTGAAGCTGCGCGGAAACAAAAACAGGCGGA
AATGAAACAACAGGGGAATTAAATGGAGTTTTTACGTCGTTTGCCGGTGG
CCATCAGTGCCTTTCTGTTTCTTTTGCCGATTGCATTATGCACTGGTACC
GGCGATACTGCAAGCAACAGGTTTCGGGATCCAGCAATGACACAGGATAA
ACATCACCTTAAGGAGCACGTCCAAGAGCTGACGGAAGAACAGATTAACC
AGATGTCACCTGAAGAAATGGAGTTCCACTTCTTCAAGTCTCATGACGGA
GACAAGGACTTGAAGTTGGACGGACTGGAGATCATGGCCGCCATCGAACA
TTCATCCGACTATGGCCTCCCTCCTGACTACAACGAAATGATGGAGTACT
TAATGGGTTTGGTGGACAAGATCCTGGAGGACGATGACTCCGACGATGAC
GGCATGATCAGCTGGATTGAATACGTCATCGCCAGGAGAAGGCGCGAAGT
CATGGCTGAAGCTGCGCGGAAACAAAAACAGGCGGAAATGAAACAACAGG
GGAATTAAATGGAGTTTTTACGTCGTTTGCCGGTGGCCATCAGTGCCTTT
CTGTTTCTTTTGCCGATTGCATTATGCACTGGTACCGGCGATACTGCAAG
CAACAGGTTTCGGGATCCAGCAATGACACAGGATAAACATCACCTTAAGG
AGCACGTCCAAGAGCTGACGGAAGAACAGATTAACCAGATGTCACCTGAA
GAAATGGAGTTCCACTTCTTCAAGTCTCATGACGGAGACAAGGACTTGAA
GTTGGACGGACTGGAGATCATGGCCGCCATCGAACATTCATCCGACTATG
GCCTCCCTCCTGACTACAACGAAATGATGGAGTACTTAATGGGTTTGGTG
GACAAGATCCTGGAGGACGATGACTCCGACGATGACGGCATGATCAGCTG
GATTGAATACGTCATCGCCAGGAGAAGGCGCGAAGTCATGGCTGAAGCTG
CGCGGAAACAAAAACAGGCGGAAATGAAACAACAGGGGAATTAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000163 | genome | Sc0000163:592849..595055 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL96753_cuf9 |
| Biotype | protein_coding |
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