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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL96752_cuf6 >transcript:BL96752_cuf6-protein ID=transcript:BL96752_cuf6-protein|Name=transcript:BL96752_cuf6|organism=Branchiostoma lanceolatum|type=polypeptide|length=120bp
MTIFNICRSHLKEHVKELTEEQINEMSSEEKEFHFFKTHDSDKDLKLDGL
EILAAIEHSTHFNTHEDKDMTEYYAELVDKVLVDDDPDDDGMISWIEYVV
ASRRREVEAEAAHARKQKVA Run BLAST on NCBI mRNA from alignment at Sc0000163:590531..592715+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL96752_cuf6 ID=transcript:BL96752_cuf6|Name=transcript:BL96752_cuf6|organism=Branchiostoma lanceolatum|type=mRNA|length=2185bp|location=Sequence derived from alignment at Sc0000163:590531..592715+ (Branchiostoma lanceolatum)
GCCGCACGCATTATGCACTGGTACTGACGAAACTCCAAGCAACAAGTTTC
GGGATCCAGCAATGACACAGGATAAAGAGTGGGTTTTCATGGTTCTGTCT
TTGTTTTTAGCTTGCCATATGGAACGATGTGGGAAGTGTTTCATAAGGAA
CTTTAACACTTCTACTTCATTATTACAAAATTTTGAAATCGAGACATTAT
ATTGTGGATAATGTTGTCATTTTGATAGATAGAGTACAGAAATTCATCAT
TCAGATGTCATAGTTTAGGAAGTAAATGTTTTTGTTATATTTTCATTAAT
AATGGGACGGATTAGCGTTCGAGAGACCTGGGCTGTGTACACCTCCCCAC
ACAGACGACCTGCCTTCCAACTCCGAATTAAAGCATGTCTATGGTTACAG
AGCTAACTATATGACAATCTTTAATATTTGCCGTAGTCACCTGAAGGAAC
ACGTCAAAGAGCTGACGGAAGAACAGATCAACGAGATGTCATCTGAAGAA
AAGGAGTTCCACTTCTTCAAGTGAGTCACTCTTTTTAACCTTCACCCTGC
TGCCTAACCCTATGAGAGGAGATGGTTTGGACACCTCCGCTTAGCAGATA
ATAATGGGTATTAGACTTGGTTTATACATTCTCTCGCTGGCTGGGGTTAA
TGACCTCTTCCCCAAGGGCGGCAGGGGCTGTATTTTCCAAATCTTTTTTT
CTTATTCTGTCATGTGTACCCAGGGTAGCCCTGCTCAGTGATTAACACTG
CTTTACATAGGGGCCCTGTAGCCGTCGGGCCAACCGCTAGGAGCGCGATG
TAGTCAGGCTAGACTTGAGCCATTGACATCAACTTATAATATCTGTAGGG
ATTCGTACGTGTGATTAGATTGAACAATATGAAATCGTCGCCTCTCCACA
GGACTCACGACAGTGATAAGGACTTGAAGTTGGACGGACTGGAGATCCTG
GCCGCCATCGAACATTCAACCCACTTTAACACGCATGAAGATAAAGATAT
GACGGAGTACTATGCAGGTACATACAGCTTTATGGAAACACATATAGCAG
TTAAACACATGTCACTACCACTGGACTAGCCTTCTGCTGCAGTAGCCTGA
GTACCAGCCTTTTTAGCTTCCGTCCGTCCGTCTTGCACAGTTGTGGATTT
TGAACAAGCATAAACTCCCCCCATTTTGAACTCTGAATTTTCATCAAGCA
TCATGTATTTATGGATTTTTCTGGGTTTTCTGTCTGCAACGTTCCGGCGT
AAAGGAGTGTTTTATTACTGAACAAACTATTGAATGCCCAGAGAAAATAT
TTGTTTGTCCCCTTAACTTGTTTCTTCTGTGCAGAATTAGTGGACAAGGT
CCTGGTGGACGATGACCCTGACGATGACGGCATGATCAGCTGGATTGAAT
ACGTCGTCGCCAGCCGAAGGCGCGAAGTCGAGGCTGAAGCCGCGCATGCG
CGGAAACAAAAAGTGGCATGACGAAAACAACAAGAACAACAGGGGAACTA
GATGCATTAATGCAATGCACTAGATGATGATAAATATGATACTTAGAACA
AATTGATAGAATTTGAAATATATGGTACATGCAGCCAATGCTTACAATGA
TTAGTAGTGAAACATCTGAAAGCACATGTCCAAAACTGCATGTCCAAATC
TACATACGTGTGGCAGGTTATGATATAATTGCCGTTTTAATGTACAACTT
AAAATGAAAATACTGTGTAATTAGATTTTCCAAACCACCCTGAACGTTTA
AAAACCAAGTGATTGTCGAGGGACCAAGCATCTAAACGAACATAACACGG
TAATTTCATGGTGAGGTGCTCTTTTAAGGAAGCGATGATCTTAAACAATT
CTTTTCTAAAAGAATTGTCGTTTGACGACGAGATTACTTGTGTGAAATAA
AGCGGAATAACATTTCTGTCTTTTCTGTACAGCAGTTACGTACTTCGCCT
TAAAGTCTGATGTTGTTGCCGAGAAATAGTTTTGTGGCTGTGTGTACGTT
TATGAAATAAAGCGGCTATCTACCTATTTCAGGATAAATGTTTTACACGT
TTGTACGTCCAGCGGTTCGTATTTTAGTTACCTTCCGAAGCAATGTCACT
ATGATAAGGCTAAGGACTGAAAGTGTGAATTGGTAATAAATGCCCTTTCC
TCTGTCTGAACTGTTCTGATGCTTCTCATTCTCAC Coding sequence (CDS) from alignment at Sc0000163:590531..592715+ >transcript:BL96752_cuf6 ID=transcript:BL96752_cuf6|Name=transcript:BL96752_cuf6|organism=Branchiostoma lanceolatum|type=CDS|length=1089bp|location=Sequence derived from alignment at Sc0000163:590531..592715+ (Branchiostoma lanceolatum)
ATGACAATCTTTAATATTTGCCGTAGTCACCTGAAGGAACACGTCAAAGA
GCTGACGGAAGAACAGATCAACGAGATGTCATCTGAAGAAAAGGAGTTCC
ACTTCTTCAAGACTCACGACAGTGATAAGGACTTGAAGTTGGACGGACTG
GAGATCCTGGCCGCCATCGAACATTCAACCCACTTTAACACGCATGAAGA
TAAAGATATGACGGAGTACTATGCAGAATTAGTGGACAAGGTCCTGGTGG
ACGATGACCCTGACGATGACGGCATGATCAGCTGGATTGAATACGTCGTC
GCCAGCCGAAGGCGCGAAGTCGAGGCTGAAGCCGCGCATGCGCGGAAACA
AAAAGTGGCATGAATGACAATCTTTAATATTTGCCGTAGTCACCTGAAGG
AACACGTCAAAGAGCTGACGGAAGAACAGATCAACGAGATGTCATCTGAA
GAAAAGGAGTTCCACTTCTTCAAGACTCACGACAGTGATAAGGACTTGAA
GTTGGACGGACTGGAGATCCTGGCCGCCATCGAACATTCAACCCACTTTA
ACACGCATGAAGATAAAGATATGACGGAGTACTATGCAGAATTAGTGGAC
AAGGTCCTGGTGGACGATGACCCTGACGATGACGGCATGATCAGCTGGAT
TGAATACGTCGTCGCCAGCCGAAGGCGCGAAGTCGAGGCTGAAGCCGCGC
ATGCGCGGAAACAAAAAGTGGCATGAATGACAATCTTTAATATTTGCCGT
AGTCACCTGAAGGAACACGTCAAAGAGCTGACGGAAGAACAGATCAACGA
GATGTCATCTGAAGAAAAGGAGTTCCACTTCTTCAAGACTCACGACAGTG
ATAAGGACTTGAAGTTGGACGGACTGGAGATCCTGGCCGCCATCGAACAT
TCAACCCACTTTAACACGCATGAAGATAAAGATATGACGGAGTACTATGC
AGAATTAGTGGACAAGGTCCTGGTGGACGATGACCCTGACGATGACGGCA
TGATCAGCTGGATTGAATACGTCGTCGCCAGCCGAAGGCGCGAAGTCGAG
GCTGAAGCCGCGCATGCGCGGAAACAAAAAGTGGCATGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000163 | genome | Sc0000163:590531..592715 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL96752_cuf6 |
| Biotype | protein_coding |
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