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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL96742_cuf49 >transcript:BL96742_cuf49-protein ID=transcript:BL96742_cuf49-protein|Name=transcript:BL96742_cuf49|organism=Branchiostoma lanceolatum|type=polypeptide|length=204bp
QEDQGEVFTWGDNDEGQLGDGTTNAIPRPRLVAALQGKKINRVACGSAHS
LAWSTSKPVNAGKLPVQVPMEYNHLQNITMPVLRNRLVLLHHFSDLFCPS
IPMFDLLRAGKLADENGSKPLVGLDTLRGVLVSAGKEAAFRKVVQATMVR
DRQHGPVIELNRIQVKRSRSKGGLAGPDGIKSVFGQMCSKMASFTPDSLL
LPHX Run BLAST on NCBI mRNA from alignment at Sc0000068:1426031..1429010+ Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL96742_cuf49 ID=transcript:BL96742_cuf49|Name=transcript:BL96742_cuf49|organism=Branchiostoma lanceolatum|type=mRNA|length=2980bp|location=Sequence derived from alignment at Sc0000068:1426031..1429010+ (Branchiostoma lanceolatum)
CAAGAAGACCAAGGTAGGAGAAACATTAATTTAAGTGATCACCTTTTCCT
ACTACCTGCACACACACATACTTATCATGTAATAATCAATAATTGCTACA
TATACAACGAAAAAAAGAATATGAATGAAGTCACCACAACCTACCCTAAC
TTTCACAAATTCATGAATAAACAGGTCTAGAAAGCCACTCCCCTCTTAAA
ACCAAAGAACCCACAACAAATTATAGAAAACGTGGGGCTTTTCGTTTTCA
TCTGCTTCCAAAAAAAGAAGCCAAACCCAACTAACACTGGTATAGTATTT
GAAAAGTCCTTTGTTATGATATTGTCAATCACTTGTCATATGTATATTTC
TTATTTCTCTACCACATGCATGTTTCCCAAGTACGTGTACTTGCAATTTG
CCTTCGTAGAAACTGGAATAGACCCACCTGTGCATGTGTTGTGACCAGGT
GATTTACCTGTATTGTCCACAGGTGAGGTGTTTACCTGGGGAGACAATGA
TGAGGGACAGCTCGGAGACGGAACCACTAACGCTATCCCCCGCCCCAGGC
TAGTGGCTGCTCTCCAAGGTAACTGTTCCTTCATTGCTTCCTTAACCTTC
TTTTTGCTGCATAACTACATAATTAGTACACATCTGGTGCAACAAGGCTA
TTGTAGCAGGGGGAATGTTAATGGGACCACTAATGTCATTCCCTGGCCCA
GGCTCCTAGTTCCATAAATGACACAAAATTTGTGCAACAATGATGCCACT
GTTCGGTGGTATTCCTGAACTGCATAGGAATTCAATCCCTGGCCAAGCTG
TCAGTAATCCTATGCCAAGTTTACATGCTTATAGAAGGAGTTGCATTTAT
CTTCCAAGTAATGCATACTTTTCTAACTTCTTCTAGAACTCCCAATTTGT
TGTCTATTTCATCCATTCATTGTTAAAGAGCTGACATTTGTTCTCTAACA
CATTGAAAAATATCAACAGAGTGGCGTGTGGCTCTAAATGATACATGCTT
TTCTAGCTTCTTCTAGAAATCTCTATTCCTGAACCTTTCCTTACAAATTA
GCTTGCATGTGAATATTGCAAATTTTTGTCACCCAGGGAAAAAGATCAAC
AGAGTTGCGTGTGGCTCGGCCCACAGCCTTGCCTGGTCCACCTCCAAGCC
GGTGAACGCGGGGAAACTGCCGGTCCAGGTCCCTATGGAGTACAACCACC
TGCAGAACATCACCATGCCGGTCCTGCGCAACCGCCTGGTGCTCCTGCAC
CACTTCTCAGACCTCTTCTGCCCCTCCATCCCCATGTTCGACCTCCTCAG
GGGTAGGCTATTCTAGATATATTCCTGCACCACTTCTCCGACCTCTTCTG
TCCCTCCATCCCCATGTTCGACCTCCTCAGGGGTAGGCTATTGGAGATAC
TGTAAATCACTTTAATATAGCGGTAGGAAAATATAGCAGAAAATAGAGTA
GGTCACTGCACTTAACTTCAACGGTGGGAACAAACATTACTGTCTCAAAT
ATTACTGATCAAATATTAACGATGATGAAATTTTAGCTGTTGACTAGTGA
CTGTTAAATCAGCTAAAATTAAGTTACAGTTAACAAATAAAGAATTACAG
TATATTCATTTTTGCTTGGATTCAATTCAGTGGTTTATTTATTTACTTAT
TGGTTTGGCTCTCCCGGACACAAAACCCGGGCTGCCCAACTAGCCTGTGG
CTATTACAAAGGGCTAGCCCTGCTAACAGAAACAATACAGTACATTGGAA
TTATTTATTTTTTATTTATATCTGTTTTCTTTATGCAAGGTAGGCGCACG
CAGTGCTAAACGCACTGCTTTACAGGCGTGCCCTGTACAATTATGATATG
AACAAGCTATAACAATATTAAGAGTTCTGTGGTAGAAGTGGAAAGGATTT
TTTTGCTGTATTTCAAGGTCGTGGTTGAACCACATACATTGGACATGCAT
GAATTTGCTGTGAATTTGCGGTGGAGAGGTCATGACGAAATCCCCAGAAA
CGAGACCACCGCAAACCTTTCAAGATTTACAAAATTCCTCTATGATTTCA
TCACCCTGCTTCCTAATTTCATAACTAATACAAATTTTGTGCAACAAAGC
AGGGAAGCTGGCTGATGAAAACGGGAGCAAGCCGCTGGTGGGGCTGGATA
CTCTGCGGGGGGTCCTGGTGTCGGCCGGGAAAGAGGCCGCGTTCAGGAAG
GTGGTCCAGGCCACCATGGTTCGGGACAGGCAGCACGGCCCCGTCATAGA
GCTGAATAGGATACAGGTGGGTTGGGTCTTCTTTGTAGACTGATGCAATT
GCCAAGTAGCCTCGGTACCATCCTCCGTACTAACCGCTGGCTCAATCTTT
TCGCTTGCTAACCGCAGATTTAGCAAGCAAAACGATTGAGCTAGCGGTTA
CAATGGAGGAAGGTACCCAGGCTAATGGCCAGGTAATTTTTTGCCTTGCA
TTTCTTAGGTCGTGAGTGAAATGGAGATGGACGCCGCCCTATTCACCATC
TGGTGCAGGAAGGACTCCAGCTTAACTAACTTGGTCTTCACTTGTAAAGT
TCATCTGTGTTGGTAGAAATCATTCTGAATCAACATTGAACTGTAATTTC
CAACACCAACATTGGACTTACCCAAAGTTTTGACTTTCCAACTCCAGTCT
TTCACAAGGAATGAGCAATCCACTGCTTCTGTGATGTCACACTATGCAAA
TTGAACATGTGAGCATAAGTGGATCATAAGTTATAGAAAGTTTATGACGA
CACGAATGAGCCATCGGTGAACTACAGATGACGGTACCCAAGCTAGGCTT
TGTCTTATTTTGAAACAGTTTAAAAGAAATGTTGTCATCTTATGAAATGT
TTCCTTCCAGGTGAAGCGTTCCAGGAGTAAAGGCGGGCTGGCGGGTCCTG
ACGGGATCAAGTCGGTGTTCGGCCAGATGTGCTCCAAGATGGCGTCCTTC
ACGCCAGACAGCCTGCTGCTGCCCCACANA Coding sequence (CDS) from alignment at Sc0000068:1426031..1429010+ >transcript:BL96742_cuf49 ID=transcript:BL96742_cuf49|Name=transcript:BL96742_cuf49|organism=Branchiostoma lanceolatum|type=CDS|length=3060bp|location=Sequence derived from alignment at Sc0000068:1426031..1429010+ (Branchiostoma lanceolatum)
CAAGAAGACCAAGGTGAGGTGTTTACCTGGGGAGACAATGATGAGGGACA
GCTCGGAGACGGAACCACTAACGCTATCCCCCGCCCCAGGCTAGTGGCTG
CTCTCCAAGGGAAAAAGATCAACAGAGTTGCGTGTGGCTCGGCCCACAGC
CTTGCCTGGTCCACCTCCAAGCCGGTGAACGCGGGGAAACTGCCGGTCCA
GGTCCCTATGGAGTACAACCACCTGCAGAACATCACCATGCCGGTCCTGC
GCAACCGCCTGGTGCTCCTGCACCACTTCTCAGACCTCTTCTGCCCCTCC
ATCCCCATGTTCGACCTCCTCAGGGCAGGGAAGCTGGCTGATGAAAACGG
GAGCAAGCCGCTGGTGGGGCTGGATACTCTGCGGGGGGTCCTGGTGTCGG
CCGGGAAAGAGGCCGCGTTCAGGAAGGTGGTCCAGGCCACCATGGTTCGG
GACAGGCAGCACGGCCCCGTCATAGAGCTGAATAGGATACAGGTGAAGCG
TTCCAGGAGTAAAGGCGGGCTGGCGGGTCCTGACGGGATCAAGTCGGTGT
TCGGCCAGATGTGCTCCAAGATGGCGTCCTTCACGCCAGACAGCCTGCTG
CTGCCCCACANACAAGAAGACCAAGGTGAGGTGTTTACCTGGGGAGACAA
TGATGAGGGACAGCTCGGAGACGGAACCACTAACGCTATCCCCCGCCCCA
GGCTAGTGGCTGCTCTCCAAGGGAAAAAGATCAACAGAGTTGCGTGTGGC
TCGGCCCACAGCCTTGCCTGGTCCACCTCCAAGCCGGTGAACGCGGGGAA
ACTGCCGGTCCAGGTCCCTATGGAGTACAACCACCTGCAGAACATCACCA
TGCCGGTCCTGCGCAACCGCCTGGTGCTCCTGCACCACTTCTCAGACCTC
TTCTGCCCCTCCATCCCCATGTTCGACCTCCTCAGGGCAGGGAAGCTGGC
TGATGAAAACGGGAGCAAGCCGCTGGTGGGGCTGGATACTCTGCGGGGGG
TCCTGGTGTCGGCCGGGAAAGAGGCCGCGTTCAGGAAGGTGGTCCAGGCC
ACCATGGTTCGGGACAGGCAGCACGGCCCCGTCATAGAGCTGAATAGGAT
ACAGGTGAAGCGTTCCAGGAGTAAAGGCGGGCTGGCGGGTCCTGACGGGA
TCAAGTCGGTGTTCGGCCAGATGTGCTCCAAGATGGCGTCCTTCACGCCA
GACAGCCTGCTGCTGCCCCACANACAAGAAGACCAAGGTGAGGTGTTTAC
CTGGGGAGACAATGATGAGGGACAGCTCGGAGACGGAACCACTAACGCTA
TCCCCCGCCCCAGGCTAGTGGCTGCTCTCCAAGGGAAAAAGATCAACAGA
GTTGCGTGTGGCTCGGCCCACAGCCTTGCCTGGTCCACCTCCAAGCCGGT
GAACGCGGGGAAACTGCCGGTCCAGGTCCCTATGGAGTACAACCACCTGC
AGAACATCACCATGCCGGTCCTGCGCAACCGCCTGGTGCTCCTGCACCAC
TTCTCAGACCTCTTCTGCCCCTCCATCCCCATGTTCGACCTCCTCAGGGC
AGGGAAGCTGGCTGATGAAAACGGGAGCAAGCCGCTGGTGGGGCTGGATA
CTCTGCGGGGGGTCCTGGTGTCGGCCGGGAAAGAGGCCGCGTTCAGGAAG
GTGGTCCAGGCCACCATGGTTCGGGACAGGCAGCACGGCCCCGTCATAGA
GCTGAATAGGATACAGGTGAAGCGTTCCAGGAGTAAAGGCGGGCTGGCGG
GTCCTGACGGGATCAAGTCGGTGTTCGGCCAGATGTGCTCCAAGATGGCG
TCCTTCACGCCAGACAGCCTGCTGCTGCCCCACANACAAGAAGACCAAGG
TGAGGTGTTTACCTGGGGAGACAATGATGAGGGACAGCTCGGAGACGGAA
CCACTAACGCTATCCCCCGCCCCAGGCTAGTGGCTGCTCTCCAAGGGAAA
AAGATCAACAGAGTTGCGTGTGGCTCGGCCCACAGCCTTGCCTGGTCCAC
CTCCAAGCCGGTGAACGCGGGGAAACTGCCGGTCCAGGTCCCTATGGAGT
ACAACCACCTGCAGAACATCACCATGCCGGTCCTGCGCAACCGCCTGGTG
CTCCTGCACCACTTCTCAGACCTCTTCTGCCCCTCCATCCCCATGTTCGA
CCTCCTCAGGGCAGGGAAGCTGGCTGATGAAAACGGGAGCAAGCCGCTGG
TGGGGCTGGATACTCTGCGGGGGGTCCTGGTGTCGGCCGGGAAAGAGGCC
GCGTTCAGGAAGGTGGTCCAGGCCACCATGGTTCGGGACAGGCAGCACGG
CCCCGTCATAGAGCTGAATAGGATACAGGTGAAGCGTTCCAGGAGTAAAG
GCGGGCTGGCGGGTCCTGACGGGATCAAGTCGGTGTTCGGCCAGATGTGC
TCCAAGATGGCGTCCTTCACGCCAGACAGCCTGCTGCTGCCCCACANACA
AGAAGACCAAGGTGAGGTGTTTACCTGGGGAGACAATGATGAGGGACAGC
TCGGAGACGGAACCACTAACGCTATCCCCCGCCCCAGGCTAGTGGCTGCT
CTCCAAGGGAAAAAGATCAACAGAGTTGCGTGTGGCTCGGCCCACAGCCT
TGCCTGGTCCACCTCCAAGCCGGTGAACGCGGGGAAACTGCCGGTCCAGG
TCCCTATGGAGTACAACCACCTGCAGAACATCACCATGCCGGTCCTGCGC
AACCGCCTGGTGCTCCTGCACCACTTCTCAGACCTCTTCTGCCCCTCCAT
CCCCATGTTCGACCTCCTCAGGGCAGGGAAGCTGGCTGATGAAAACGGGA
GCAAGCCGCTGGTGGGGCTGGATACTCTGCGGGGGGTCCTGGTGTCGGCC
GGGAAAGAGGCCGCGTTCAGGAAGGTGGTCCAGGCCACCATGGTTCGGGA
CAGGCAGCACGGCCCCGTCATAGAGCTGAATAGGATACAGGTGAAGCGTT
CCAGGAGTAAAGGCGGGCTGGCGGGTCCTGACGGGATCAAGTCGGTGTTC
GGCCAGATGTGCTCCAAGATGGCGTCCTTCACGCCAGACAGCCTGCTGCT
GCCCCACANA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000068 | genome | Sc0000068:1426031..1429010 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL96742_cuf49 |
| Biotype | protein_coding |
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