|
|
Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL96733_cuf8 >transcript:BL96733_cuf8-protein ID=transcript:BL96733_cuf8-protein|Name=transcript:BL96733_cuf8|organism=Branchiostoma lanceolatum|type=polypeptide|length=213bp
ERADMLAAAFARLPQKVVWRYAGTPPPSLGSNTKTMNWLPQSDLLAHPKT
KAFVSHCGYNGVSEAMYHGVPLIGMPLFGDQHDNIVRVVARGMAVSLDIH
SVTSEEVYQAITTVISDPRYKERAKFISTIQQDQPQSPMERAIWWIEHVI
KHGGLPHLRSRAIELPFYQYYLLDVLALIVAVITVILLSCWKCCLFACSM
CKRSRTDIKHKTS Run BLAST on NCBI mRNA from alignment at Sc0000059:1595849..1599618- Legend: exonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL96733_cuf8 ID=transcript:BL96733_cuf8|Name=transcript:BL96733_cuf8|organism=Branchiostoma lanceolatum|type=mRNA|length=3770bp|location=Sequence derived from alignment at Sc0000059:1595849..1599618- (Branchiostoma lanceolatum)
GAGAGAGCCGACATGCTGGCCGCTGCTTTCGCCCGTCTGCCGCAGAAGGT
CGTGTGGCGCTACGCTGGGACGCCACCTCCAAGTCTGGGGTCCAACACCA
AGACCATGAATTGGTTACCTCAAAGTGACTTACTAGGTACATGCTACTTG
AATGCTTTGGAGACTGACGTGAATCCGTTGTTGTTTTTCGTACACGGTAG
ATGTCTTTTGTAGTATAAGCATTTTACATATTAAGCAATCTTCATTTCTG
ATTCTTTGCTACCTTGCCTTGAATAAGAAGGTATTTCCGGCCCATAGTAT
TTCCTCTAACTTACTACTGTGACAATATTTATATTACAGCTCATCCAAAA
ACCAAGGCGTTTGTATCACATTGCGGTTATAATGGCGTATCAGAGGCCAT
GTACCACGGAGTGCCCCTGATCGGCATGCCTCTGTTCGGTGACCAACATG
ACAACATCGTCCGAGTGGTGGCCCGAGGGATGGCGGTGTCACTGGACATC
CACAGCGTGACGTCAGAAGAAGTTTACCAGGCCATCACTACCGTTATTTC
AGACCCCAGGTAAGTGCAGGAAGCGTAGGTAGAGTTAGAAGACTNCACAG
AGTGACGTCAGAAGAAGTTTACCAGGCCATCACTACCGTTATTTCAGACC
CCAGGTAAGTGCAGGAAGCGTAGGTAGAGTTAGAAGACTTTATAGATAAT
ATGAAAAGGTGCTTGGCGTCTTCACTTATATGCGATCTGAGCCAGTCTTG
TCCACCCTGTTTGATGGCGGACCTGGTCAAGTCCACGGAGCTTTGTACAT
GTCCTGTGTTGGATATCAAATGCACATCAACGGCTCTCACCTCTTTCAAT
GAACTAAAGCGATCAGTTGCCTGAAACAATCTACATCACATTATCGTTCT
TAATTTAAAACGATTTACGTATATGATTCAAAATAGCCCTGCGCCAGTCT
GGTTTGTGCGAAAGAAAATGGGCTAACTTTAGAATTTATTTCAGGTACAA
GGAAAGGGCCAAATTCATCTCCACCATCCAACAAGACCAACCACAGTCAC
CCATGGAGCGGGCAATATGGTGGATAGAACACGTCATCAAACATGGTGGC
CTCCCTCATCTAAGGTCAAGGGCAATCGAACTGCCCTTCTACCAGTACTA
CCTGTTAGACGTCCTGGCTCTGATTGTGGCAGTTATAACTGTTATATTGT
TGAGCTGTTGGAAGTGCTGTTTGTTTGCTTGCAGCATGTGCAAAAGGAGT
AGAACCGACATCAAACATAAAACTTCCTAACTCTTCGAGTGCGCCAAATA
TGTCACAGAGAAAAAGAAGTGAATATGTAGATGTGTTGGGAAAATGTCAA
CGTAGATGCACTTTACCTTTTATTTCAAAGTAATATGTACGATTGGAGTT
GTAGAAATCTTTATGTAAATTCGCAGAAGTGTTGGTGACTATCTCTCCTT
GAATTGAGGGACAGTGCAGAACATCAAAATAGTATGGATATGAAATTGAA
CAAAATAGGAAGAATAACACTAGAGTTATCGCAACGTAATATTATGCAAG
GGAAGAGGCAAGTTGTCGAATTCGCACGTAGAAAGTAATGAAAATAAGAA
ATCATTTGAACTACTGCATTCAACAAAGAAACCAGGATGACATTAGTAAC
ATTCGTTTTTATGTTTAGCCATACCTAGTATGGCTCAACATATTGTTTTT
ACTCTTCTCCTGTCAAATCTTGAAATCGATTCATTTCTGTCATTTTTTGA
CCAAATGATCTGAAATTTGGTACAAAGGTAGTGTAGACAAATACCCCCGG
ACGTTTCTTTTTTTCATTTTTACGATATTGACATTGAAATTGGTTTTATT
GAGGTTTTTCTGACCAAAAACGTACATTTTGGCCTCCTGTGCTCTGGAAA
TACATCCAAATGACCTTAAATTTGCTAAGGGAGTACATTGAACACATATT
CAAAGAACCCCATTCGCACTTTTGGTATACATCACTTAAAAATACGATTT
TTGCAGGGTATTTTGGGGAGAACATTGGTTATTTTCCTCATATGACCATA
TATGGTGTTGCCAACACAACCTAAAGGTCAGTGACCCCAAGTGCCAGGTG
CGCATGGCCTCGCCTGTGAGCCTTGCGACCACCTGATTGGCCAATTGAGC
AAATCTATTCATCTTGCATTTCTGGCGCAGGTGTGCTAGTATTTATACCA
AATGTGGTATGGGAATGCCTAGCCTATGACATGTGCTTACATGGCTTTGT
TCGCTCTTTTTTTAACAAAGATACACATCTCCAGTTCCTATGTGTTAAAC
CAAAATGATGTGAAATTTGGCATGTGTCTGCCTTGGTCATGTACACAGGC
CCTCATTCAAATGTTTGGCATACAGCCTTTTAAAACGATTTTTGAAATAA
ACAATTTTTTTTTCGTTTCGTTATTTCAACCCAAAATGTATACTATTGAA
GCATGCATTCAAACATAGGGGTGTCACATTTTTATATTTCACCCATACTA
TCGCTGCAATATGTTGTTTTTGGTCATTTCCTTCTTCTCCTGCTAAATCT
TCATAATATATCATTATGTATACAATGGAAAACTACATTCTTCCCTGGGG
TTAATCTTTTTTAATTCAATTTTGAACTGGGTTGATTATCCGCAAGAGTG
TAATTTTGAGCAGATATTTTGGTCTAGTTTACATGGAGATGGCACGGAAT
ATCCCATTCTTGCAAGGGGGGATTCTTTAATTATGTATTTCAATTTTGAG
CTGGAGTGATTATGAAAAAGTCCATTCGTTAGCAGAAGTGGATTTGTTTT
AAGTGAATATGGTTTTGGACTGGTCCATATTGTGTTTAGGCGCTAATGGA
AGACTCCATTCCTGTATGGAGAGACTAGTTGTTTTTAAACTCAAATTTTG
GACTGGGGTGATCCATTTTTTAGTGGAAGTATTTTAGAATGGTCCATTGT
TATTTTGGGACAGTCCATTTTTTGCATGACGAGGAGCATGGCTAAACATG
CTGTATTTGCTCACAAATGTTGCCTTTCTAGTTGTATGTCGTTTCCACAT
GATTTATCTGTATACATGCATTCGGAAGTTAAATGAAGGTGAACATTATC
ATACATTAAGTATGCAATCCATAACACACCTTTCACACACATCTTCCATA
CAAGTTAACACCATACGGCGAAGGTTCGGGATCGCCGAACTCTAGTTATT
GATTGCCGACCAGGATCAATGAAACAAGATTGTGTGTAGTTCAATGTATT
GAAAATCTCACATTTTTACATCATCATACAATACTCTCTTCATTTGGTGT
GCCATACCATTAAATTATGCTGAATTGCAAAAGCAACATTCATAAACAAT
AGATTGTAATTACTTTGGGTCACACAGACTTAGGAACTCAATATGGTTAG
ATTCCATTATTTTTCTCACATGCCAAATGTTTTAATCTTGCTTCCGCTTG
CTAAACTTTTGCAAATAAAAGAATCTATAAAATGTCAAAACAAAACTCTG
TGTGACCTAACAATGCAAGTTGACTCACTCAGCAATCGCTCAACTTGTAT
GCAGAATAAGCTAAGTATGTCTTTTCCCCTCTAGGCTTGAACATATGGAA
ATAAGCAACGTCTTGTTGATGTGTTTATATCGATCTCAAATATGGCGTGC
TCATAACAATTCTTTACAGTTTCACAACTTCTGCACTCTAAAGAATGACT
GCCTTTTCATGCAACGCTCAAATGTTTCACCTCAATTGAGGATAAGAAGT
TAAGAGCTTGCAGTTGCCAG Coding sequence (CDS) from alignment at Sc0000059:1595849..1599618- >transcript:BL96733_cuf8 ID=transcript:BL96733_cuf8|Name=transcript:BL96733_cuf8|organism=Branchiostoma lanceolatum|type=CDS|length=1926bp|location=Sequence derived from alignment at Sc0000059:1595849..1599618- (Branchiostoma lanceolatum)
GAGAGAGCCGACATGCTGGCCGCTGCTTTCGCCCGTCTGCCGCAGAAGGT
CGTGTGGCGCTACGCTGGGACGCCACCTCCAAGTCTGGGGTCCAACACCA
AGACCATGAATTGGTTACCTCAAAGTGACTTACTAGCTCATCCAAAAACC
AAGGCGTTTGTATCACATTGCGGTTATAATGGCGTATCAGAGGCCATGTA
CCACGGAGTGCCCCTGATCGGCATGCCTCTGTTCGGTGACCAACATGACA
ACATCGTCCGAGTGGTGGCCCGAGGGATGGCGGTGTCACTGGACATCCAC
AGCGTGACGTCAGAAGAAGTTTACCAGGCCATCACTACCGTTATTTCAGA
CCCCAGGTACAAGGAAAGGGCCAAATTCATCTCCACCATCCAACAAGACC
AACCACAGTCACCCATGGAGCGGGCAATATGGTGGATAGAACACGTCATC
AAACATGGTGGCCTCCCTCATCTAAGGTCAAGGGCAATCGAACTGCCCTT
CTACCAGTACTACCTGTTAGACGTCCTGGCTCTGATTGTGGCAGTTATAA
CTGTTATATTGTTGAGCTGTTGGAAGTGCTGTTTGTTTGCTTGCAGCATG
TGCAAAAGGAGTAGAACCGACATCAAACATAAAACTTCCTAAGAGAGAGC
CGACATGCTGGCCGCTGCTTTCGCCCGTCTGCCGCAGAAGGTCGTGTGGC
GCTACGCTGGGACGCCACCTCCAAGTCTGGGGTCCAACACCAAGACCATG
AATTGGTTACCTCAAAGTGACTTACTAGCTCATCCAAAAACCAAGGCGTT
TGTATCACATTGCGGTTATAATGGCGTATCAGAGGCCATGTACCACGGAG
TGCCCCTGATCGGCATGCCTCTGTTCGGTGACCAACATGACAACATCGTC
CGAGTGGTGGCCCGAGGGATGGCGGTGTCACTGGACATCCACAGCGTGAC
GTCAGAAGAAGTTTACCAGGCCATCACTACCGTTATTTCAGACCCCAGGT
ACAAGGAAAGGGCCAAATTCATCTCCACCATCCAACAAGACCAACCACAG
TCACCCATGGAGCGGGCAATATGGTGGATAGAACACGTCATCAAACATGG
TGGCCTCCCTCATCTAAGGTCAAGGGCAATCGAACTGCCCTTCTACCAGT
ACTACCTGTTAGACGTCCTGGCTCTGATTGTGGCAGTTATAACTGTTATA
TTGTTGAGCTGTTGGAAGTGCTGTTTGTTTGCTTGCAGCATGTGCAAAAG
GAGTAGAACCGACATCAAACATAAAACTTCCTAAGAGAGAGCCGACATGC
TGGCCGCTGCTTTCGCCCGTCTGCCGCAGAAGGTCGTGTGGCGCTACGCT
GGGACGCCACCTCCAAGTCTGGGGTCCAACACCAAGACCATGAATTGGTT
ACCTCAAAGTGACTTACTAGCTCATCCAAAAACCAAGGCGTTTGTATCAC
ATTGCGGTTATAATGGCGTATCAGAGGCCATGTACCACGGAGTGCCCCTG
ATCGGCATGCCTCTGTTCGGTGACCAACATGACAACATCGTCCGAGTGGT
GGCCCGAGGGATGGCGGTGTCACTGGACATCCACAGCGTGACGTCAGAAG
AAGTTTACCAGGCCATCACTACCGTTATTTCAGACCCCAGGTACAAGGAA
AGGGCCAAATTCATCTCCACCATCCAACAAGACCAACCACAGTCACCCAT
GGAGCGGGCAATATGGTGGATAGAACACGTCATCAAACATGGTGGCCTCC
CTCATCTAAGGTCAAGGGCAATCGAACTGCCCTTCTACCAGTACTACCTG
TTAGACGTCCTGGCTCTGATTGTGGCAGTTATAACTGTTATATTGTTGAG
CTGTTGGAAGTGCTGTTTGTTTGCTTGCAGCATGTGCAAAAGGAGTAGAA
CCGACATCAAACATAAAACTTCCTAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000059 | genome | Sc0000059:1595849..1599618 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL96733_cuf8 |
| Biotype | protein_coding |
|
