|
|
Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL96719_cuf6 >transcript:BL96719_cuf6-protein ID=transcript:BL96719_cuf6-protein|Name=transcript:BL96719_cuf6|organism=Branchiostoma lanceolatum|type=polypeptide|length=101bp
ECQVSNEGTQSQRTEFEMDLNDREKYAQDFRPVLPGCSCYCCQNHGPAYI
HHLLQTGELLARVLLMMHNFHHYFGFFSAIRESLHQGTFQELKAIVTQRT
K Run BLAST on NCBI mRNA from alignment at Sc0000027:1693891..1696985+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL96719_cuf6 ID=transcript:BL96719_cuf6|Name=transcript:BL96719_cuf6|organism=Branchiostoma lanceolatum|type=mRNA|length=3095bp|location=Sequence derived from alignment at Sc0000027:1693891..1696985+ (Branchiostoma lanceolatum)
AAGAGTGTCAGGTGTCAAACGAAGGCACACAGTCACAGAGAACCGAGTTT
GAGATGGATCTCAATGACAGGGAAAAGTAGTAAGTCAAAATTCAACTGTT
TCTTTTGTTTGCTAAATGTGTATGCTATAGTTATGAGTATGTTATAGTCT
GTGGTGTCTAAGATTTGATGAACACATAGTATGGCTGTAGTCAATCAAAA
TATACATTTATAATTTCATTTCAAATCAAAATGTTCATTTATGAATGCAA
GGTTTTAGTGTAAATGCTTGTCTTTTTGTAATGGTTTTATTTCGCAGGAG
GGAAAAGGTTTTCGTAGCTGGAACAATTCTGTGGTACAGCCGTACAGGTC
ATGTAAGATAGACTTCTTCGCAGTGTCATGAATTTGTGGTATAAACGTTA
CCGCTAAAGTTTTAAAATTTACTATAAGCACTGGAGCACACATGGTGAAC
CTTTCTTTATAGTTCTTAATTGCATGTGATAGGTGAGTTTGGGGGAATGG
CTGCTTTATGTTACGAACCATAGCTTCATCTTTGAAACCTTACCTCTCTA
CTGTCCCACTGTAGTGCACAGGACTTCAGACCAGTGCTCCCAGGCTGCTC
ATGTTACTGTTGCCAGAACCACGGCCCGGCATACATCCACCATCTACTGC
AGACAGGGGAACTCCTGGCCAGAGTGCTGCTTATGATGTAAGTATTTGTG
TACACTCAAAATTGCCCCAAAAGACCACTCCGTGCCAATACAATCTTGTG
TATGTGGACACTATAGACAGGATTCTTAATGCTTGTGTCAATGGGAAAAA
TTATCAAACCACCAAAAAGTGCTCACATTGGCTAAGTGGTGGTTGTCACT
TGTGTTTGTATGCATGGCTTTCGTATATTACCGTTTTATGTTATAGACTT
TGTATTTGATGCCTTCCTACCCTGAAAAATTGTTGTATATATTTAGTACA
TTGTGTAAAAAAACTTTTCTTCCCTTTGCTGATTAATACACAGCTTAAGT
TTACATTTCGAATATTTTGTTGTTGCTGCAGGCATAACTTTCATCACTAT
TTTGGATTCTTCTCGGCTATAAGGGAGTCACTACACCAGGGGACATTCCA
AGAGCTGAAAGCTATTGTCACTCAAAGGACCAAATAGTNTCAAGCAATTC
TTTCTATACCATTATGTACTAGTATGCAACTAACAGAGTTTTTCATTACA
ATTTAGGCCTTGCCTTGACCCAGGAATTATTACAGATTTCCCTACCAGGT
TACAGAGAGAGGCTGTGCTCTTGTCTTCCCCTTTGCCAAGAAGTCAGACA
TCTGTGAAGAGACAATGATACATAGTTCTGATAATGCTAGTAAGGAAACA
ACGGAGAACCAAGAGTGTCAGGTGTCAAACGAAGGCACACAGTCACAGAG
AACCGAGTTTGAGATGGATCTCAATGACAGGGAAAAGTAGTAAGTCAAAA
TTCAACTGTTTCTTTTGTTTGCTAAATGTGTATGCTATAGTTATGAGTAT
GTTATAGTCTGTGGTGTCTAAGATTTGATGAACACATAGTATGGCTGTAG
TCAATCAAAATATACATTTATAATTTCATTTCAAATCAAAATGTTCATTT
ATGAATGCAAGGTTTTAGTGTAAATGCTTGTCTTTTTGTAATGGTTTTAT
TTCGCAGGAGGGAAAAGGTTTTCGTAGCTGGAACAATTCTGTGGTACAGC
CGTACAGGTCATGTAAGATAGACTTCTTCGCAGTGTCATGAATTTGTGGT
ATAAACGTTACCGCTAAAGTTTTAAAATTTACTATAAGCACTGGAGCACA
CATGGTGAACCTTTCTTTATAGTTCTTAATTGCATGTGATAGGTGAGTTT
GGGGGAATGGCTGCTTTATGTTACGAACCATAGCTTCATCTTTGAAACCT
TACCTCTCTACTGTCCCACTGTAGTGCACAGGACTTCAGACCAGTGCTCC
CAGGCTGCTCATGTTACTGTTGCCAGAACCACGGCCCGGCATACATCCAC
CATCTACTGCAGACAGGGGAACTCCTGGCCAGAGTGCTGCTTATGATGTA
AGTATTTGTGTACACTCAAAATTGCCCCAAAAGACCACTCCGTGCCAATA
CAATCTTGTGTATGTGGACACTATAGACAGGATTCTTAATGCTTGTGTCA
ATGGGAAAAATTATCAAACCACCAAAAAGTGCTCACATTGGCTAAGTGGT
GGTTGTCACTTGTGTTTGTATGCATGGCTTTCGTATATTACCGTTTTATG
TTATAGACTTTGTATTTGATGCCTTCCTACCCTGAAAAATTGTTGTATAT
ATTTAGTACATTGTGTAAAAAAACTTTTCTTCCCTTTGCTGATTAATACA
CAGCTTAAGTTTACATTTCGAATATTTTGTTGTTGCTGCAGGCATAACTT
TCATCACTATTTTGGATTCTTCTCGGCTATAAGGGAGTCACTACACCAGG
GGACATTCCAAGAGCTGAAAGCTATTGTCACTCAAAGGACCAAATAGTTG
TTAGTCGCCATTAACTATGTTAAAAGATTACTTTCAAGGGCATGTCCGTG
ATAACTCCATAAATATCAAAAACTATACCTTCTACATTTTGGTGTAATGA
TATATTTATCAATGTGGAAGTTATGAAATAGCTGATATGGTTTCCTGGAC
TAGCAGTTATTTTACCTATTACATGGGCAAGACATGTAACTTTTCTATCA
TGTACTACACTGAGATAAGCTTTTTAAAGGTAAAACCATTCCAGCAACTT
ACTGGCCAGAATAAAGTATTCCAACCATTAAAATGACTTGTCTGATTTTG
GTGGGTTCTGTTGAAAATTTAGTTAACGTTTTGTATAGAGATAGAAAACA
AGATGCATCAATTGATGATGTAGTCTGTTATATCAGTGTATATGCCCTTC
CCCTAGTTCTCTAGACTTCAGAAGTGACTAGCAGAAATAAGGGTTATGTT
TCTGTGATTCCAAGTTAACCTCTCCCACTCACTTTTAAGTTCATCACATT
TGATTCTGTTAACTGTCTAACAATGGTATAAGTTTTTGGTTCTTTGTATT
TGATCAGAAGAATAGTGTAAGATTTGTGAATAAAACAATCGTCTC Coding sequence (CDS) from alignment at Sc0000027:1693891..1696985+ >transcript:BL96719_cuf6 ID=transcript:BL96719_cuf6|Name=transcript:BL96719_cuf6|organism=Branchiostoma lanceolatum|type=CDS|length=918bp|location=Sequence derived from alignment at Sc0000027:1693891..1696985+ (Branchiostoma lanceolatum)
GAGTGTCAGGTGTCAAACGAAGGCACACAGTCACAGAGAACCGAGTTTGA
GATGGATCTCAATGACAGGGAAAAGTATGCACAGGACTTCAGACCAGTGC
TCCCAGGCTGCTCATGTTACTGTTGCCAGAACCACGGCCCGGCATACATC
CACCATCTACTGCAGACAGGGGAACTCCTGGCCAGAGTGCTGCTTATGAT
GCATAACTTTCATCACTATTTTGGATTCTTCTCGGCTATAAGGGAGTCAC
TACACCAGGGGACATTCCAAGAGCTGAAAGCTATTGTCACTCAAAGGACC
AAATAGGAGTGTCAGGTGTCAAACGAAGGCACACAGTCACAGAGAACCGA
GTTTGAGATGGATCTCAATGACAGGGAAAAGTATGCACAGGACTTCAGAC
CAGTGCTCCCAGGCTGCTCATGTTACTGTTGCCAGAACCACGGCCCGGCA
TACATCCACCATCTACTGCAGACAGGGGAACTCCTGGCCAGAGTGCTGCT
TATGATGCATAACTTTCATCACTATTTTGGATTCTTCTCGGCTATAAGGG
AGTCACTACACCAGGGGACATTCCAAGAGCTGAAAGCTATTGTCACTCAA
AGGACCAAATAGGAGTGTCAGGTGTCAAACGAAGGCACACAGTCACAGAG
AACCGAGTTTGAGATGGATCTCAATGACAGGGAAAAGTATGCACAGGACT
TCAGACCAGTGCTCCCAGGCTGCTCATGTTACTGTTGCCAGAACCACGGC
CCGGCATACATCCACCATCTACTGCAGACAGGGGAACTCCTGGCCAGAGT
GCTGCTTATGATGCATAACTTTCATCACTATTTTGGATTCTTCTCGGCTA
TAAGGGAGTCACTACACCAGGGGACATTCCAAGAGCTGAAAGCTATTGTC
ACTCAAAGGACCAAATAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000027 | genome | Sc0000027:1693891..1696985 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL96719_cuf6 |
| Biotype | protein_coding |
|
