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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL96714_cuf3 >transcript:BL96714_cuf3-protein ID=transcript:BL96714_cuf3-protein|Name=transcript:BL96714_cuf3|organism=Branchiostoma lanceolatum|type=polypeptide|length=170bp
MAVRVRSHFILLVLLLHHGSCQLDIQGFSGSAVTGEGQHEGLMESSLAYG
QLLEYVEGLKNDTQRCCEAHWTVWTDEQQQSFAGVQTTLDDQALIMQQQE
ATIQQQQTTINQLQSLLSQLSDKLNGPRDCMELWATGHDTSGVYTIYPDG
GGKSPVHVYCDMDTDGGGWT Run BLAST on NCBI mRNA from alignment at Sc0000027:2172960..2174022+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL96714_cuf3 ID=transcript:BL96714_cuf3|Name=transcript:BL96714_cuf3|organism=Branchiostoma lanceolatum|type=mRNA|length=1063bp|location=Sequence derived from alignment at Sc0000027:2172960..2174022+ (Branchiostoma lanceolatum)
CTCTTACATGACATTGTACATTAGCCGGATCTTCGGCTGAAGCAGTCATT
TCTGTCACGCTACCATGGCTGTACGTGTCCGTTCGCACTTCATCCTCCTG
GTCCTGCTGCTGCATCACGGCAGCTGTCAGCTCGATATTCAGGGTTTTTC
TGGATCAGCTGTCACCGGAGAAGGACAACACGAAGGTTTGATGGAGTCTT
CTCTGGCATATGGGCAGCTGCTGGAGTACGTGGAGGGACTGAAGAACGAC
ACGCAGCGATGCTGTGAGGCACACTGGACGGTAATTAAGTCTCCGAATGG
TCTTCAACGTTCGGCGAAAGGCATACCCAAGGACATTATATAGTCTAAAT
ATAGCAAGTCACTGCGTGCAAGAGTGCAACAAGCCAGGTTACGCAGTTGT
GCTTTCTTTCCCTGGATAATTTTCATAAATGACTTCGATAAGCCTGTTCT
ACTAAACACAATATGGTTACAAAAAATCAATGCGACAGTCTTTATTTAGA
CTCATTCGCCTATCACTGATCTTGCAGTATCATACCACGTTCCGCATTAT
TGCTAGGTATGGACGGATGAACAACAGCAGTCCTTTGCTGGTGTGCAGAC
AACCCTGGATGACCAGGCTCTCATCATGCAACAACAAGAAGCCACCATAC
AACAGCAACAAACCACAATAAACCAACTGCAAAGTCTTCTGAGCCAGCTC
TCAGGTTCATTGAATTGATTTTGTATTACTTTCAATTTAGCAGTCAATAA
TCATTACTCATGCAAAGCCATAATTATTCGACAAAAGATCGACTTCAGTT
TGTTGCATTGTTGTGTAAAGATCACTTTGTTCTGTAGTTAAACAAAGACT
AGGCATAAGATGTCATGTGCTTCCGTACAAGTAAAGAAATGCAAACTTAC
GTGTTTACAAACCCAGACAAGCTGAACGGCCCCCGTGACTGTATGGAACT
GTGGGCGACTGGACACGATACCAGCGGTGTGTACACCATCTACCCTGATG
GAGGAGGGAAAAGTCCTGTTCACGTCTACTGTGACATGGACACTGACGGC
GGTGGATGGACGG Coding sequence (CDS) from alignment at Sc0000027:2172960..2174022+ >transcript:BL96714_cuf3 ID=transcript:BL96714_cuf3|Name=transcript:BL96714_cuf3|organism=Branchiostoma lanceolatum|type=CDS|length=1530bp|location=Sequence derived from alignment at Sc0000027:2172960..2174022+ (Branchiostoma lanceolatum)
ATGGCTGTACGTGTCCGTTCGCACTTCATCCTCCTGGTCCTGCTGCTGCA
TCACGGCAGCTGTCAGCTCGATATTCAGGGTTTTTCTGGATCAGCTGTCA
CCGGAGAAGGACAACACGAAGGTTTGATGGAGTCTTCTCTGGCATATGGG
CAGCTGCTGGAGTACGTGGAGGGACTGAAGAACGACACGCAGCGATGCTG
TGAGGCACACTGGACGGTATGGACGGATGAACAACAGCAGTCCTTTGCTG
GTGTGCAGACAACCCTGGATGACCAGGCTCTCATCATGCAACAACAAGAA
GCCACCATACAACAGCAACAAACCACAATAAACCAACTGCAAAGTCTTCT
GAGCCAGCTCTCAGACAAGCTGAACGGCCCCCGTGACTGTATGGAACTGT
GGGCGACTGGACACGATACCAGCGGTGTGTACACCATCTACCCTGATGGA
GGAGGGAAAAGTCCTGTTCACGTCTACTGTGACATGGACACTGACGGCGG
TGGATGGACGATGGCTGTACGTGTCCGTTCGCACTTCATCCTCCTGGTCC
TGCTGCTGCATCACGGCAGCTGTCAGCTCGATATTCAGGGTTTTTCTGGA
TCAGCTGTCACCGGAGAAGGACAACACGAAGGTTTGATGGAGTCTTCTCT
GGCATATGGGCAGCTGCTGGAGTACGTGGAGGGACTGAAGAACGACACGC
AGCGATGCTGTGAGGCACACTGGACGGTATGGACGGATGAACAACAGCAG
TCCTTTGCTGGTGTGCAGACAACCCTGGATGACCAGGCTCTCATCATGCA
ACAACAAGAAGCCACCATACAACAGCAACAAACCACAATAAACCAACTGC
AAAGTCTTCTGAGCCAGCTCTCAGACAAGCTGAACGGCCCCCGTGACTGT
ATGGAACTGTGGGCGACTGGACACGATACCAGCGGTGTGTACACCATCTA
CCCTGATGGAGGAGGGAAAAGTCCTGTTCACGTCTACTGTGACATGGACA
CTGACGGCGGTGGATGGACGATGGCTGTACGTGTCCGTTCGCACTTCATC
CTCCTGGTCCTGCTGCTGCATCACGGCAGCTGTCAGCTCGATATTCAGGG
TTTTTCTGGATCAGCTGTCACCGGAGAAGGACAACACGAAGGTTTGATGG
AGTCTTCTCTGGCATATGGGCAGCTGCTGGAGTACGTGGAGGGACTGAAG
AACGACACGCAGCGATGCTGTGAGGCACACTGGACGGTATGGACGGATGA
ACAACAGCAGTCCTTTGCTGGTGTGCAGACAACCCTGGATGACCAGGCTC
TCATCATGCAACAACAAGAAGCCACCATACAACAGCAACAAACCACAATA
AACCAACTGCAAAGTCTTCTGAGCCAGCTCTCAGACAAGCTGAACGGCCC
CCGTGACTGTATGGAACTGTGGGCGACTGGACACGATACCAGCGGTGTGT
ACACCATCTACCCTGATGGAGGAGGGAAAAGTCCTGTTCACGTCTACTGT
GACATGGACACTGACGGCGGTGGATGGACG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000027 | genome | Sc0000027:2172960..2174022 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL96714_cuf3 |
| Biotype | protein_coding |
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