|
|
Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL96685_cuf13 >transcript:BL96685_cuf13-protein ID=transcript:BL96685_cuf13-protein|Name=transcript:BL96685_cuf13|organism=Branchiostoma lanceolatum|type=polypeptide|length=131bp
MCKSVFAPGRRATLCGTLDYLPPEMIEGKMHDEKVDLWSLGVLCYEFLVG
KPPFEAEGHSETYRRISKVDLRFPPHVTSGARDLISKLLRHNPMLRLPLD
SVLTHPWIKDHAATQAESTPAHPTHASHTKS Run BLAST on NCBI mRNA from alignment at Sc0000005:7875995..7878051+ Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL96685_cuf13 ID=transcript:BL96685_cuf13|Name=transcript:BL96685_cuf13|organism=Branchiostoma lanceolatum|type=mRNA|length=2057bp|location=Sequence derived from alignment at Sc0000005:7875995..7878051+ (Branchiostoma lanceolatum)
CCATTGTTTTTCTTACAGACATGTAACACAGTCCCCAGCATTGTTACTTT
AGATAAGGCTGTACTTTTACCCCGGAATCCGCCCTATTCCTGTTCCAGTC
AGTAGAATGTTTTGTAAAGACGGGACCAAAGGAGTGGAGCAAGAGTTTGG
TGGGTTTCAGGCTAACAGAGTTGTTCAGACAGAATGTGTGAGTGAGGGTG
TGAATAGGGTGGGTTTCAGGCTAACAGAGTGGTTTAGACAGAATGTGTGA
GTGAGAGTGTGAATAGGGTGGGTTCAAGACTTACCACAGGGCGGGTGGTT
TGTAGTGAATGTATGAAAAACTTAGGTCCTGGGATTTCAGGTGAATCCCG
TGGTCTGAGTTGAATCCTGTAGTTTGAGCCAAATGTGTAAAAGTGTGTTT
GCTCCTGGCAGACGTGCGACGCTGTGCGGAACGCTGGACTACCTTCCCCC
GGAGATGATCGAAGGGAAGATGCACGACGAGAAGGTGGACCTGTGGAGCC
TCGGCGTGCTGTGCTACGAGTTTCTGGTGGGCAAGCCGCCGTTCGAGGCA
GAAGGGCACAGCGAAACCTACAGAAGGATCTCAAAGGTAGGTAAAACTGC
TGGCGCCAAAAGGAACACTTGTTTGTCACAGATATAGGCTATTTATAACA
TCAGAACGCTCCAGACATGACATGGCAAAAATACAATAAAGAATGAAGTA
TGACATGTCATTGGCAGAGCACTGTGTGCTGTAAAGGTGGCATTTTGTTT
CTTGCTTTGGTAAAAGTGAGTGCAGCTGGACATTACCCATGGTGCATTGT
TCCCTGCAGGTCGACCTGAGATTTCCCCCCCATGTGACCTCCGGAGCCCG
AGATTTAATATCAAAGGTACAGTCATCATTAACTAATCATTAACTCTTTA
ATAAACAATGCAATATATACTATGTCAGGGTAGAGACTCTGATCGCCGAT
TTTACCGATAGAGATCCCGGTCAGAGTTTCTGTCGACAGTACAGTCACTG
ATTCTACCAGATCGAAGTCTCAACCCTGACATGTCGCATCTATGATGATG
GTATGTACCATATTCTATGTGTATAGTAGCTGTGGTTATAGTTATTTACA
GCTCCTGGGATGTAATATGACTTGCTTGTTGTTGTTTACAGGTCCTGCGA
TGTAATCTGACCTGCTTGTTGTTGTTTACAGCTCCTGCGGCACAACCCGA
TGCTTCGGTTGCCGTTGGACAGCGTTCTGACCCACCCATGGATTAAGGAC
CACGCCGCCACACAGGCCGAGTCCACACCCGCACACCCCACACACGCCTC
GCACACCAAGTCATGATCCCTCGTACAACCGCTCATCTAGGCTGTAGGGA
CAACTCACTTTAACTGCATGTACTACGGAACAGCAACAGGACACGACGGG
ACTTCGATTCATGTCGAAACGCTGTACACAAATCATGGGTTCAACTGGAT
AACTGAGTATCGGGACTTTCCCTCCCACCTTGTAAATTGAATGATGTAGA
ACCTGAGGTTTGTGAGTAGAGTAGACTTGAGGATATTGATACAGGTGTTA
GGGTGCCGCTGCATTAGTGGTTAATTAGCACTTCATGTACAAATTAATCA
ATAGAAGAGGATGACATATCTGTAATAAAAACTGTACAGTTGAACAGGAA
GGACTGGGGGAGTTTGATCAGGATTTGATACTGATGTACTAGTTTAATGT
ATTGTCTTTGATCTGTTGCCATGGTAACGGTTGCCATGTCGGGACACAAC
GCTGTCGCTCTGCTATCAGATTTCTCCTCAGGACCCTTTGGTTTGACTGG
TCCTCACGTGAAGACCTTGTCGGAGACTCGTCTCTGTACAGATATTGCAA
ACATAGGAGACTCGAGCCTTCCCTTTCTCAAGGATTTGTATTCCTCTGAA
GATTTCTTAGATAGAATCGGCTATTTCTATGTGATGTAAGATGTACCATT
TTATTGATTTCTATTTTAATCATTTTCTTTTGCATTCCTGTCATACTCAT
AGATTTCTTACCATTATGTATCAAGGAGAATAAAGATATCAACATTTTAC
TACTGAG Coding sequence (CDS) from alignment at Sc0000005:7875995..7878051+ >transcript:BL96685_cuf13 ID=transcript:BL96685_cuf13|Name=transcript:BL96685_cuf13|organism=Branchiostoma lanceolatum|type=CDS|length=1188bp|location=Sequence derived from alignment at Sc0000005:7875995..7878051+ (Branchiostoma lanceolatum)
ATGTGTAAAAGTGTGTTTGCTCCTGGCAGACGTGCGACGCTGTGCGGAAC
GCTGGACTACCTTCCCCCGGAGATGATCGAAGGGAAGATGCACGACGAGA
AGGTGGACCTGTGGAGCCTCGGCGTGCTGTGCTACGAGTTTCTGGTGGGC
AAGCCGCCGTTCGAGGCAGAAGGGCACAGCGAAACCTACAGAAGGATCTC
AAAGGTCGACCTGAGATTTCCCCCCCATGTGACCTCCGGAGCCCGAGATT
TAATATCAAAGCTCCTGCGGCACAACCCGATGCTTCGGTTGCCGTTGGAC
AGCGTTCTGACCCACCCATGGATTAAGGACCACGCCGCCACACAGGCCGA
GTCCACACCCGCACACCCCACACACGCCTCGCACACCAAGTCATGAATGT
GTAAAAGTGTGTTTGCTCCTGGCAGACGTGCGACGCTGTGCGGAACGCTG
GACTACCTTCCCCCGGAGATGATCGAAGGGAAGATGCACGACGAGAAGGT
GGACCTGTGGAGCCTCGGCGTGCTGTGCTACGAGTTTCTGGTGGGCAAGC
CGCCGTTCGAGGCAGAAGGGCACAGCGAAACCTACAGAAGGATCTCAAAG
GTCGACCTGAGATTTCCCCCCCATGTGACCTCCGGAGCCCGAGATTTAAT
ATCAAAGCTCCTGCGGCACAACCCGATGCTTCGGTTGCCGTTGGACAGCG
TTCTGACCCACCCATGGATTAAGGACCACGCCGCCACACAGGCCGAGTCC
ACACCCGCACACCCCACACACGCCTCGCACACCAAGTCATGAATGTGTAA
AAGTGTGTTTGCTCCTGGCAGACGTGCGACGCTGTGCGGAACGCTGGACT
ACCTTCCCCCGGAGATGATCGAAGGGAAGATGCACGACGAGAAGGTGGAC
CTGTGGAGCCTCGGCGTGCTGTGCTACGAGTTTCTGGTGGGCAAGCCGCC
GTTCGAGGCAGAAGGGCACAGCGAAACCTACAGAAGGATCTCAAAGGTCG
ACCTGAGATTTCCCCCCCATGTGACCTCCGGAGCCCGAGATTTAATATCA
AAGCTCCTGCGGCACAACCCGATGCTTCGGTTGCCGTTGGACAGCGTTCT
GACCCACCCATGGATTAAGGACCACGCCGCCACACAGGCCGAGTCCACAC
CCGCACACCCCACACACGCCTCGCACACCAAGTCATGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000005 | genome | Sc0000005:7875995..7878051 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL96685_cuf13 |
| Biotype | protein_coding |
|
