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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL96684_cuf2 >transcript:BL96684_cuf2-protein ID=transcript:BL96684_cuf2-protein|Name=transcript:BL96684_cuf2|organism=Branchiostoma lanceolatum|type=polypeptide|length=109bp
SIFLDFLAGVEVFRTQIKNPMALLEKENKEAPNVRIMVKGKNDTSQGAQR
VLKAQPSNHSTGQKPAATQQSSKAESSMDRRMKSWKLEDFDIGRPLGKGK
FGNVYLARE Run BLAST on NCBI mRNA from alignment at Sc0000005:7869815..7872436+ Legend: five_prime_UTRexonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL96684_cuf2 ID=transcript:BL96684_cuf2|Name=transcript:BL96684_cuf2|organism=Branchiostoma lanceolatum|type=mRNA|length=2622bp|location=Sequence derived from alignment at Sc0000005:7869815..7872436+ (Branchiostoma lanceolatum)
AATCCATTTTTCTTGACTTTCTCGCTGGAGTGGAGGTGTTTCGAACCCAG
GTAAGTGTTAAGGGACTATAAAATCTCAATTTGTGTTCGTTCTGATGTCC
CCCGCACAGGATAATTCCCTCAACCTTTTGATGTTGAAGACCCTCGCCTA
GTGCAAATAAATTATTTTGGTGAGCCTTTTTCTAGACATAATTTCTGCCT
TGCATGAACTGACCCACCGTCGCCCGGCTACAATAAGTATTCCTACATTT
AATGTGTTTTACCAGTGACTTCTATTCCCGTACTTACCAAGTTTCTAACT
CAAACTGAAGAAGTGACTGCCGGCCGTCCATGTTTTTTTGCCGTTGAACT
GAGGTCATTCATTATACATAATTTGAAAATCGTTTCTCTCCCTGATCGGC
GTAGTTCTTGCCAGATAGACTTGCTTATTCCTAATTGCAAATTTAGCAAC
GGTATGCCGCCAATCACTAGTATGCAGCAACCTTTACTAGTAGGTTTGTG
TCCTACCATCCCTCCCAAAATGATTTTGTGATGGCTGACAAAAAATTATC
TGGCCTCAACCACTGCAAGGAGGTTATATCCACCTAACCTCCTTGACCAC
TGGTAGTGGTCTGGACTTCTGAAACAAGCATTTCTTTAATCTTGTTGCTA
AAGCTTATATTAAATTATAACATTCCATTTTCCCCAGATATCCTGAACTG
AGCAAGCGTGCCAGTGAGCCAGCCAAGATGGTAAGTATGACCCAAATCAC
ATAAATTGAACCAACACCATTTTGAACCCCATGGGTTCACCCAGAAAAGC
GCTATAGGTGGCATATACCATTATAAAACCTCACCTTTTTGAACATGTGC
AGAACTTTATTTGTCTCTCAGACACATCTACATTTCGATACCCCCATATA
GCCCCACCAGGGGCAAAGTAGGGAGGGAGTTGAGGTCCCGGGCTAAGGCA
GGCAGACCCCCAGCCTGGCACGGACCGACTCAACGGTGAGAGCCGTCGCA
ACCGTGCCAGGCAGGGTATTTCATTGGGGAATAGTACGGGGGAAGTATGA
GTGTTTGTAAGTGTCGGTTCTGGCGTAGATGGTTTGAAACTTGAGGTGGT
GGCTCCACCGGGTGCGCCCATGAGCTGTCCCCTTTTTCACACAACAACTT
ACAAGTAATATAGTTACTAGCCTGGATGCCATCTGTTCAGGCCTCTCCGC
AGGCCAACTCCTCGGCTCCAGGCCACCACAGCTCCTGCCTTTCTCTAGAC
TAGAGCCTTGGAGCTGGCCTGTGTAGGGCCTGGAAACAGGCCGGGATGCA
GGCAATTTTGTAACCTGTTACGGAAACTTTCGAGTATCAAAGGTACATGT
AGCTGTGTAGGTGTAGCCAAAGACGTGTCAAATTCCACATTTGTGTTTCA
GATTAAGAATCCCATGGCACTGCTGGAGAAGGAGAATAAGGAGGCACCAA
ATGTTCGGGTCAGTTTTTTTAACTCGATACAATTCAACTTTTTTTTGAGC
TAACAGAAATGGTCACTACAGTACAGGTCTAAACTCTAATATATACGATA
AAGGTGATGTTTATTTTGTTTGCAACCATGGATGGCATGGGTTTAATGTT
ATGTTGTGTTTTAGAGCCTGGTGAAGGCTGAGATGTAATAATGTCGTGTT
GTGTTTGTACCATCTTTGTCTTGCCAGGGCTTCAGCCCTGTCTGTGTGTC
CTGAACAGCCGAAGCAATAAATAAGTAAATGTTGTGTTATGTTTAGATCA
TGGTGAAAGGGAAGAACGACACTTCCCAGGGAGCACAGCGTGTGCTGAAG
GCCCAGCCGTCCAATCACAGCACCGGGCAGAAACCCGCAGCCACGCAGCA
GTCAAGCAAGGCGGAGAGCAGTATGGACAGGTACATAGAGATTTACACAT
AATTTATGGACAGGTACATAGAGATTGCTACACATGATTAATGGACAGGT
ACATAGAGATTGCTACACATGATTTTGTGTGAGCATCTGTGTGTTTGTGT
CTGTTCTTGTGTGTGTGTGTGTGGCAGAAACCTGCAATACCGGTTCCAGT
TGCATGTGGTGAAGCACAAATAAGCAAGCATATTTACTTACTAAAATGGT
TGAGCTTCCGCTCGAACCAAGCTTGAAAGCACTCTCCACTTCACCCTATC
AAGCAAGCTTCTCGTTTTTCGATTAAACTGTTTTTAAACCTAAGGAAAGT
TTCTCTCCTGGTGCCTCATACTGTAAGCCTGCGCTCTACAGGCACCCTTG
GCTGATGGTAAATTGTGTAGGCTACCCAGCTAGCTAGGAGTAGAACAAAC
ATCACATAACTCAGTCACCCAAACTGCTATTTTACCGAAGCTGTATTTGG
GCTTTGAAAACCCCAGTAACATATGTGAGCATCAGTAATTATGGATTCTG
ACTTCTTGTGTGTGTGTGTGTATGTCCTATCTCTGTGTGCATGCATGCAC
ATGTGTACTCATGTGTGTCACTGTGTGTGTGTGTGTCTGTGCATGCATTA
CAAAGTAAAGATGTTTTGTTGGAATGTTTTTCAGGAGAATGAAGAGTTGG
AAGCTGGAAGACTTCGACATTGGCCGGCCGCTGGGCAAGGGGAAGTTTGG
AAACGTTTATCTGGCGAGAGAG Coding sequence (CDS) from alignment at Sc0000005:7869815..7872436+ >transcript:BL96684_cuf2 ID=transcript:BL96684_cuf2|Name=transcript:BL96684_cuf2|organism=Branchiostoma lanceolatum|type=CDS|length=1308bp|location=Sequence derived from alignment at Sc0000005:7869815..7872436+ (Branchiostoma lanceolatum)
TCCATTTTTCTTGACTTTCTCGCTGGAGTGGAGGTGTTTCGAACCCAGAT
TAAGAATCCCATGGCACTGCTGGAGAAGGAGAATAAGGAGGCACCAAATG
TTCGGATCATGGTGAAAGGGAAGAACGACACTTCCCAGGGAGCACAGCGT
GTGCTGAAGGCCCAGCCGTCCAATCACAGCACCGGGCAGAAACCCGCAGC
CACGCAGCAGTCAAGCAAGGCGGAGAGCAGTATGGACAGGAGAATGAAGA
GTTGGAAGCTGGAAGACTTCGACATTGGCCGGCCGCTGGGCAAGGGGAAG
TTTGGAAACGTTTATCTGGCGAGAGAGTCCATTTTTCTTGACTTTCTCGC
TGGAGTGGAGGTGTTTCGAACCCAGATTAAGAATCCCATGGCACTGCTGG
AGAAGGAGAATAAGGAGGCACCAAATGTTCGGATCATGGTGAAAGGGAAG
AACGACACTTCCCAGGGAGCACAGCGTGTGCTGAAGGCCCAGCCGTCCAA
TCACAGCACCGGGCAGAAACCCGCAGCCACGCAGCAGTCAAGCAAGGCGG
AGAGCAGTATGGACAGGAGAATGAAGAGTTGGAAGCTGGAAGACTTCGAC
ATTGGCCGGCCGCTGGGCAAGGGGAAGTTTGGAAACGTTTATCTGGCGAG
AGAGTCCATTTTTCTTGACTTTCTCGCTGGAGTGGAGGTGTTTCGAACCC
AGATTAAGAATCCCATGGCACTGCTGGAGAAGGAGAATAAGGAGGCACCA
AATGTTCGGATCATGGTGAAAGGGAAGAACGACACTTCCCAGGGAGCACA
GCGTGTGCTGAAGGCCCAGCCGTCCAATCACAGCACCGGGCAGAAACCCG
CAGCCACGCAGCAGTCAAGCAAGGCGGAGAGCAGTATGGACAGGAGAATG
AAGAGTTGGAAGCTGGAAGACTTCGACATTGGCCGGCCGCTGGGCAAGGG
GAAGTTTGGAAACGTTTATCTGGCGAGAGAGTCCATTTTTCTTGACTTTC
TCGCTGGAGTGGAGGTGTTTCGAACCCAGATTAAGAATCCCATGGCACTG
CTGGAGAAGGAGAATAAGGAGGCACCAAATGTTCGGATCATGGTGAAAGG
GAAGAACGACACTTCCCAGGGAGCACAGCGTGTGCTGAAGGCCCAGCCGT
CCAATCACAGCACCGGGCAGAAACCCGCAGCCACGCAGCAGTCAAGCAAG
GCGGAGAGCAGTATGGACAGGAGAATGAAGAGTTGGAAGCTGGAAGACTT
CGACATTGGCCGGCCGCTGGGCAAGGGGAAGTTTGGAAACGTTTATCTGG
CGAGAGAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000005 | genome | Sc0000005:7869815..7872436 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL96684_cuf2 |
| Biotype | protein_coding |
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