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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL96675_cuf4 >transcript:BL96675_cuf4-protein ID=transcript:BL96675_cuf4-protein|Name=transcript:BL96675_cuf4|organism=Branchiostoma lanceolatum|type=polypeptide|length=306bp
ELFTVTATDEDRGVNGEVSYRIVDDYGIFTVHQQNQSAQVWANRPLDREE
RDFYNLTLEASDGAVINSRTATATLEVWVDDVNDNPPKFVRDNFTTEEIY
LPQDTSVGTHVTRVNSTDEDVGTNAIPLYRIRSVLDMRLESPTDLFTINS
QTGDVNTSATFPNITEDYFVNVTLNVEDAMNSDLKLDFLTLRIVVPFIST
NRHPPRFPQAKYVVNRTREDLVGGTIDLITVSAEDDDTGPDGQIEYSILN
RDDTWYELLGFISLTGPNGTVSLSVNSKGTVLNRTDGYLHRILIQARDRG
QPARTG Run BLAST on NCBI mRNA from alignment at Sc0000005:7171316..7173799+ Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL96675_cuf4 ID=transcript:BL96675_cuf4|Name=transcript:BL96675_cuf4|organism=Branchiostoma lanceolatum|type=mRNA|length=2484bp|location=Sequence derived from alignment at Sc0000005:7171316..7173799+ (Branchiostoma lanceolatum)
GAACTGTTCACGGTCACGGCCACGGACGAGGACAGGGGAGTGAACGGGGA
AGTCTCCTATAGGATCGTGGATGATTACGGTACGGGCATGGGCTAAATAT
CTGTCATGAGATTAATGAAACTTGGTGCCTTTCATTCTGGAAAGTCATCA
TTCGATTCAATGCCGTTCTCTTCGTATTTGCATGATGCAGCGTTTGAACA
TTGAGATCAATTTCTTGTTTTTGTTTTATACCATTGCTAATATACTGCGA
AAATGATCAATTTCCCTTTTGAAGATGTATACCACTAGTGACCCTCTGAC
AATCTTAAGTAATAGAGATTATAATGATGTTTGCTTGTGTTTGTGTTCTG
CCAGGCATCTTCACAGTCCACCAACAGAACCAGTCCGCGCAGGTGTGGGC
GAACCGCCCGCTGGACCGCGAGGAGCGGGACTTCTACAACCTGACCCTGG
AGGCGTCTGACGGCGCCGTCATCAACTCCAGAACCGCGACGGCAACGCTG
GAAGTCTGGGTCGACGACGTGAACGACAATCCGCCCAAATTCGTCCGAGA
CAACTTCACAACGGAGGAGATCTATCTTCCACAGGTAGAGATTGTCTGCT
TACAGTTAAATGTACAATATCTAGCAAAATCATTAATAAGGAATAAAAAA
CATCTTCATAGTTAGCATACCAATTTCATTTGGTTGTTTGCCTTTGATAT
CTGGCTTCGGTTCCGTGTAAAATTGCAGGATACCTCCGTGGGAACCCACG
TGACCCGGGTGAACTCTACAGACGAGGATGTCGGGACAAACGCCATTCCG
CTGTACCGGATCAGGTCAGTCCTGGACATGCGCCTGGAAAGTCCGACTGA
TCTCTTCACTATCAACAGCCAAACCGGTGACGTCAACACTTCGGCCACAT
TTCCTAACATCACGGAGGACTACTTCGTCAATGTATGTGTCTATCAAATG
ATATGACCACCAATGTCAAAAATTGATTTATATGGATATGTGTGATGCTG
ATACTAGCTGTAAAGCATTTATTGTAGTTTGTATGGCGTATGCTTCTATG
TTTTATCTCCAGGGAGATTAGCTGCTTACAAATCTTGTATGGCAGCCGCT
GGACTAATCAAAGTATGCAAGTATCCAAGTATTGGCAGCCAGGCTTATAA
TTCTACAGCTATAGATGCAGTGAATAGCGTGTTGATTCCTATAAAACACA
AATGGATGATAAGAAAATTTTCTAAAAAGTATGAAAATGTAATACTTTTG
ATTTGAATAGTGACATTGTTTCCCAATGACCTTTGACCCAATATTTTTTT
GCCTTCCAGGTCACCCTGAATGTGGAAGATGCCATGAACTCTGACCTGAA
GCTGGATTTCCTGACCCTTCGCATCGTTGTTCCCTTCATCAGTACCAACA
GGCACCCGCCGCGATTTCCTCAAGGTATGACCGCAGACCAGTTGAAACGT
ACCGCACGTTTAAAGAGATGCATGTATCTGTCGGGCCAACTCCGCCAACA
TAACATAGAAAAGTGTCTATCCATATGAAGATAGCATGGCTATCTACGCA
TTGCAAAGTTGTCAAATATTCAATGAGCTGTGTGCATGTATGTTTATTAA
CGGCGTACCAGAAACTTGACACCAGATATTAGTCAGCTTTTAGGAAGTCT
GTGCGGCCCGACGAGGCTAGGGCAATGGACAGGACTGCCTGGAGGAGCCT
CCTGGTAAGCTATGGGCCAGTTTCTGGCCTGAGCACGTAGGCAGGTAGGC
AGGCTGTCCGACGACTCTGTAGAGTGATAGCTGGTTTACCTCCACGTTAT
ATTTGTTTGTTTCGACCCCTTTCTGTAGCAAAATACGTTGTGAACCGGAC
GCGGGAGGATCTGGTTGGGGGTACCATTGATTTGATCACCGTCTCAGCTG
AGGACGACGACACTGGGCCAGACGGGCAGATAGAGTACAGCATCCTGAAT
CGGGACGACACCTGGGTGTGTGGACTTTATTCTTATAACTCCTATCTTGT
CCGCATCGTCCCACATGTACAGGCCGGCGGGTCGCATGCGCAGCTTTCAT
CTAACAAACAGTGAATGTGGGGACTACCTCTCCGTTGAAACTCTGTCCTC
GTAAAAGTTCCAACGACTTGCCTGATTGCATTTGGTTTCGATGTCTCCAT
TGATGTTCTCAGTTCAGTTCAGTTCAGGTCGTCCTCATACGAGGTGCCAT
TCACAATGTCTAACCATGCATTTCTATCAAGCATGGCGGCTAGCAGGTTG
TAGTCCTTTAACCCAACCTCCTCCTCCATTGATGTTCTAAATGGTTGCAT
CTATCTTGAAACGCCTTTGTGTTATTTTCAGTACGAATTGCTCGGCTTCA
TTTCGTTAACGGGGCCCAACGGCACAGTCTCCCTTTCTGTGAACTCAAAG
GGAACCGTGTTGAACAGGACGGACGGCTATCTGCACCGCATCCTCATACA
GGCACGGGACAGGGGACAGCCTGCACGGACGGGG Coding sequence (CDS) from alignment at Sc0000005:7171316..7173799+ >transcript:BL96675_cuf4 ID=transcript:BL96675_cuf4|Name=transcript:BL96675_cuf4|organism=Branchiostoma lanceolatum|type=CDS|length=5508bp|location=Sequence derived from alignment at Sc0000005:7171316..7173799+ (Branchiostoma lanceolatum)
GAACTGTTCACGGTCACGGCCACGGACGAGGACAGGGGAGTGAACGGGGA
AGTCTCCTATAGGATCGTGGATGATTACGGCATCTTCACAGTCCACCAAC
AGAACCAGTCCGCGCAGGTGTGGGCGAACCGCCCGCTGGACCGCGAGGAG
CGGGACTTCTACAACCTGACCCTGGAGGCGTCTGACGGCGCCGTCATCAA
CTCCAGAACCGCGACGGCAACGCTGGAAGTCTGGGTCGACGACGTGAACG
ACAATCCGCCCAAATTCGTCCGAGACAACTTCACAACGGAGGAGATCTAT
CTTCCACAGGATACCTCCGTGGGAACCCACGTGACCCGGGTGAACTCTAC
AGACGAGGATGTCGGGACAAACGCCATTCCGCTGTACCGGATCAGGTCAG
TCCTGGACATGCGCCTGGAAAGTCCGACTGATCTCTTCACTATCAACAGC
CAAACCGGTGACGTCAACACTTCGGCCACATTTCCTAACATCACGGAGGA
CTACTTCGTCAATGTCACCCTGAATGTGGAAGATGCCATGAACTCTGACC
TGAAGCTGGATTTCCTGACCCTTCGCATCGTTGTTCCCTTCATCAGTACC
AACAGGCACCCGCCGCGATTTCCTCAAGCAAAATACGTTGTGAACCGGAC
GCGGGAGGATCTGGTTGGGGGTACCATTGATTTGATCACCGTCTCAGCTG
AGGACGACGACACTGGGCCAGACGGGCAGATAGAGTACAGCATCCTGAAT
CGGGACGACACCTGGTACGAATTGCTCGGCTTCATTTCGTTAACGGGGCC
CAACGGCACAGTCTCCCTTTCTGTGAACTCAAAGGGAACCGTGTTGAACA
GGACGGACGGCTATCTGCACCGCATCCTCATACAGGCACGGGACAGGGGA
CAGCCTGCACGGACGGGGGAACTGTTCACGGTCACGGCCACGGACGAGGA
CAGGGGAGTGAACGGGGAAGTCTCCTATAGGATCGTGGATGATTACGGCA
TCTTCACAGTCCACCAACAGAACCAGTCCGCGCAGGTGTGGGCGAACCGC
CCGCTGGACCGCGAGGAGCGGGACTTCTACAACCTGACCCTGGAGGCGTC
TGACGGCGCCGTCATCAACTCCAGAACCGCGACGGCAACGCTGGAAGTCT
GGGTCGACGACGTGAACGACAATCCGCCCAAATTCGTCCGAGACAACTTC
ACAACGGAGGAGATCTATCTTCCACAGGATACCTCCGTGGGAACCCACGT
GACCCGGGTGAACTCTACAGACGAGGATGTCGGGACAAACGCCATTCCGC
TGTACCGGATCAGGTCAGTCCTGGACATGCGCCTGGAAAGTCCGACTGAT
CTCTTCACTATCAACAGCCAAACCGGTGACGTCAACACTTCGGCCACATT
TCCTAACATCACGGAGGACTACTTCGTCAATGTCACCCTGAATGTGGAAG
ATGCCATGAACTCTGACCTGAAGCTGGATTTCCTGACCCTTCGCATCGTT
GTTCCCTTCATCAGTACCAACAGGCACCCGCCGCGATTTCCTCAAGCAAA
ATACGTTGTGAACCGGACGCGGGAGGATCTGGTTGGGGGTACCATTGATT
TGATCACCGTCTCAGCTGAGGACGACGACACTGGGCCAGACGGGCAGATA
GAGTACAGCATCCTGAATCGGGACGACACCTGGTACGAATTGCTCGGCTT
CATTTCGTTAACGGGGCCCAACGGCACAGTCTCCCTTTCTGTGAACTCAA
AGGGAACCGTGTTGAACAGGACGGACGGCTATCTGCACCGCATCCTCATA
CAGGCACGGGACAGGGGACAGCCTGCACGGACGGGGGAACTGTTCACGGT
CACGGCCACGGACGAGGACAGGGGAGTGAACGGGGAAGTCTCCTATAGGA
TCGTGGATGATTACGGCATCTTCACAGTCCACCAACAGAACCAGTCCGCG
CAGGTGTGGGCGAACCGCCCGCTGGACCGCGAGGAGCGGGACTTCTACAA
CCTGACCCTGGAGGCGTCTGACGGCGCCGTCATCAACTCCAGAACCGCGA
CGGCAACGCTGGAAGTCTGGGTCGACGACGTGAACGACAATCCGCCCAAA
TTCGTCCGAGACAACTTCACAACGGAGGAGATCTATCTTCCACAGGATAC
CTCCGTGGGAACCCACGTGACCCGGGTGAACTCTACAGACGAGGATGTCG
GGACAAACGCCATTCCGCTGTACCGGATCAGGTCAGTCCTGGACATGCGC
CTGGAAAGTCCGACTGATCTCTTCACTATCAACAGCCAAACCGGTGACGT
CAACACTTCGGCCACATTTCCTAACATCACGGAGGACTACTTCGTCAATG
TCACCCTGAATGTGGAAGATGCCATGAACTCTGACCTGAAGCTGGATTTC
CTGACCCTTCGCATCGTTGTTCCCTTCATCAGTACCAACAGGCACCCGCC
GCGATTTCCTCAAGCAAAATACGTTGTGAACCGGACGCGGGAGGATCTGG
TTGGGGGTACCATTGATTTGATCACCGTCTCAGCTGAGGACGACGACACT
GGGCCAGACGGGCAGATAGAGTACAGCATCCTGAATCGGGACGACACCTG
GTACGAATTGCTCGGCTTCATTTCGTTAACGGGGCCCAACGGCACAGTCT
CCCTTTCTGTGAACTCAAAGGGAACCGTGTTGAACAGGACGGACGGCTAT
CTGCACCGCATCCTCATACAGGCACGGGACAGGGGACAGCCTGCACGGAC
GGGGGAACTGTTCACGGTCACGGCCACGGACGAGGACAGGGGAGTGAACG
GGGAAGTCTCCTATAGGATCGTGGATGATTACGGCATCTTCACAGTCCAC
CAACAGAACCAGTCCGCGCAGGTGTGGGCGAACCGCCCGCTGGACCGCGA
GGAGCGGGACTTCTACAACCTGACCCTGGAGGCGTCTGACGGCGCCGTCA
TCAACTCCAGAACCGCGACGGCAACGCTGGAAGTCTGGGTCGACGACGTG
AACGACAATCCGCCCAAATTCGTCCGAGACAACTTCACAACGGAGGAGAT
CTATCTTCCACAGGATACCTCCGTGGGAACCCACGTGACCCGGGTGAACT
CTACAGACGAGGATGTCGGGACAAACGCCATTCCGCTGTACCGGATCAGG
TCAGTCCTGGACATGCGCCTGGAAAGTCCGACTGATCTCTTCACTATCAA
CAGCCAAACCGGTGACGTCAACACTTCGGCCACATTTCCTAACATCACGG
AGGACTACTTCGTCAATGTCACCCTGAATGTGGAAGATGCCATGAACTCT
GACCTGAAGCTGGATTTCCTGACCCTTCGCATCGTTGTTCCCTTCATCAG
TACCAACAGGCACCCGCCGCGATTTCCTCAAGCAAAATACGTTGTGAACC
GGACGCGGGAGGATCTGGTTGGGGGTACCATTGATTTGATCACCGTCTCA
GCTGAGGACGACGACACTGGGCCAGACGGGCAGATAGAGTACAGCATCCT
GAATCGGGACGACACCTGGTACGAATTGCTCGGCTTCATTTCGTTAACGG
GGCCCAACGGCACAGTCTCCCTTTCTGTGAACTCAAAGGGAACCGTGTTG
AACAGGACGGACGGCTATCTGCACCGCATCCTCATACAGGCACGGGACAG
GGGACAGCCTGCACGGACGGGGGAACTGTTCACGGTCACGGCCACGGACG
AGGACAGGGGAGTGAACGGGGAAGTCTCCTATAGGATCGTGGATGATTAC
GGCATCTTCACAGTCCACCAACAGAACCAGTCCGCGCAGGTGTGGGCGAA
CCGCCCGCTGGACCGCGAGGAGCGGGACTTCTACAACCTGACCCTGGAGG
CGTCTGACGGCGCCGTCATCAACTCCAGAACCGCGACGGCAACGCTGGAA
GTCTGGGTCGACGACGTGAACGACAATCCGCCCAAATTCGTCCGAGACAA
CTTCACAACGGAGGAGATCTATCTTCCACAGGATACCTCCGTGGGAACCC
ACGTGACCCGGGTGAACTCTACAGACGAGGATGTCGGGACAAACGCCATT
CCGCTGTACCGGATCAGGTCAGTCCTGGACATGCGCCTGGAAAGTCCGAC
TGATCTCTTCACTATCAACAGCCAAACCGGTGACGTCAACACTTCGGCCA
CATTTCCTAACATCACGGAGGACTACTTCGTCAATGTCACCCTGAATGTG
GAAGATGCCATGAACTCTGACCTGAAGCTGGATTTCCTGACCCTTCGCAT
CGTTGTTCCCTTCATCAGTACCAACAGGCACCCGCCGCGATTTCCTCAAG
CAAAATACGTTGTGAACCGGACGCGGGAGGATCTGGTTGGGGGTACCATT
GATTTGATCACCGTCTCAGCTGAGGACGACGACACTGGGCCAGACGGGCA
GATAGAGTACAGCATCCTGAATCGGGACGACACCTGGTACGAATTGCTCG
GCTTCATTTCGTTAACGGGGCCCAACGGCACAGTCTCCCTTTCTGTGAAC
TCAAAGGGAACCGTGTTGAACAGGACGGACGGCTATCTGCACCGCATCCT
CATACAGGCACGGGACAGGGGACAGCCTGCACGGACGGGGGAACTGTTCA
CGGTCACGGCCACGGACGAGGACAGGGGAGTGAACGGGGAAGTCTCCTAT
AGGATCGTGGATGATTACGGCATCTTCACAGTCCACCAACAGAACCAGTC
CGCGCAGGTGTGGGCGAACCGCCCGCTGGACCGCGAGGAGCGGGACTTCT
ACAACCTGACCCTGGAGGCGTCTGACGGCGCCGTCATCAACTCCAGAACC
GCGACGGCAACGCTGGAAGTCTGGGTCGACGACGTGAACGACAATCCGCC
CAAATTCGTCCGAGACAACTTCACAACGGAGGAGATCTATCTTCCACAGG
ATACCTCCGTGGGAACCCACGTGACCCGGGTGAACTCTACAGACGAGGAT
GTCGGGACAAACGCCATTCCGCTGTACCGGATCAGGTCAGTCCTGGACAT
GCGCCTGGAAAGTCCGACTGATCTCTTCACTATCAACAGCCAAACCGGTG
ACGTCAACACTTCGGCCACATTTCCTAACATCACGGAGGACTACTTCGTC
AATGTCACCCTGAATGTGGAAGATGCCATGAACTCTGACCTGAAGCTGGA
TTTCCTGACCCTTCGCATCGTTGTTCCCTTCATCAGTACCAACAGGCACC
CGCCGCGATTTCCTCAAGCAAAATACGTTGTGAACCGGACGCGGGAGGAT
CTGGTTGGGGGTACCATTGATTTGATCACCGTCTCAGCTGAGGACGACGA
CACTGGGCCAGACGGGCAGATAGAGTACAGCATCCTGAATCGGGACGACA
CCTGGTACGAATTGCTCGGCTTCATTTCGTTAACGGGGCCCAACGGCACA
GTCTCCCTTTCTGTGAACTCAAAGGGAACCGTGTTGAACAGGACGGACGG
CTATCTGCACCGCATCCTCATACAGGCACGGGACAGGGGACAGCCTGCAC
GGACGGGG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
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| Sc0000005 | genome | Sc0000005:7171316..7173799 + |
Properties
| Property Name | Value |
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| Transcript id | BL96675_cuf4 |
| Biotype | protein_coding |
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