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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL96672_cuf0 >transcript:BL96672_cuf0-protein ID=transcript:BL96672_cuf0-protein|Name=transcript:BL96672_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=204bp
FSIDPSSGVITPNGPLDREERDTLVFRVAMATRYDVTFGTVTVAVTDIND
NSPTVVESWSSEYILQSTPINSIVGLVRAEDPDAGENAILTYTIVEEAGE
DFSELFFINNVTGVITVISNFKVIRENIVLKIKVLDNGEPPKVAETTIEL
SLLSNDAVGNLTRLNVSVPEDVAIGTALVNATVPASAGDGTITYTYVMQD
PSGL Run BLAST on NCBI mRNA from alignment at Sc0000005:7161566..7163002+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL96672_cuf0 ID=transcript:BL96672_cuf0|Name=transcript:BL96672_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=1437bp|location=Sequence derived from alignment at Sc0000005:7161566..7163002+ (Branchiostoma lanceolatum)
GTTCTCCATCGACCCTTCCAGCGGAGTCATAACCCCCAACGGTCCACTGG
ACAGGGAGGAGAGGGACACTCTGGTCTTCAGGGTCGCCATGGCTACCAGG
TGATCTTCCTTTGCAACTATTACTTCATTTTCTTCTACTGTAAATGCCTA
AGTCGAATTAAGAAGGTGGGAATTACTTGGAGAAGTTTCCATTACCGACC
ATACCAAAATTCGACAAAATATTTGTTGTCAGCCCACCCCACCGCACTCC
ACCACACACATACACACTACATGTATATGGGCGTATCTACTACTTACAAC
ATCTTATGGCACTTATTCCTACACTGTTCCGTCATCAACCCAGGTATGAC
GTCACCTTCGGCACCGTGACCGTGGCCGTGACGGACATTAACGACAACTC
CCCGACCGTCGTGGAAAGTTGGAGCAGTGAATACATCCTGCAGTCCACCC
CCATCAACTCCATAGTTGGACTGGTCCGAGCCGAGGACCCGGATGCGGGG
GAGAACGCGATCTTGACCTACACCATTGTGGAGGAGGCTGGCGAAGATTT
TTCTGAGCTGTTCTTTATCAACAACGTCACGGGGGTCATTACGGTCATCA
GCAACTTCAAGGTCATCAGAGAGAACATCGTTCTCAAGGTGATGTCCTGA
ATCATGAAAACTTTGTCTCGAAACACGTCACGATGACAAAGCACATTTGC
ATATTGCTTGATGACGTGCCTTGCGCTGTTAATGGCTATGCTAAGTTCGT
CAGAATGTTAAAGAAAATAATATAGCCCTCTGTTATTGACAATGCTCGCG
TATGCAAAAATTGAAACATTTTTGTGACTTGGCTTCGTTTCTAGAGCACT
TAACGGTGGACCGTAGCGACTGGAGGAAGAGGGTTGACTTAGTCCGGGCA
ACCCGCCCGACATGATGATGATGATGGCTTCGTTTAACTAATTACAAATC
AAGAGAAGTTATTATCCTTAACTTGGAACAAAAACCAGAACGCATTTCCC
CCATTAGATCAAGGTGCTGGACAATGGCGAACCACCGAAGGTTGCGGAAA
CGACTATTGAACTGTCTCTCCTGTCAAATGACGCGGTCGGAAACCTGACA
AGACTGAACGTCAGCGTTCCAGAGGACGTCGCGATCGGTATGCATTTCCC
GTCTTTGTGCATGCGCACATTTCTCAAGTTTTATAATGATGTTATCTGAC
TATCATCAGTATTTGGCACTGAACCGTCTTTTCTGCTGTACGGAGACTTT
TTGTGGCCGTAGATGTGTTACATATTTTCCCAAAAAAATATCGATGCAAA
TTCATATTTTGTCTCGATTGATCCGCGAAGTCGCCTGTGCCCCCAGGAAC
CGCCCTCGTGAACGCCACGGTCCCGGCGAGCGCGGGAGACGGGACCATCA
CCTACACTTACGTCATGCAGGACCCGTCAGGCCTCAA Coding sequence (CDS) from alignment at Sc0000005:7161566..7163002+ >transcript:BL96672_cuf0 ID=transcript:BL96672_cuf0|Name=transcript:BL96672_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=2448bp|location=Sequence derived from alignment at Sc0000005:7161566..7163002+ (Branchiostoma lanceolatum)
TTCTCCATCGACCCTTCCAGCGGAGTCATAACCCCCAACGGTCCACTGGA
CAGGGAGGAGAGGGACACTCTGGTCTTCAGGGTCGCCATGGCTACCAGGT
ATGACGTCACCTTCGGCACCGTGACCGTGGCCGTGACGGACATTAACGAC
AACTCCCCGACCGTCGTGGAAAGTTGGAGCAGTGAATACATCCTGCAGTC
CACCCCCATCAACTCCATAGTTGGACTGGTCCGAGCCGAGGACCCGGATG
CGGGGGAGAACGCGATCTTGACCTACACCATTGTGGAGGAGGCTGGCGAA
GATTTTTCTGAGCTGTTCTTTATCAACAACGTCACGGGGGTCATTACGGT
CATCAGCAACTTCAAGGTCATCAGAGAGAACATCGTTCTCAAGATCAAGG
TGCTGGACAATGGCGAACCACCGAAGGTTGCGGAAACGACTATTGAACTG
TCTCTCCTGTCAAATGACGCGGTCGGAAACCTGACAAGACTGAACGTCAG
CGTTCCAGAGGACGTCGCGATCGGAACCGCCCTCGTGAACGCCACGGTCC
CGGCGAGCGCGGGAGACGGGACCATCACCTACACTTACGTCATGCAGGAC
CCGTCAGGCCTCTTCTCCATCGACCCTTCCAGCGGAGTCATAACCCCCAA
CGGTCCACTGGACAGGGAGGAGAGGGACACTCTGGTCTTCAGGGTCGCCA
TGGCTACCAGGTATGACGTCACCTTCGGCACCGTGACCGTGGCCGTGACG
GACATTAACGACAACTCCCCGACCGTCGTGGAAAGTTGGAGCAGTGAATA
CATCCTGCAGTCCACCCCCATCAACTCCATAGTTGGACTGGTCCGAGCCG
AGGACCCGGATGCGGGGGAGAACGCGATCTTGACCTACACCATTGTGGAG
GAGGCTGGCGAAGATTTTTCTGAGCTGTTCTTTATCAACAACGTCACGGG
GGTCATTACGGTCATCAGCAACTTCAAGGTCATCAGAGAGAACATCGTTC
TCAAGATCAAGGTGCTGGACAATGGCGAACCACCGAAGGTTGCGGAAACG
ACTATTGAACTGTCTCTCCTGTCAAATGACGCGGTCGGAAACCTGACAAG
ACTGAACGTCAGCGTTCCAGAGGACGTCGCGATCGGAACCGCCCTCGTGA
ACGCCACGGTCCCGGCGAGCGCGGGAGACGGGACCATCACCTACACTTAC
GTCATGCAGGACCCGTCAGGCCTCTTCTCCATCGACCCTTCCAGCGGAGT
CATAACCCCCAACGGTCCACTGGACAGGGAGGAGAGGGACACTCTGGTCT
TCAGGGTCGCCATGGCTACCAGGTATGACGTCACCTTCGGCACCGTGACC
GTGGCCGTGACGGACATTAACGACAACTCCCCGACCGTCGTGGAAAGTTG
GAGCAGTGAATACATCCTGCAGTCCACCCCCATCAACTCCATAGTTGGAC
TGGTCCGAGCCGAGGACCCGGATGCGGGGGAGAACGCGATCTTGACCTAC
ACCATTGTGGAGGAGGCTGGCGAAGATTTTTCTGAGCTGTTCTTTATCAA
CAACGTCACGGGGGTCATTACGGTCATCAGCAACTTCAAGGTCATCAGAG
AGAACATCGTTCTCAAGATCAAGGTGCTGGACAATGGCGAACCACCGAAG
GTTGCGGAAACGACTATTGAACTGTCTCTCCTGTCAAATGACGCGGTCGG
AAACCTGACAAGACTGAACGTCAGCGTTCCAGAGGACGTCGCGATCGGAA
CCGCCCTCGTGAACGCCACGGTCCCGGCGAGCGCGGGAGACGGGACCATC
ACCTACACTTACGTCATGCAGGACCCGTCAGGCCTCTTCTCCATCGACCC
TTCCAGCGGAGTCATAACCCCCAACGGTCCACTGGACAGGGAGGAGAGGG
ACACTCTGGTCTTCAGGGTCGCCATGGCTACCAGGTATGACGTCACCTTC
GGCACCGTGACCGTGGCCGTGACGGACATTAACGACAACTCCCCGACCGT
CGTGGAAAGTTGGAGCAGTGAATACATCCTGCAGTCCACCCCCATCAACT
CCATAGTTGGACTGGTCCGAGCCGAGGACCCGGATGCGGGGGAGAACGCG
ATCTTGACCTACACCATTGTGGAGGAGGCTGGCGAAGATTTTTCTGAGCT
GTTCTTTATCAACAACGTCACGGGGGTCATTACGGTCATCAGCAACTTCA
AGGTCATCAGAGAGAACATCGTTCTCAAGATCAAGGTGCTGGACAATGGC
GAACCACCGAAGGTTGCGGAAACGACTATTGAACTGTCTCTCCTGTCAAA
TGACGCGGTCGGAAACCTGACAAGACTGAACGTCAGCGTTCCAGAGGACG
TCGCGATCGGAACCGCCCTCGTGAACGCCACGGTCCCGGCGAGCGCGGGA
GACGGGACCATCACCTACACTTACGTCATGCAGGACCCGTCAGGCCTC
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000005 | genome | Sc0000005:7161566..7163002 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL96672_cuf0 |
| Biotype | protein_coding |
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