|
|
Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL96655_cuf9 >transcript:BL96655_cuf9-protein ID=transcript:BL96655_cuf9-protein|Name=transcript:BL96655_cuf9|organism=Branchiostoma lanceolatum|type=polypeptide|length=133bp
HMTDRPDDTVHGDTYKCAAGYFCGRGSNTSQPLNETFGDICPTGHYCPLG
SSAAQPCAAGTFANETGQASCEQCPEGFYCESGTSIPGSCPAGYYCPAGT
DSEFKNPCLPGRYNNLTERTAVSACLSCPPGSY Run BLAST on NCBI mRNA from alignment at Sc0000005:7267467..7269684+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL96655_cuf9 ID=transcript:BL96655_cuf9|Name=transcript:BL96655_cuf9|organism=Branchiostoma lanceolatum|type=mRNA|length=2218bp|location=Sequence derived from alignment at Sc0000005:7267467..7269684+ (Branchiostoma lanceolatum)
TCACATGACCGACAGACCCGACGACACCGTCCACGGCGACACGTACAAGT
GTGCCGCGGGCTACTTCTGCGGCCGCGGGTCAAACACCTCACAACCGCTC
AACGAGACCTTTGGGGACATCTGTCCAACCGGTGGGTGGATTCTCCTAAA
GTTTGCGGTCGATGTGGCTTTAGTTTATTTTCATCTTCAAAATCTGGGTT
TGGCTGATATTACAAAAGATCCTAGTTCAAGTTCACTGTTGCTTAATGAG
ATAATTTGGCATCTGTTAAACTGGTGTGTGAAAAGTTCACAATCAAATTT
AGCTGAATTTTTTGTTTTATAAGTCGCAACAATAAGTGGTTATGAATGTT
TGCACAAAACTGACAGGATAATGATGTGTTAAACTATTTTATTCTATTTC
ATTGGATTGACTCACATACAGAGCAGCCTACTAAGCTATCCAAACAATAC
TCAGTTTTGAAGTGTATCATGGGTTTGGGGTACCATTTTGCAACACCTCT
CCATGTATCATATGTATATAATTTTCAACTCAGATGATGGTCATGAAATA
AAATCACTGCAGTCCCCGGTGTTGACATTGTTCCTGATATTCCATTGCAG
GCCACTACTGTCCGCTGGGGTCGTCTGCAGCACAGCCGTGTGCAGCGGGC
ACGTTCGCTAACGAGACGGGGCAGGCCTCCTGTGAGCAGTGTCCGGAGGT
TGGGCTGGGCTTCATTATCAATCTGTGGTAGCATTGCCTGCATGAAATAT
GTGCTAAGCAACGTTTCTATAGTAGTCTAAGAAGTTTACAGATGCGAGAT
GGAAAAGCAGTTCAGCAGACTTTAAGTTGTTGTAAACACCCTTCTATTGC
CATTCTGTGTGCTACTGCCCTGCAGGTCTTACACAAGTTGACAGGTGGCG
CTTGTGCGCTACAGGGGTTCTATTGTGAGAGTGGCATGTCCATATGCGAC
TCATGCCTGACTGTAGTTCTTACATGAGTTGATAGATGGCGCTTGTGTGT
TACAGGGGTTCTACTGCGAGAGCGGCACGTCCATACCGGGCTCATGCCCG
ACTGTAGTTCTTACATAAGTTGATAGATGGTGCTCATGCCCGACTGTAGT
TTTTACATGAGTTGATAGATGGCGCTTGTGTGTTACAGGGGTTCTACTGC
AAGAGTGGCACGTCCATACACGGCTCATGCCTGACTGTAGTTCTTACATG
AGTTGATAGATGCCGCTTGTGTGTTACAGGGGTTCTACTGCGAGAGTGCC
AAGTCCATATGCAGCTCATGCCTGGCTGTAGTTCTTACATGAGTTGATAG
ATGGCGCTTGTGTGTTACAGGGGTTCTACTGCGAGAGCGGCACGTCCATA
CCGGGCTCATGCCCTTTTACTTAACGCTGTAGTTCTTACCTGAGTTGATA
GGTGGCGCTTGTGTGTTACAGGGGTTCTACTGCGAGAGCGGCACGTCCAT
ACCGGGCTCCTGCCCTGCCGGGTACTACTGCCCGGCCGGCACCGACAGCG
AGTTCAAGAACCCGTGTCTGCCGGGCCGGTACAACAACCTGACGGAGAGA
ACAGCTGTGTCAGCATGCCTCTCCTGTCCTCCTGGGTAGGTCTACTAACT
CGTTCTGTTCGATTTATTTCAAATTTTGTGTATCTGTATAGCCGGTATAA
CCGCCCTTTGGCGTAACACACCAGCTTCGCAGGCATGCAGGCAGCAGGTA
TGTGTCATTTGGTTTCAAGATTAAAAGTCCTGGCAGTGAATTGTGCGTAA
ATCACAGTGTATAGTTCAATGTAAAAAGACTAAGCTTCCCCTGCCTTTTT
TAGCTCCTAGAGAATTTTGATCCAGGCTAGATCTGGATCTGTTAGAATCT
GTTAGAATATGCTTTCTATAAGCGTAAAGGCATTTGTCAGTCAGCTAGTG
TGTATAGTTCAGTATAAGAAGACTAAAGACACCCCTTCCTTACAGCTCCT
ACTGCCAGACCCCAGGCCTGTCCCGGCCCATAGGCGCCTGCGATCCCGGC
TGGTTCTGTTAGAACACTTGTATGTGTGTACTAGTTATATATACATGTGA
GAAGACTAAGACACCCCTGCCTTACAGCTCCTACTGCCAGACCCCAGGCC
TGTCCCGGCCCACAGGCGGCTGCGATCCCGGCTGGTTCTGTTAGAACACT
TGTATGTGTGTACTAGTTATATATACATGTGAGAAGACTAAGACACCCCT
GCCTTACAGCTCGTACTG Coding sequence (CDS) from alignment at Sc0000005:7267467..7269684+ >transcript:BL96655_cuf9 ID=transcript:BL96655_cuf9|Name=transcript:BL96655_cuf9|organism=Branchiostoma lanceolatum|type=CDS|length=1596bp|location=Sequence derived from alignment at Sc0000005:7267467..7269684+ (Branchiostoma lanceolatum)
CACATGACCGACAGACCCGACGACACCGTCCACGGCGACACGTACAAGTG
TGCCGCGGGCTACTTCTGCGGCCGCGGGTCAAACACCTCACAACCGCTCA
ACGAGACCTTTGGGGACATCTGTCCAACCGGCCACTACTGTCCGCTGGGG
TCGTCTGCAGCACAGCCGTGTGCAGCGGGCACGTTCGCTAACGAGACGGG
GCAGGCCTCCTGTGAGCAGTGTCCGGAGGGGTTCTACTGCGAGAGCGGCA
CGTCCATACCGGGCTCCTGCCCTGCCGGGTACTACTGCCCGGCCGGCACC
GACAGCGAGTTCAAGAACCCGTGTCTGCCGGGCCGGTACAACAACCTGAC
GGAGAGAACAGCTGTGTCAGCATGCCTCTCCTGTCCTCCTGGCTCGTACC
ACATGACCGACAGACCCGACGACACCGTCCACGGCGACACGTACAAGTGT
GCCGCGGGCTACTTCTGCGGCCGCGGGTCAAACACCTCACAACCGCTCAA
CGAGACCTTTGGGGACATCTGTCCAACCGGCCACTACTGTCCGCTGGGGT
CGTCTGCAGCACAGCCGTGTGCAGCGGGCACGTTCGCTAACGAGACGGGG
CAGGCCTCCTGTGAGCAGTGTCCGGAGGGGTTCTACTGCGAGAGCGGCAC
GTCCATACCGGGCTCCTGCCCTGCCGGGTACTACTGCCCGGCCGGCACCG
ACAGCGAGTTCAAGAACCCGTGTCTGCCGGGCCGGTACAACAACCTGACG
GAGAGAACAGCTGTGTCAGCATGCCTCTCCTGTCCTCCTGGCTCGTACCA
CATGACCGACAGACCCGACGACACCGTCCACGGCGACACGTACAAGTGTG
CCGCGGGCTACTTCTGCGGCCGCGGGTCAAACACCTCACAACCGCTCAAC
GAGACCTTTGGGGACATCTGTCCAACCGGCCACTACTGTCCGCTGGGGTC
GTCTGCAGCACAGCCGTGTGCAGCGGGCACGTTCGCTAACGAGACGGGGC
AGGCCTCCTGTGAGCAGTGTCCGGAGGGGTTCTACTGCGAGAGCGGCACG
TCCATACCGGGCTCCTGCCCTGCCGGGTACTACTGCCCGGCCGGCACCGA
CAGCGAGTTCAAGAACCCGTGTCTGCCGGGCCGGTACAACAACCTGACGG
AGAGAACAGCTGTGTCAGCATGCCTCTCCTGTCCTCCTGGCTCGTACCAC
ATGACCGACAGACCCGACGACACCGTCCACGGCGACACGTACAAGTGTGC
CGCGGGCTACTTCTGCGGCCGCGGGTCAAACACCTCACAACCGCTCAACG
AGACCTTTGGGGACATCTGTCCAACCGGCCACTACTGTCCGCTGGGGTCG
TCTGCAGCACAGCCGTGTGCAGCGGGCACGTTCGCTAACGAGACGGGGCA
GGCCTCCTGTGAGCAGTGTCCGGAGGGGTTCTACTGCGAGAGCGGCACGT
CCATACCGGGCTCCTGCCCTGCCGGGTACTACTGCCCGGCCGGCACCGAC
AGCGAGTTCAAGAACCCGTGTCTGCCGGGCCGGTACAACAACCTGACGGA
GAGAACAGCTGTGTCAGCATGCCTCTCCTGTCCTCCTGGCTCGTAC
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000005 | genome | Sc0000005:7267467..7269684 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL96655_cuf9 |
| Biotype | protein_coding |
|
