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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL96640_cuf0 >transcript:BL96640_cuf0-protein ID=transcript:BL96640_cuf0-protein|Name=transcript:BL96640_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=102bp
FLSLPTTVRIEETTATGTVIYNLLNAAFDQDVGQTLTYTINPASTEFAIS
GTSVETLVALDYDTAPISYELVIEVADDGGGPLTATSTLTVSLVDVNDES
PT Run BLAST on NCBI mRNA from alignment at Sc0000190:161151..163276+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL96640_cuf0 ID=transcript:BL96640_cuf0|Name=transcript:BL96640_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=2126bp|location=Sequence derived from alignment at Sc0000190:161151..163276+ (Branchiostoma lanceolatum)
GTTCCTGTCCCTGCCCACAACGGTGCGTATCGAGGAAACCACGGCTACAG
GAACGGTCATCTACAACCTGCTGAATGCAGCGTTCGACCAAGATGTCGGA
CAGACTTTGACATACACAATTAGTAAGTTTCTAGTAACATTTTATGTTTT
TACGCTATTCGTCAACAGGTGGTCAAATAGGTTCTTTCATGTTTAAAAAC
GAAATGCTATTGTAGACATCCTATGGTGAGTTCCTACATAATGCGGTAAT
TTTGGGATAGCACAAAACAAAATTATAGATTAAACCAACATCTACATACT
GCTGAGTGCAGCGTATGACCAAGGTTTTGGACGGTTGTTGAAGTACACAA
TAAATGACTTTTTATCTTTTTATGCTATTCGTCTAGAATATGATCAGATA
GATGGTCCATGGAACAGCTGATGGCATTTAACCCTCAAACACCCGTACGT
TTCCCGACTAAAATGACCGAACGGGGTCAAAAAGCCCCAAAATGTTTTGT
TCAGTATCTCCCTTTTCAATTTTTTTCGCTGACTGTTATCCATACATTGC
TCCATGAATGAAAGAAAGATGTTTTGGCATGTTCAGGTATGAATAATTCC
CGTTCATTATCATAATTTATGGAAAAAGATTAGAAGGACCACGTTTTGAA
CAATCCCTGTTTAGACTGGGAGGGGATTTTTAAGGTCAACTCCAAATTTA
ATGTTGCATAACTCCTGAACGGCTTACTACAAACTTGATGACTTTTCATA
AAATGTCCTTAACAAAGATTTCAAATTAATAAAGCAAGTTCATCGTTTTT
CTGGTGTTGCCACGGCAACGGGTTTTTAACAGGCTTATTTTACAAATTCT
GCTAATTTCAGTTCAAACAATGACGTTTCGAGGCTTTGTTGGTACACCAT
ATTTATCTTCTTACATTGTTATCATCTTGTGTAATTTAATATAACTTTCA
TGATTTAACATTATTATTTTATGCTGATATGATGACGTAATCGGTCAAAA
TCCAAGATGGCGGATAGAATCACGTAAAATACGTCATAATGACGTCATAT
TACGCCATAACGTTGTGGTATTATTGATTCACATGTGCATTATCTTATGG
TGGTTATACAATAAGTAGTTTAGGAGTTACAGAGGGCAGGTCTCAAAAAC
AGCACATTATTTTTGATGGGGTCAAAAATGACCCCAGTCAGACTCAGCAG
ATTTTTTTTCCGATCAAACATCAAACATCAGATTAATTCGCACATCAAAG
TCCACGTCTGGGGTAAAAAAATGACCCCGTTCGGGTGTTTGAGGGTTAAG
GAGCTTTAATATTAACATGTTACAATTTATGGCAGGACAGTTTCGGGCTG
GTCAAGACGAAAGTTTTACACAGTTACCGACAAACTTGAGGTCAGCGTCA
GTGGCTTGCCCATATATTTGTAATGTCTTAAAATACTTGAAATTCCGGTA
CAGTGCCAAGAGTGGACGACGAGAGCCTGAGAGGCAAATCAAGGAACAAC
ATCCGTAATCAACGTTGGCTCTTAGCTATATAGTTGATTACCATCTTTCA
TCGCTCCGTAGCAAATTGAAGACGGTAGAGCTAGTCACACGTTTAACATT
AAAAACTAACATATACATGTAACTCCTATATATTTGCAGATCCTGCCAGT
ACGGAGTTTGCTATTTCCGGAACGAGCGTCGAGACTTTGGTCGCCTTGGA
CTACGACACTGCACCAATATCGTACGAGCTCGTCATCGAGTAAGTCCCAA
TCCGTGGTTTTTCTCCATGCACAATGTTGTTAAGTCATTGATGAGCTGAA
CCTGAAAATATATATAACTCGTAACTCGAGAAGTCATGGTGATTAATCCA
GTGTATTGAAAACCATATAGTATATTGGAGAAAGCACATACAACCTAAAA
TTTACAAAGACGAGTTTATACATATACGTATGATATACTAACAGTTGTAA
ATGTTCTCAACAGCTCAAGTAGATAGTGTGGTTGGAGGGGGATCATAAAA
AATGTTCGTATGGAATTCTTCAACTGCCGATTTTTTCCAGGGTGGCCGAT
GATGGAGGTGGACCTCTTACTGCCACGTCCACGCTGACGGTCTCACTAGT
GGACGTAAATGATGAATCGCCAACTT Coding sequence (CDS) from alignment at Sc0000190:161151..163276+ >transcript:BL96640_cuf0 ID=transcript:BL96640_cuf0|Name=transcript:BL96640_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=918bp|location=Sequence derived from alignment at Sc0000190:161151..163276+ (Branchiostoma lanceolatum)
TTCCTGTCCCTGCCCACAACGGTGCGTATCGAGGAAACCACGGCTACAGG
AACGGTCATCTACAACCTGCTGAATGCAGCGTTCGACCAAGATGTCGGAC
AGACTTTGACATACACAATTAATCCTGCCAGTACGGAGTTTGCTATTTCC
GGAACGAGCGTCGAGACTTTGGTCGCCTTGGACTACGACACTGCACCAAT
ATCGTACGAGCTCGTCATCGAGGTGGCCGATGATGGAGGTGGACCTCTTA
CTGCCACGTCCACGCTGACGGTCTCACTAGTGGACGTAAATGATGAATCG
CCAACTTTCCTGTCCCTGCCCACAACGGTGCGTATCGAGGAAACCACGGC
TACAGGAACGGTCATCTACAACCTGCTGAATGCAGCGTTCGACCAAGATG
TCGGACAGACTTTGACATACACAATTAATCCTGCCAGTACGGAGTTTGCT
ATTTCCGGAACGAGCGTCGAGACTTTGGTCGCCTTGGACTACGACACTGC
ACCAATATCGTACGAGCTCGTCATCGAGGTGGCCGATGATGGAGGTGGAC
CTCTTACTGCCACGTCCACGCTGACGGTCTCACTAGTGGACGTAAATGAT
GAATCGCCAACTTTCCTGTCCCTGCCCACAACGGTGCGTATCGAGGAAAC
CACGGCTACAGGAACGGTCATCTACAACCTGCTGAATGCAGCGTTCGACC
AAGATGTCGGACAGACTTTGACATACACAATTAATCCTGCCAGTACGGAG
TTTGCTATTTCCGGAACGAGCGTCGAGACTTTGGTCGCCTTGGACTACGA
CACTGCACCAATATCGTACGAGCTCGTCATCGAGGTGGCCGATGATGGAG
GTGGACCTCTTACTGCCACGTCCACGCTGACGGTCTCACTAGTGGACGTA
AATGATGAATCGCCAACT
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000190 | genome | Sc0000190:161151..163276 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL96640_cuf0 |
| Biotype | protein_coding |
|
