transcript:BL96629_cuf5 (mRNA) - B. lanceolatum

Overview
Nametranscript:BL96629_cuf5
Unique Nametranscript:BL96629_cuf5
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

protein sequence of transcript:BL96629_cuf5

>transcript:BL96629_cuf5-protein ID=transcript:BL96629_cuf5-protein|Name=transcript:BL96629_cuf5|organism=Branchiostoma lanceolatum|type=polypeptide|length=470bp
LCNSIYVTENGVLALNDRITDHETGDKETYRNPEPLNDIFESNRTETCAV
LAAFWANNRFTGLEPGRNPKVWYHAYSHGNEPMFDKVDQAILSKFTTLPN
YHSEFILVATWQDMAPPWRADASQFNTFQAVLATDHHHTFVLYRYEDAEM
TWVPVYDEEHVQHHRYPARIGYVIRLPLYDVEDPNSGEWSRHGGEANAYR
MERKVSATTGRLGRVIYQLDDNNNNYVNPRRACQDWYEVEPDPQSFAADV
IGTCPGWGGQAKEERGRWEKTTSDQSSQCYQKIFPLRSGGNQECCYGDKS
QLIDTLNRVHRGTTGFLHRYPKGNTNDRTTNYYKFDFLPRKWCCEESGSD
EYCKRYAEKRPVGTSARYRAIKIANAFGDPHFTTLDNRGFTFNGYGEYVL
LMSTSDAPHEIMLQARTAVAMAQGAQVAATVFSAVAVKQPTNSVQVYLSG
ADTVRVVVDSTDVTLASIAD
Run BLAST on NCBI

mRNA from alignment at Sc0000391:42735..49560-

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>transcript:BL96629_cuf5 ID=transcript:BL96629_cuf5|Name=transcript:BL96629_cuf5|organism=Branchiostoma lanceolatum|type=mRNA|length=6826bp|location=Sequence derived from alignment at Sc0000391:42735..49560- (Branchiostoma lanceolatum)
CTCTGCAACTCTATCTATGTAAGTCTTACAAAATAGTTAGTTTATTCTGG CTATCCTGTTTCAGTAATACATTTAGCTAAACCTTTCTTGAAGTGTTGAA ATGAAGTATTGTTTCTGTGGCATCCCTCCTTTCATCAGGGACTGAGGTTC ATGTCATATTACTTGGATGTCTAGCCTTCATCGACCTTATCTCTATGTTT ACTCTTTCTCTTAGTAAGAGATTCAATATATTTAGCATATTGTAGAAGTG TGAAGAAGCAAAGTTACACATAACCAATCATAACTTTGAAGTAGGAGGGA ACAATATTTTTTTGCCATATTTTAAGTTTGCTGTTGAAACAATTCTGTAG CACAGTAGTAGTAATATGTTAAGTTGATGCATTTTCAAGAAAATGACAAA AACAAAATCGTAAACATTTTAAGATTCACAGCTACTGTATCTAACTTAGA TTTATACCTTTATTTCCCCAGGTGACAGAGAATGGAGTCCTGGCCTTGAA CGACAGGATAACAGACCACGAGACAGGAGACAAGGAGACCTACAGGAACC CTGAACCACTCAACGACATCTTCGAGTCCAACAGAACAGAGACGTGTGCT GTTCTGGCAGCTTTCTGGGCCAACAACCGCTTCACTGGGCTGGAGCCTGG CAGGAACCCTAAGGTAGGTACCTAACACAAGTAGAACAGATGGCCTTCTT GGGGCCAACTTTTTGTCAAAATTTACATGCACAGTATTTAGAGCTTTTTA AAGTTTTTGAACTGATTTATTTGTTCAAAGCTTGTAGAAACAGTTCAAGT TTATTCTGAGGTATGAGAAACCATAAAAGGATGATGCGTTGATGAAACTT AGACATCCAGGTAGTAAGATACGCCCAAAATAATTACTCAAGCAACTGGA TAGAATTTTGACAATTTTTCAAAATTCTATCCAGTTGCTTGAGTAATCAT TTTTGGCGCATAAAAGGATGAGTTTGCAATTTTAGAAGTTTCCACAGCCA TTGACAAACAATGTAAATTTTTCTCCAGGTCTGGTACCATGCATACTCGC ATGGGAATGAGCCCATGTTTGACAAAGTGGACCAGGCCATCCTCAGTAAG TTCACCACCCTGCCCAACTACCACTCCGAGTTCATCCTAGTGGCCACCTG GCAGGACATGGCGCCTCCATGGAGAGCAGATGCCTCACAGGTAATGTCTA TCAAACTTGTAAAAAGAGTGAAATATTTACATATGCCTCATTTGCATACT TGGAACAAGCGAGATGGTCAGTTTATCTAATTATACTCACAGGTAACATT TAAACTTCAAATATTCACATCTGCCTTATTTGCATATTCAGGGCAGCCCA AATGACAATTTTCTTCTAATTTGTCCCAAATATGCAAATCAAACCTTGGT GCTGTCCTTAGTACTGAAATGTATATCTTGTTAAAATTGCTAGCTTTTTC TGCATGTTGTTGTTTTGTTCACTCTTCATTCATTTCTGCTTCATTTTCCC TCCAACTTTCCTATATTTTTCTATGAATTGTCATGTACAACTTCCAATGA TTAAAGAAACAACTGACTATAATCTTCACATTAATTTTCTATCCAGTTCA ACACGTTCCAAGCAGTCCTAGCCACAGACCACCACCACACGTTTGTCCTG TACCGGTATGAAGATGCAGAGATGACCTGGGTGCCTGTGTATGATGAAGA ACATGTACAACACCATAGATATCCAGCAAGGATTGGGTCAGTCTGGAGGT TTTATTTAGTTTCATTTAAGTGTTGTTGTTTTTTTGTAAACTCAACACTT TGAACATGTTACTATCAGTAATGCACTCTGTAAGCCTACCACAAACTTAA ACTTTTCAAAATTGTGAAATTAAGTCACCTCTAACATAAATGAATTTACA AAATGGTGAAATGTTCCTTTCTTTGTTTATTTGTTTACAGCTATGTGATC CGGCTGCCACTGTATGACGTAGAAGACCCAAACTCAGGAGAGTGGTCCAG ACATGGAGGAGAGGCAAACGCCTACAGGATGGAGAGGAAAGTAAGCGCCA CCACAGGCAGACTGGGGAGAGTCATCTACCAACTGGACGACAACAACAAC AACTATGTCAACCCACGCAGGGCTTGTCAGGACTGGTATGAGGTACGTGA CTAAATCTATTCATTTAATCAGACACAAACTTACATACACAGGGAGATGC TTGAAAAGTCATCGTCTTAGATGGTTAGAGGGTTATTCTATTGAAGCTTG TTTGATACTGTAAAATACCAACTGGACGATAATGGCAACAGCTATGTCAA CTCACAGAGGGCATTTCAGGACTGGTATGAGGTATGTGACTTAGATGTGA TCATCCTAGATGGTTAGATATTTATTTTATAGAAGCCCGTTTGATACAAA TATAAAACCTGTGTGATACCCTGCCTGGTACAGTGGAATACCCTTCCTGG CACAGTTGCGACGGCTCCCACTGTTGAGTCGTTCCGTGCCAGGCTGGATG CCTGCCCGCCTTAGCCGGGGACCTCAACTCCCCCCCTACTTTGCCCCTGA AGGGGTTATTTGGGGGTAACCCAATGTAGATGTAGATGATACTGTAAACT GGTCTGAAACACCCTTATTGTAGTACATGCTATCGCATAAATGTGACTGT ATATAAAATTCACATACTGGCCGCTGGTGTATCTTACTGAGGAGTTACTA TGATATGAGAAATATCAATTGTCTGTGAGGATTAGTCTGCTTAATGTATC TACAGACCTTACTGGTGTTCAAACAGATATATAGTGGTAATAACTATCCA GTATTTGAGTATACTGCTGCGGGGTTCCCAGTGACACGGGTGGGCAGCAG TCAGCTAATCTTCACAACACACTTCCAAGTGGATCTGTCCAGCGGGTCCA CGCTGATGAGGCTGCACACTTTCAAATATAGCTTTAGATTTTCAGTTGAA GCATCTTTGTTTTTGTTTTCCCCTCAGGTTGAGCCTGACCCACAGAGTTT TGCAGCAGACGTGATCGGCACATGTCCGGGCTGGGGAGGGCAGGCTAAGG AGGAGAGGGGACGATGGGAGAAAACCACATCTGATCAGTCCTCGCAGTGT TATCAGAAGATCTTTCCACTCAGATCGGGTAGGCAGTTGCTTTCTTAAGG AATAATTAACAATAATAGCAATGCAGCATTTTTTTATTACTTGGAACAAA TTTAGTGCATTTGCCACATATTCATAAATATCATGTTATATTCACTGAAA GTTAAATGATATATAGTATTTGGAAGTGCATGAGTAAAAAAATGGAATGA ATCACAATTGATGATAAGATATCAACTGTCATAAGTGTTAGATTGGTGTT AAGGCCAGTCTTAGGGTACCCAGGGGAATTATGAGCATTGGATTTAAATG CATCGTGAACACAAAGTATATTTTATAGGCCATGCATGGCCACTACATTT TAAATTCATCAGCCAATGTGCTGCTATTGCAAGGTATCGTTCTGTTTATA CCTTAGGTGGTAACCAGGAGTGTTGCTATGGAGACAAGAGTCAGCTGATT GACACCCTGAACAGGGTTCACCGTGGTACGACAGGCTTTCTGCACAGGTA CCCTAAGGTGAGAGGAAAGATGAGATTTATCATGTAGAATTATGGTATAC TTTTGCATCTGTGTTTGTTTCTCTATAGCTTCATAATCACCCTTTGGCAT CACACATCAGCTTCTGTATCAGGCTGTATCTGTATAGCCAATATAACTAC CCTTTGGCGGGATCCCCCGAAAGTGCGAAATGGAACGAAATGGAACGAAA TGGAACGAAATGGAACGAAATGGAACGAAATGGAACGAAATGGAACGAAN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNGTAGACTGGAACAGGAAGCATTTTAAATACAGAAGTGAGTGGT AAATACATAATATAACGTGTTTTATTTCTTGAATCCATGTAATAATATTA AATACAACGTTTTTGTCGCTAGATTCTTCCCTGAAAATGGGAGCGCCGCG TGCAAAGAGCTCGGCCGCTCTTCCTTGATTTTACCAACTATCTGCAAATG AACTGCTGCAAATAGCAGGGAAAACAAGCAAACGGAACTGAGTATCGAAG TTAGGACTAGATTATACAGTTGGTGGTAACAGTGCATCTCATAATTCACC AAGAGGGCATGAGGCAAGCGTTATTTTATTATTTATAAATCTCTCCCCCA AATGGAGCCCCGCATACAAATAAACCGGCATTGTTGCCAGCGCGACGGAA CTGTGGGCGTGCTGCCGACAGGTTGAATCAAACCCCGACTTTCCATTTAT TTAAATACGGTTTTAGTCCATAACTGGTACGTAGCATATGCATATCTTTC CAATTGTTCGGCTTAAAGTCAGACCCCTGACCCCTGAATGGACCCCTCCG TTAATGATATTTAAATGAAGCTCTGCGGCGCGTCACACATTTCACACATT TCACACTCCATTCAAACACGGACGTGGAGTCCCCTGGAGACATTTATGCT TCCTTGTTCACGACAAAACAAAGGGAGGGTGTGAACGAGCAATGCATGTA TTTCACGGTTCACACAACACGCAAACACGCTAGCTGTATACATAATAAGA TTACGCTTGCCTCATGCCCTCTTGGAGATGCAATGTTACCATCAACTTCT GCAATACTATTTCGGTTTGCTTGTTTTCCCTGCTATTTGCAGCAGTTCAT TTGCAGATCGTTGGTACACAAGCAAGAGCGGCGGATCTCTTTGCTCGCGG CGTCTCCATTTTCAGGGAAGAATCTAGCCACACAAACGCGACAAAAACGT TGTATTTAATATTATTACATAGATTCAAGAAATAAAACACGTTATATTAT GTGTTTGCCACTCACTTCTGTATTTAAAATGCTTCCTGTTCCGGTCAACC CCTAATAATTCGCTATCTACTGGTATTTCATTTCATAATGTTACATATGT TGTTTTATTTCGTTCCATTTCGTTCCATTTCGTTCCATTTCGTTCCATTT CGTTCCATTTCGTTCCATTTCGTTTCATTTCGTTCCATTTCGTTCCATTT CGTTCCATTTCGCACTTTCGGGGGACCGCTTTGGCGTAACCCACCAGCTT CTGTATCTGTATACATGTAGCTGGTATAACCGCCCTTCTGTGGTTACCCT GTCTATCATGTTATTTTGTATCAATGTACTGTAGGACTACATGAAGTTAG AAATTTGTGAATGCAAATGAAGTCAAAGTCAAAGCATGTTGATTTCAATA TCTGTTTTGGAAGTATAAAATGTACTTATATTAAACACTAACTCCCTTGA CAATGAAATTGTTTCCATGCCACTTTCAGGGAAACACCAATGACCGGACG ACCAACTACTACAAGTTTGACTTCCTGCCGCGGAAGTGGTGCTGTGAAGA GTCGGGTTCGGACGAGTACTGCAAACGGTACGCAGAAAAACGACCTGTCG GGACATCAGCTCGCTACAGAGCAATCAAGATCGGTAAGAACTTGTCTTAC TTGGCTTCAATTTGTAGTATACAATGTAATTTGGTTTCATAATTGTACTA AGTTAAAGATTTAAATATGTACTAGATACTAGTTGAAGGTAGGGCAAGAG GCAATGTGAAGTAGACAGTTGTCTGGATCTAAAGGTTGGGAGTTTGAATC CTGGCTGTTGTAGCTCACCTGACATGCATGCTACAGGAAAGGCCCTCAGT CCTTAGGACAGGACATTAACCTGCAGTCTACTGTTTGTTGTTCTTGTAAT AAAAAAGCTAGTGGAATTTCCCTGGTACAATAGACCTCTATGAAACTGTA CAGTGTCTTTCTTGTCTGTTACGACCAGAGATTTGCTCTTTAGTGTCAGC TCAAACTAGACCAAGATCACATTGAAATTCCCTTTTTTCCATTCATTCAT TCATCATTTGTTCACTCACTCACTCACTCACTCACTCACTCACTCACATA CTCACTCACTCACTCATTCATTCATTCATATATTCATTTATTCATTAATT TATTCATTCATTCATTGCTTCCTTCACAGCCAATGCCTTTGGTGACCCCC ACTTCACCACGCTGGATAACAGAGGCTTCACCTTCAATGGTTATGGGGAG TATGTGCTGCTGATGTCCACCAGTGATGCTCCACATGAGATCATGCTTCA GGCGCGCACGGCTGTGGCCATGGCTCAGGGGGCGCAAGTAGCAGCTACTG TCTTCAGGTAACATTGCAAGGAAACTAGGTTTATACTCACTCAAACCAAA AGATTTGTATTGCACAAAATAGATTGATAAAGGAACACATCTTGACATGT TACTCGATTTACCAATCTAACATCAACCATCGTTGTTCAGATGATAAACT GATCCTCGAGGTAACAGTCATTCAAACAACTGGATAGGTTTAGGTAGCAT CCACCACATTTTGTCCCTGACTGGATGCTCCCTGAAACATCTGACCATTT CCTAAATCTATCCAGTTGTTTGAGTAACTGTCATACCTTGCAATATCTCT TTACCCGGTTGTTAACCCTTCATTGATGTATAAACTGATTGCATTTGTCT TTAAATCCTTACAGTGCAGTAGCTGTAAAACAGCCCACTAACAGCGTCCA AGTGTACCTGTCCGGGGCTGACACAGTGCGAGTCGTGGTGGACAGTACAG ACGTCACCTTGGCATCCATCGCAGAC

Coding sequence (CDS) from alignment at Sc0000391:42735..49560-

>transcript:BL96629_cuf5 ID=transcript:BL96629_cuf5|Name=transcript:BL96629_cuf5|organism=Branchiostoma lanceolatum|type=CDS|length=14100bp|location=Sequence derived from alignment at Sc0000391:42735..49560- (Branchiostoma lanceolatum)
CTCTGCAACTCTATCTATGTGACAGAGAATGGAGTCCTGGCCTTGAACGA
CAGGATAACAGACCACGAGACAGGAGACAAGGAGACCTACAGGAACCCTG
AACCACTCAACGACATCTTCGAGTCCAACAGAACAGAGACGTGTGCTGTT
CTGGCAGCTTTCTGGGCCAACAACCGCTTCACTGGGCTGGAGCCTGGCAG
GAACCCTAAGGTCTGGTACCATGCATACTCGCATGGGAATGAGCCCATGT
TTGACAAAGTGGACCAGGCCATCCTCAGTAAGTTCACCACCCTGCCCAAC
TACCACTCCGAGTTCATCCTAGTGGCCACCTGGCAGGACATGGCGCCTCC
ATGGAGAGCAGATGCCTCACAGTTCAACACGTTCCAAGCAGTCCTAGCCA
CAGACCACCACCACACGTTTGTCCTGTACCGGTATGAAGATGCAGAGATG
ACCTGGGTGCCTGTGTATGATGAAGAACATGTACAACACCATAGATATCC
AGCAAGGATTGGCTATGTGATCCGGCTGCCACTGTATGACGTAGAAGACC
CAAACTCAGGAGAGTGGTCCAGACATGGAGGAGAGGCAAACGCCTACAGG
ATGGAGAGGAAAGTAAGCGCCACCACAGGCAGACTGGGGAGAGTCATCTA
CCAACTGGACGACAACAACAACAACTATGTCAACCCACGCAGGGCTTGTC
AGGACTGGTATGAGGTTGAGCCTGACCCACAGAGTTTTGCAGCAGACGTG
ATCGGCACATGTCCGGGCTGGGGAGGGCAGGCTAAGGAGGAGAGGGGACG
ATGGGAGAAAACCACATCTGATCAGTCCTCGCAGTGTTATCAGAAGATCT
TTCCACTCAGATCGGGTGGTAACCAGGAGTGTTGCTATGGAGACAAGAGT
CAGCTGATTGACACCCTGAACAGGGTTCACCGTGGTACGACAGGCTTTCT
GCACAGGTACCCTAAGGGAAACACCAATGACCGGACGACCAACTACTACA
AGTTTGACTTCCTGCCGCGGAAGTGGTGCTGTGAAGAGTCGGGTTCGGAC
GAGTACTGCAAACGGTACGCAGAAAAACGACCTGTCGGGACATCAGCTCG
CTACAGAGCAATCAAGATCGCCAATGCCTTTGGTGACCCCCACTTCACCA
CGCTGGATAACAGAGGCTTCACCTTCAATGGTTATGGGGAGTATGTGCTG
CTGATGTCCACCAGTGATGCTCCACATGAGATCATGCTTCAGGCGCGCAC
GGCTGTGGCCATGGCTCAGGGGGCGCAAGTAGCAGCTACTGTCTTCAGTG
CAGTAGCTGTAAAACAGCCCACTAACAGCGTCCAAGTGTACCTGTCCGGG
GCTGACACAGTGCGAGTCGTGGTGGACAGTACAGACGTCACCTTGGCATC
CATCGCAGACCTCTGCAACTCTATCTATGTGACAGAGAATGGAGTCCTGG
CCTTGAACGACAGGATAACAGACCACGAGACAGGAGACAAGGAGACCTAC
AGGAACCCTGAACCACTCAACGACATCTTCGAGTCCAACAGAACAGAGAC
GTGTGCTGTTCTGGCAGCTTTCTGGGCCAACAACCGCTTCACTGGGCTGG
AGCCTGGCAGGAACCCTAAGGTCTGGTACCATGCATACTCGCATGGGAAT
GAGCCCATGTTTGACAAAGTGGACCAGGCCATCCTCAGTAAGTTCACCAC
CCTGCCCAACTACCACTCCGAGTTCATCCTAGTGGCCACCTGGCAGGACA
TGGCGCCTCCATGGAGAGCAGATGCCTCACAGTTCAACACGTTCCAAGCA
GTCCTAGCCACAGACCACCACCACACGTTTGTCCTGTACCGGTATGAAGA
TGCAGAGATGACCTGGGTGCCTGTGTATGATGAAGAACATGTACAACACC
ATAGATATCCAGCAAGGATTGGCTATGTGATCCGGCTGCCACTGTATGAC
GTAGAAGACCCAAACTCAGGAGAGTGGTCCAGACATGGAGGAGAGGCAAA
CGCCTACAGGATGGAGAGGAAAGTAAGCGCCACCACAGGCAGACTGGGGA
GAGTCATCTACCAACTGGACGACAACAACAACAACTATGTCAACCCACGC
AGGGCTTGTCAGGACTGGTATGAGGTTGAGCCTGACCCACAGAGTTTTGC
AGCAGACGTGATCGGCACATGTCCGGGCTGGGGAGGGCAGGCTAAGGAGG
AGAGGGGACGATGGGAGAAAACCACATCTGATCAGTCCTCGCAGTGTTAT
CAGAAGATCTTTCCACTCAGATCGGGTGGTAACCAGGAGTGTTGCTATGG
AGACAAGAGTCAGCTGATTGACACCCTGAACAGGGTTCACCGTGGTACGA
CAGGCTTTCTGCACAGGTACCCTAAGGGAAACACCAATGACCGGACGACC
AACTACTACAAGTTTGACTTCCTGCCGCGGAAGTGGTGCTGTGAAGAGTC
GGGTTCGGACGAGTACTGCAAACGGTACGCAGAAAAACGACCTGTCGGGA
CATCAGCTCGCTACAGAGCAATCAAGATCGCCAATGCCTTTGGTGACCCC
CACTTCACCACGCTGGATAACAGAGGCTTCACCTTCAATGGTTATGGGGA
GTATGTGCTGCTGATGTCCACCAGTGATGCTCCACATGAGATCATGCTTC
AGGCGCGCACGGCTGTGGCCATGGCTCAGGGGGCGCAAGTAGCAGCTACT
GTCTTCAGTGCAGTAGCTGTAAAACAGCCCACTAACAGCGTCCAAGTGTA
CCTGTCCGGGGCTGACACAGTGCGAGTCGTGGTGGACAGTACAGACGTCA
CCTTGGCATCCATCGCAGACCTCTGCAACTCTATCTATGTGACAGAGAAT
GGAGTCCTGGCCTTGAACGACAGGATAACAGACCACGAGACAGGAGACAA
GGAGACCTACAGGAACCCTGAACCACTCAACGACATCTTCGAGTCCAACA
GAACAGAGACGTGTGCTGTTCTGGCAGCTTTCTGGGCCAACAACCGCTTC
ACTGGGCTGGAGCCTGGCAGGAACCCTAAGGTCTGGTACCATGCATACTC
GCATGGGAATGAGCCCATGTTTGACAAAGTGGACCAGGCCATCCTCAGTA
AGTTCACCACCCTGCCCAACTACCACTCCGAGTTCATCCTAGTGGCCACC
TGGCAGGACATGGCGCCTCCATGGAGAGCAGATGCCTCACAGTTCAACAC
GTTCCAAGCAGTCCTAGCCACAGACCACCACCACACGTTTGTCCTGTACC
GGTATGAAGATGCAGAGATGACCTGGGTGCCTGTGTATGATGAAGAACAT
GTACAACACCATAGATATCCAGCAAGGATTGGCTATGTGATCCGGCTGCC
ACTGTATGACGTAGAAGACCCAAACTCAGGAGAGTGGTCCAGACATGGAG
GAGAGGCAAACGCCTACAGGATGGAGAGGAAAGTAAGCGCCACCACAGGC
AGACTGGGGAGAGTCATCTACCAACTGGACGACAACAACAACAACTATGT
CAACCCACGCAGGGCTTGTCAGGACTGGTATGAGGTTGAGCCTGACCCAC
AGAGTTTTGCAGCAGACGTGATCGGCACATGTCCGGGCTGGGGAGGGCAG
GCTAAGGAGGAGAGGGGACGATGGGAGAAAACCACATCTGATCAGTCCTC
GCAGTGTTATCAGAAGATCTTTCCACTCAGATCGGGTGGTAACCAGGAGT
GTTGCTATGGAGACAAGAGTCAGCTGATTGACACCCTGAACAGGGTTCAC
CGTGGTACGACAGGCTTTCTGCACAGGTACCCTAAGGGAAACACCAATGA
CCGGACGACCAACTACTACAAGTTTGACTTCCTGCCGCGGAAGTGGTGCT
GTGAAGAGTCGGGTTCGGACGAGTACTGCAAACGGTACGCAGAAAAACGA
CCTGTCGGGACATCAGCTCGCTACAGAGCAATCAAGATCGCCAATGCCTT
TGGTGACCCCCACTTCACCACGCTGGATAACAGAGGCTTCACCTTCAATG
GTTATGGGGAGTATGTGCTGCTGATGTCCACCAGTGATGCTCCACATGAG
ATCATGCTTCAGGCGCGCACGGCTGTGGCCATGGCTCAGGGGGCGCAAGT
AGCAGCTACTGTCTTCAGTGCAGTAGCTGTAAAACAGCCCACTAACAGCG
TCCAAGTGTACCTGTCCGGGGCTGACACAGTGCGAGTCGTGGTGGACAGT
ACAGACGTCACCTTGGCATCCATCGCAGACCTCTGCAACTCTATCTATGT
GACAGAGAATGGAGTCCTGGCCTTGAACGACAGGATAACAGACCACGAGA
CAGGAGACAAGGAGACCTACAGGAACCCTGAACCACTCAACGACATCTTC
GAGTCCAACAGAACAGAGACGTGTGCTGTTCTGGCAGCTTTCTGGGCCAA
CAACCGCTTCACTGGGCTGGAGCCTGGCAGGAACCCTAAGGTCTGGTACC
ATGCATACTCGCATGGGAATGAGCCCATGTTTGACAAAGTGGACCAGGCC
ATCCTCAGTAAGTTCACCACCCTGCCCAACTACCACTCCGAGTTCATCCT
AGTGGCCACCTGGCAGGACATGGCGCCTCCATGGAGAGCAGATGCCTCAC
AGTTCAACACGTTCCAAGCAGTCCTAGCCACAGACCACCACCACACGTTT
GTCCTGTACCGGTATGAAGATGCAGAGATGACCTGGGTGCCTGTGTATGA
TGAAGAACATGTACAACACCATAGATATCCAGCAAGGATTGGCTATGTGA
TCCGGCTGCCACTGTATGACGTAGAAGACCCAAACTCAGGAGAGTGGTCC
AGACATGGAGGAGAGGCAAACGCCTACAGGATGGAGAGGAAAGTAAGCGC
CACCACAGGCAGACTGGGGAGAGTCATCTACCAACTGGACGACAACAACA
ACAACTATGTCAACCCACGCAGGGCTTGTCAGGACTGGTATGAGGTTGAG
CCTGACCCACAGAGTTTTGCAGCAGACGTGATCGGCACATGTCCGGGCTG
GGGAGGGCAGGCTAAGGAGGAGAGGGGACGATGGGAGAAAACCACATCTG
ATCAGTCCTCGCAGTGTTATCAGAAGATCTTTCCACTCAGATCGGGTGGT
AACCAGGAGTGTTGCTATGGAGACAAGAGTCAGCTGATTGACACCCTGAA
CAGGGTTCACCGTGGTACGACAGGCTTTCTGCACAGGTACCCTAAGGGAA
ACACCAATGACCGGACGACCAACTACTACAAGTTTGACTTCCTGCCGCGG
AAGTGGTGCTGTGAAGAGTCGGGTTCGGACGAGTACTGCAAACGGTACGC
AGAAAAACGACCTGTCGGGACATCAGCTCGCTACAGAGCAATCAAGATCG
CCAATGCCTTTGGTGACCCCCACTTCACCACGCTGGATAACAGAGGCTTC
ACCTTCAATGGTTATGGGGAGTATGTGCTGCTGATGTCCACCAGTGATGC
TCCACATGAGATCATGCTTCAGGCGCGCACGGCTGTGGCCATGGCTCAGG
GGGCGCAAGTAGCAGCTACTGTCTTCAGTGCAGTAGCTGTAAAACAGCCC
ACTAACAGCGTCCAAGTGTACCTGTCCGGGGCTGACACAGTGCGAGTCGT
GGTGGACAGTACAGACGTCACCTTGGCATCCATCGCAGACCTCTGCAACT
CTATCTATGTGACAGAGAATGGAGTCCTGGCCTTGAACGACAGGATAACA
GACCACGAGACAGGAGACAAGGAGACCTACAGGAACCCTGAACCACTCAA
CGACATCTTCGAGTCCAACAGAACAGAGACGTGTGCTGTTCTGGCAGCTT
TCTGGGCCAACAACCGCTTCACTGGGCTGGAGCCTGGCAGGAACCCTAAG
GTCTGGTACCATGCATACTCGCATGGGAATGAGCCCATGTTTGACAAAGT
GGACCAGGCCATCCTCAGTAAGTTCACCACCCTGCCCAACTACCACTCCG
AGTTCATCCTAGTGGCCACCTGGCAGGACATGGCGCCTCCATGGAGAGCA
GATGCCTCACAGTTCAACACGTTCCAAGCAGTCCTAGCCACAGACCACCA
CCACACGTTTGTCCTGTACCGGTATGAAGATGCAGAGATGACCTGGGTGC
CTGTGTATGATGAAGAACATGTACAACACCATAGATATCCAGCAAGGATT
GGCTATGTGATCCGGCTGCCACTGTATGACGTAGAAGACCCAAACTCAGG
AGAGTGGTCCAGACATGGAGGAGAGGCAAACGCCTACAGGATGGAGAGGA
AAGTAAGCGCCACCACAGGCAGACTGGGGAGAGTCATCTACCAACTGGAC
GACAACAACAACAACTATGTCAACCCACGCAGGGCTTGTCAGGACTGGTA
TGAGGTTGAGCCTGACCCACAGAGTTTTGCAGCAGACGTGATCGGCACAT
GTCCGGGCTGGGGAGGGCAGGCTAAGGAGGAGAGGGGACGATGGGAGAAA
ACCACATCTGATCAGTCCTCGCAGTGTTATCAGAAGATCTTTCCACTCAG
ATCGGGTGGTAACCAGGAGTGTTGCTATGGAGACAAGAGTCAGCTGATTG
ACACCCTGAACAGGGTTCACCGTGGTACGACAGGCTTTCTGCACAGGTAC
CCTAAGGGAAACACCAATGACCGGACGACCAACTACTACAAGTTTGACTT
CCTGCCGCGGAAGTGGTGCTGTGAAGAGTCGGGTTCGGACGAGTACTGCA
AACGGTACGCAGAAAAACGACCTGTCGGGACATCAGCTCGCTACAGAGCA
ATCAAGATCGCCAATGCCTTTGGTGACCCCCACTTCACCACGCTGGATAA
CAGAGGCTTCACCTTCAATGGTTATGGGGAGTATGTGCTGCTGATGTCCA
CCAGTGATGCTCCACATGAGATCATGCTTCAGGCGCGCACGGCTGTGGCC
ATGGCTCAGGGGGCGCAAGTAGCAGCTACTGTCTTCAGTGCAGTAGCTGT
AAAACAGCCCACTAACAGCGTCCAAGTGTACCTGTCCGGGGCTGACACAG
TGCGAGTCGTGGTGGACAGTACAGACGTCACCTTGGCATCCATCGCAGAC
CTCTGCAACTCTATCTATGTGACAGAGAATGGAGTCCTGGCCTTGAACGA
CAGGATAACAGACCACGAGACAGGAGACAAGGAGACCTACAGGAACCCTG
AACCACTCAACGACATCTTCGAGTCCAACAGAACAGAGACGTGTGCTGTT
CTGGCAGCTTTCTGGGCCAACAACCGCTTCACTGGGCTGGAGCCTGGCAG
GAACCCTAAGGTCTGGTACCATGCATACTCGCATGGGAATGAGCCCATGT
TTGACAAAGTGGACCAGGCCATCCTCAGTAAGTTCACCACCCTGCCCAAC
TACCACTCCGAGTTCATCCTAGTGGCCACCTGGCAGGACATGGCGCCTCC
ATGGAGAGCAGATGCCTCACAGTTCAACACGTTCCAAGCAGTCCTAGCCA
CAGACCACCACCACACGTTTGTCCTGTACCGGTATGAAGATGCAGAGATG
ACCTGGGTGCCTGTGTATGATGAAGAACATGTACAACACCATAGATATCC
AGCAAGGATTGGCTATGTGATCCGGCTGCCACTGTATGACGTAGAAGACC
CAAACTCAGGAGAGTGGTCCAGACATGGAGGAGAGGCAAACGCCTACAGG
ATGGAGAGGAAAGTAAGCGCCACCACAGGCAGACTGGGGAGAGTCATCTA
CCAACTGGACGACAACAACAACAACTATGTCAACCCACGCAGGGCTTGTC
AGGACTGGTATGAGGTTGAGCCTGACCCACAGAGTTTTGCAGCAGACGTG
ATCGGCACATGTCCGGGCTGGGGAGGGCAGGCTAAGGAGGAGAGGGGACG
ATGGGAGAAAACCACATCTGATCAGTCCTCGCAGTGTTATCAGAAGATCT
TTCCACTCAGATCGGGTGGTAACCAGGAGTGTTGCTATGGAGACAAGAGT
CAGCTGATTGACACCCTGAACAGGGTTCACCGTGGTACGACAGGCTTTCT
GCACAGGTACCCTAAGGGAAACACCAATGACCGGACGACCAACTACTACA
AGTTTGACTTCCTGCCGCGGAAGTGGTGCTGTGAAGAGTCGGGTTCGGAC
GAGTACTGCAAACGGTACGCAGAAAAACGACCTGTCGGGACATCAGCTCG
CTACAGAGCAATCAAGATCGCCAATGCCTTTGGTGACCCCCACTTCACCA
CGCTGGATAACAGAGGCTTCACCTTCAATGGTTATGGGGAGTATGTGCTG
CTGATGTCCACCAGTGATGCTCCACATGAGATCATGCTTCAGGCGCGCAC
GGCTGTGGCCATGGCTCAGGGGGCGCAAGTAGCAGCTACTGTCTTCAGTG
CAGTAGCTGTAAAACAGCCCACTAACAGCGTCCAAGTGTACCTGTCCGGG
GCTGACACAGTGCGAGTCGTGGTGGACAGTACAGACGTCACCTTGGCATC
CATCGCAGACCTCTGCAACTCTATCTATGTGACAGAGAATGGAGTCCTGG
CCTTGAACGACAGGATAACAGACCACGAGACAGGAGACAAGGAGACCTAC
AGGAACCCTGAACCACTCAACGACATCTTCGAGTCCAACAGAACAGAGAC
GTGTGCTGTTCTGGCAGCTTTCTGGGCCAACAACCGCTTCACTGGGCTGG
AGCCTGGCAGGAACCCTAAGGTCTGGTACCATGCATACTCGCATGGGAAT
GAGCCCATGTTTGACAAAGTGGACCAGGCCATCCTCAGTAAGTTCACCAC
CCTGCCCAACTACCACTCCGAGTTCATCCTAGTGGCCACCTGGCAGGACA
TGGCGCCTCCATGGAGAGCAGATGCCTCACAGTTCAACACGTTCCAAGCA
GTCCTAGCCACAGACCACCACCACACGTTTGTCCTGTACCGGTATGAAGA
TGCAGAGATGACCTGGGTGCCTGTGTATGATGAAGAACATGTACAACACC
ATAGATATCCAGCAAGGATTGGCTATGTGATCCGGCTGCCACTGTATGAC
GTAGAAGACCCAAACTCAGGAGAGTGGTCCAGACATGGAGGAGAGGCAAA
CGCCTACAGGATGGAGAGGAAAGTAAGCGCCACCACAGGCAGACTGGGGA
GAGTCATCTACCAACTGGACGACAACAACAACAACTATGTCAACCCACGC
AGGGCTTGTCAGGACTGGTATGAGGTTGAGCCTGACCCACAGAGTTTTGC
AGCAGACGTGATCGGCACATGTCCGGGCTGGGGAGGGCAGGCTAAGGAGG
AGAGGGGACGATGGGAGAAAACCACATCTGATCAGTCCTCGCAGTGTTAT
CAGAAGATCTTTCCACTCAGATCGGGTGGTAACCAGGAGTGTTGCTATGG
AGACAAGAGTCAGCTGATTGACACCCTGAACAGGGTTCACCGTGGTACGA
CAGGCTTTCTGCACAGGTACCCTAAGGGAAACACCAATGACCGGACGACC
AACTACTACAAGTTTGACTTCCTGCCGCGGAAGTGGTGCTGTGAAGAGTC
GGGTTCGGACGAGTACTGCAAACGGTACGCAGAAAAACGACCTGTCGGGA
CATCAGCTCGCTACAGAGCAATCAAGATCGCCAATGCCTTTGGTGACCCC
CACTTCACCACGCTGGATAACAGAGGCTTCACCTTCAATGGTTATGGGGA
GTATGTGCTGCTGATGTCCACCAGTGATGCTCCACATGAGATCATGCTTC
AGGCGCGCACGGCTGTGGCCATGGCTCAGGGGGCGCAAGTAGCAGCTACT
GTCTTCAGTGCAGTAGCTGTAAAACAGCCCACTAACAGCGTCCAAGTGTA
CCTGTCCGGGGCTGACACAGTGCGAGTCGTGGTGGACAGTACAGACGTCA
CCTTGGCATCCATCGCAGACCTCTGCAACTCTATCTATGTGACAGAGAAT
GGAGTCCTGGCCTTGAACGACAGGATAACAGACCACGAGACAGGAGACAA
GGAGACCTACAGGAACCCTGAACCACTCAACGACATCTTCGAGTCCAACA
GAACAGAGACGTGTGCTGTTCTGGCAGCTTTCTGGGCCAACAACCGCTTC
ACTGGGCTGGAGCCTGGCAGGAACCCTAAGGTCTGGTACCATGCATACTC
GCATGGGAATGAGCCCATGTTTGACAAAGTGGACCAGGCCATCCTCAGTA
AGTTCACCACCCTGCCCAACTACCACTCCGAGTTCATCCTAGTGGCCACC
TGGCAGGACATGGCGCCTCCATGGAGAGCAGATGCCTCACAGTTCAACAC
GTTCCAAGCAGTCCTAGCCACAGACCACCACCACACGTTTGTCCTGTACC
GGTATGAAGATGCAGAGATGACCTGGGTGCCTGTGTATGATGAAGAACAT
GTACAACACCATAGATATCCAGCAAGGATTGGCTATGTGATCCGGCTGCC
ACTGTATGACGTAGAAGACCCAAACTCAGGAGAGTGGTCCAGACATGGAG
GAGAGGCAAACGCCTACAGGATGGAGAGGAAAGTAAGCGCCACCACAGGC
AGACTGGGGAGAGTCATCTACCAACTGGACGACAACAACAACAACTATGT
CAACCCACGCAGGGCTTGTCAGGACTGGTATGAGGTTGAGCCTGACCCAC
AGAGTTTTGCAGCAGACGTGATCGGCACATGTCCGGGCTGGGGAGGGCAG
GCTAAGGAGGAGAGGGGACGATGGGAGAAAACCACATCTGATCAGTCCTC
GCAGTGTTATCAGAAGATCTTTCCACTCAGATCGGGTGGTAACCAGGAGT
GTTGCTATGGAGACAAGAGTCAGCTGATTGACACCCTGAACAGGGTTCAC
CGTGGTACGACAGGCTTTCTGCACAGGTACCCTAAGGGAAACACCAATGA
CCGGACGACCAACTACTACAAGTTTGACTTCCTGCCGCGGAAGTGGTGCT
GTGAAGAGTCGGGTTCGGACGAGTACTGCAAACGGTACGCAGAAAAACGA
CCTGTCGGGACATCAGCTCGCTACAGAGCAATCAAGATCGCCAATGCCTT
TGGTGACCCCCACTTCACCACGCTGGATAACAGAGGCTTCACCTTCAATG
GTTATGGGGAGTATGTGCTGCTGATGTCCACCAGTGATGCTCCACATGAG
ATCATGCTTCAGGCGCGCACGGCTGTGGCCATGGCTCAGGGGGCGCAAGT
AGCAGCTACTGTCTTCAGTGCAGTAGCTGTAAAACAGCCCACTAACAGCG
TCCAAGTGTACCTGTCCGGGGCTGACACAGTGCGAGTCGTGGTGGACAGT
ACAGACGTCACCTTGGCATCCATCGCAGACCTCTGCAACTCTATCTATGT
GACAGAGAATGGAGTCCTGGCCTTGAACGACAGGATAACAGACCACGAGA
CAGGAGACAAGGAGACCTACAGGAACCCTGAACCACTCAACGACATCTTC
GAGTCCAACAGAACAGAGACGTGTGCTGTTCTGGCAGCTTTCTGGGCCAA
CAACCGCTTCACTGGGCTGGAGCCTGGCAGGAACCCTAAGGTCTGGTACC
ATGCATACTCGCATGGGAATGAGCCCATGTTTGACAAAGTGGACCAGGCC
ATCCTCAGTAAGTTCACCACCCTGCCCAACTACCACTCCGAGTTCATCCT
AGTGGCCACCTGGCAGGACATGGCGCCTCCATGGAGAGCAGATGCCTCAC
AGTTCAACACGTTCCAAGCAGTCCTAGCCACAGACCACCACCACACGTTT
GTCCTGTACCGGTATGAAGATGCAGAGATGACCTGGGTGCCTGTGTATGA
TGAAGAACATGTACAACACCATAGATATCCAGCAAGGATTGGCTATGTGA
TCCGGCTGCCACTGTATGACGTAGAAGACCCAAACTCAGGAGAGTGGTCC
AGACATGGAGGAGAGGCAAACGCCTACAGGATGGAGAGGAAAGTAAGCGC
CACCACAGGCAGACTGGGGAGAGTCATCTACCAACTGGACGACAACAACA
ACAACTATGTCAACCCACGCAGGGCTTGTCAGGACTGGTATGAGGTTGAG
CCTGACCCACAGAGTTTTGCAGCAGACGTGATCGGCACATGTCCGGGCTG
GGGAGGGCAGGCTAAGGAGGAGAGGGGACGATGGGAGAAAACCACATCTG
ATCAGTCCTCGCAGTGTTATCAGAAGATCTTTCCACTCAGATCGGGTGGT
AACCAGGAGTGTTGCTATGGAGACAAGAGTCAGCTGATTGACACCCTGAA
CAGGGTTCACCGTGGTACGACAGGCTTTCTGCACAGGTACCCTAAGGGAA
ACACCAATGACCGGACGACCAACTACTACAAGTTTGACTTCCTGCCGCGG
AAGTGGTGCTGTGAAGAGTCGGGTTCGGACGAGTACTGCAAACGGTACGC
AGAAAAACGACCTGTCGGGACATCAGCTCGCTACAGAGCAATCAAGATCG
CCAATGCCTTTGGTGACCCCCACTTCACCACGCTGGATAACAGAGGCTTC
ACCTTCAATGGTTATGGGGAGTATGTGCTGCTGATGTCCACCAGTGATGC
TCCACATGAGATCATGCTTCAGGCGCGCACGGCTGTGGCCATGGCTCAGG
GGGCGCAAGTAGCAGCTACTGTCTTCAGTGCAGTAGCTGTAAAACAGCCC
ACTAACAGCGTCCAAGTGTACCTGTCCGGGGCTGACACAGTGCGAGTCGT
GGTGGACAGTACAGACGTCACCTTGGCATCCATCGCAGACCTCTGCAACT
CTATCTATGTGACAGAGAATGGAGTCCTGGCCTTGAACGACAGGATAACA
GACCACGAGACAGGAGACAAGGAGACCTACAGGAACCCTGAACCACTCAA
CGACATCTTCGAGTCCAACAGAACAGAGACGTGTGCTGTTCTGGCAGCTT
TCTGGGCCAACAACCGCTTCACTGGGCTGGAGCCTGGCAGGAACCCTAAG
GTCTGGTACCATGCATACTCGCATGGGAATGAGCCCATGTTTGACAAAGT
GGACCAGGCCATCCTCAGTAAGTTCACCACCCTGCCCAACTACCACTCCG
AGTTCATCCTAGTGGCCACCTGGCAGGACATGGCGCCTCCATGGAGAGCA
GATGCCTCACAGTTCAACACGTTCCAAGCAGTCCTAGCCACAGACCACCA
CCACACGTTTGTCCTGTACCGGTATGAAGATGCAGAGATGACCTGGGTGC
CTGTGTATGATGAAGAACATGTACAACACCATAGATATCCAGCAAGGATT
GGCTATGTGATCCGGCTGCCACTGTATGACGTAGAAGACCCAAACTCAGG
AGAGTGGTCCAGACATGGAGGAGAGGCAAACGCCTACAGGATGGAGAGGA
AAGTAAGCGCCACCACAGGCAGACTGGGGAGAGTCATCTACCAACTGGAC
GACAACAACAACAACTATGTCAACCCACGCAGGGCTTGTCAGGACTGGTA
TGAGGTTGAGCCTGACCCACAGAGTTTTGCAGCAGACGTGATCGGCACAT
GTCCGGGCTGGGGAGGGCAGGCTAAGGAGGAGAGGGGACGATGGGAGAAA
ACCACATCTGATCAGTCCTCGCAGTGTTATCAGAAGATCTTTCCACTCAG
ATCGGGTGGTAACCAGGAGTGTTGCTATGGAGACAAGAGTCAGCTGATTG
ACACCCTGAACAGGGTTCACCGTGGTACGACAGGCTTTCTGCACAGGTAC
CCTAAGGGAAACACCAATGACCGGACGACCAACTACTACAAGTTTGACTT
CCTGCCGCGGAAGTGGTGCTGTGAAGAGTCGGGTTCGGACGAGTACTGCA
AACGGTACGCAGAAAAACGACCTGTCGGGACATCAGCTCGCTACAGAGCA
ATCAAGATCGCCAATGCCTTTGGTGACCCCCACTTCACCACGCTGGATAA
CAGAGGCTTCACCTTCAATGGTTATGGGGAGTATGTGCTGCTGATGTCCA
CCAGTGATGCTCCACATGAGATCATGCTTCAGGCGCGCACGGCTGTGGCC
ATGGCTCAGGGGGCGCAAGTAGCAGCTACTGTCTTCAGTGCAGTAGCTGT
AAAACAGCCCACTAACAGCGTCCAAGTGTACCTGTCCGGGGCTGACACAG
TGCGAGTCGTGGTGGACAGTACAGACGTCACCTTGGCATCCATCGCAGAC
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
gene:BL96629gene:BL96629Branchiostoma lanceolatumgene
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
transcript:BL96629_cuf5transcript:BL96629_cuf5-proteinBranchiostoma lanceolatumpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
BL96629_cuf5-E1BL96629_cuf5-E1-1564476830-455215Branchiostoma lanceolatumexon
BL96629_cuf5-E2BL96629_cuf5-E2-1564476830-455213Branchiostoma lanceolatumexon
BL96629_cuf5-E3BL96629_cuf5-E3-1564476830-455211Branchiostoma lanceolatumexon
BL96629_cuf5-E4BL96629_cuf5-E4-1564476830-455209Branchiostoma lanceolatumexon
BL96629_cuf5-E5BL96629_cuf5-E5-1564476830-455207Branchiostoma lanceolatumexon
BL96629_cuf5-E6BL96629_cuf5-E6-1564476830-455205Branchiostoma lanceolatumexon
BL96629_cuf5-E7BL96629_cuf5-E7-1564476830-455203Branchiostoma lanceolatumexon
BL96629_cuf5-E8BL96629_cuf5-E8-1564476830-455201Branchiostoma lanceolatumexon
BL96629_cuf5-E9BL96629_cuf5-E9-1564476830-455199Branchiostoma lanceolatumexon
BL96629_cuf5-E10BL96629_cuf5-E10-1564476830-455197Branchiostoma lanceolatumexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000391genomeSc0000391:42735..49560 -
Properties
Property NameValue
Transcript idBL96629_cuf5
Biotypeprotein_coding