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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL96622_cuf1 >transcript:BL96622_cuf1-protein ID=transcript:BL96622_cuf1-protein|Name=transcript:BL96622_cuf1|organism=Branchiostoma lanceolatum|type=polypeptide|length=100bp
SDESETRQGFQFTYTAIATSAPGCGGNLTVPPEGTVTSPGYPSNYGNDQR
CEWTITAPEGSRVRLTFASFHLDDDYDFLIVNDGGSGRATRLQSLTGELS Run BLAST on NCBI mRNA from alignment at Sc0000599:16649..18994+ Legend: exonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL96622_cuf1 ID=transcript:BL96622_cuf1|Name=transcript:BL96622_cuf1|organism=Branchiostoma lanceolatum|type=mRNA|length=2346bp|location=Sequence derived from alignment at Sc0000599:16649..18994+ (Branchiostoma lanceolatum)
TCTGACGAGAGTGAAACGCGTCAGGGGTTCCAGTTCACCTACACAGGTGA
GGTGTTTGATTACAGCGAGTATGTTTGTTTTGTTGCCGATGATTGGAATG
CAGGCTATGGCGCAGCTTCCGTTTGGCTTAAACAGCTCAATTTGATAGAA
TGCATGAATTAACAACACACGGCAAAGAGTGCCTGTCACCTAACAGTGGG
ATAGTTGTCACAAATTACGTCTCGATACAGGAAGGCACAACCAGATTCCT
CTGTGGTATAAATATTGCCAGTATTGTAATACAAATTAAGTAAAAAATCA
ACAAAATCTAATTTCAGATTCTAAACTGTGCTATCAGAAAATAATACTTT
TTACCTGTTACAATATTTCATGCTTCGAATATCTAAATGCAACTGATAAA
TTTCTGTGCAGTATACGCCTCATGGCATTCTACAAAAGGTTTGTAAAGGA
CAATTCAAGTTGCATATCCTGAAAGATCTATTTGATCCACTCACACCGGG
AAGAACCCTTACTATTTTAGATCCGTGTGGTGGGATCTTTTACGTGCTCG
ATGTGTGGATGTCCTCAAACATGGGACCTCTATTCAAAATTATATCCGAG
GGAGGTCCGTAGCCGAAGCTAGGTACACTTTCTTTCCTAAGTGAAGTGAG
GAAATTCATGTAAAGGGCCTTTTCCAAGAACACTACGTCAACGGGGCATG
TCAGGATGTGAACCCAGGACTTCTGAGTTTTTGTCAAATACCTTGCCATT
TCCAAAGCGCGACGCCACTTTGTCTCTGCCAGTCCAAACAAATCCTGTTT
AAGAAACCTTCCTGTTGCCACATCTACACAAGTACAAAGAAACAAGATGA
AGTTGACTCCACTAGGTTAGCCTACCATTGCGCTTTTATCTTTTATGTAT
GTTTAACTCGTGTTTTGTCGTCTCTACTTTTATCGTATATGTTTGTTATA
TATTAATACGTTAGACCTCCTGTGCCTAGCCTTTCGAGGCATGAACTAAT
AACTGATAAAGGTATTTTGTTATTTCATTGTATAATTCATGGTGTTTTGA
ACAGATCCTTTCTAGAGTAGCCAAAGTGGTCAAAGTACATCAAAAATGAT
AGGTGTCCCTCATTACTTGCCTTACCTGCCACAAAGCCATTCTACAGCAA
CAGCTTTTTTCCACGAACTGCAAAACTTTGGAATTCCCTCCCAGCCCACT
GCTTTCCCCCCGAATGCAACCTACAAACCTTCAAAACAAACATACACCGT
TGTCTTTCACCTATGCCACATTAGTTCCATTAGTTCAATGCTGAGAAGTG
ACCTCTTACGGCCTTGCATTGACCGAGATCGTTAAAAAATTACTTTCTTA
TACTTAGCGATAGCGACTAGTGCTCCTGGATGTGGAGGTAACTTGACGGT
TCCCCCTGAAGGTACTGTGACATCACCGGGCTATCCCAGTAACTACGGCA
ACGATCAGAGATGTGAGTGGACGATCACCGCACCAGAAGGAAGCAGAGTT
CGTCTCACGTTTGCCAGCTTCCATCTCGATGACGATTATGACTTTTTAAT
CGTCAACGATGGAGGCAGTGGTAGAGCGACACGATTGCAGAGGTAATGGC
CTGAATGACCTACCGTTTTTAATCCCACAACTATAGTCGTCCGACATTGA
TAGTGGAATCAGCTTTCCGCACGGTTGCATGTCTCCCTGCTTGTCTTCGA
ATTGACTATTCCTACCCCCGTACAGACGGTGATAGCGACCGCAAGTAAAC
ACTTACACATGCTTCTGTGGGCCCAGCTAAAACATATTACCTTAGCAACT
TAGTCTTACCGTGCCTTTAAAGATATTTCTCTATTACAAATTAAACCTGA
CTTCAAAATACACTTCATTCCATATTAAACTTGACAAAACTGATTAAAAG
TTCAAATAACACTGCACTTGACCTTCACTGAATGCCATTGTGCCAATATC
TCTAGTTACATAAAACTATACTCTGCCTGTGCATTCACTCAGGAGCCTTG
GTGCACGTACAATAATTTGTCAAACTTTATTTCGGCATTACATCCCCACT
ATTGTCCGTACAAATATTTGGCAAACTATATTTCGGCATTACATCCCCAC
TATTATCCGTACAATTATTGGGCAAACTGTATTTCGGCATTACATCCCCA
CTATTATCCGATGGTAGCATGCCCTGCTTGACAACAACAGACATTTCTTG
TTTGTCGAGCAGTTTGAATGATACTGAGAGTGAATTGATAAAGTCACATG
TACCTGTTAACTTTGAATGTAGAAGCTTCAATATTTTTATGATCACGAAG
CAAGAAAGGTTATTTGTGATTTCCAGCTTAACAGGTGAACTGTCAG Coding sequence (CDS) from alignment at Sc0000599:16649..18994+ >transcript:BL96622_cuf1 ID=transcript:BL96622_cuf1|Name=transcript:BL96622_cuf1|organism=Branchiostoma lanceolatum|type=CDS|length=900bp|location=Sequence derived from alignment at Sc0000599:16649..18994+ (Branchiostoma lanceolatum)
TCTGACGAGAGTGAAACGCGTCAGGGGTTCCAGTTCACCTACACAGCGAT
AGCGACTAGTGCTCCTGGATGTGGAGGTAACTTGACGGTTCCCCCTGAAG
GTACTGTGACATCACCGGGCTATCCCAGTAACTACGGCAACGATCAGAGA
TGTGAGTGGACGATCACCGCACCAGAAGGAAGCAGAGTTCGTCTCACGTT
TGCCAGCTTCCATCTCGATGACGATTATGACTTTTTAATCGTCAACGATG
GAGGCAGTGGTAGAGCGACACGATTGCAGAGCTTAACAGGTGAACTGTCA
TCTGACGAGAGTGAAACGCGTCAGGGGTTCCAGTTCACCTACACAGCGAT
AGCGACTAGTGCTCCTGGATGTGGAGGTAACTTGACGGTTCCCCCTGAAG
GTACTGTGACATCACCGGGCTATCCCAGTAACTACGGCAACGATCAGAGA
TGTGAGTGGACGATCACCGCACCAGAAGGAAGCAGAGTTCGTCTCACGTT
TGCCAGCTTCCATCTCGATGACGATTATGACTTTTTAATCGTCAACGATG
GAGGCAGTGGTAGAGCGACACGATTGCAGAGCTTAACAGGTGAACTGTCA
TCTGACGAGAGTGAAACGCGTCAGGGGTTCCAGTTCACCTACACAGCGAT
AGCGACTAGTGCTCCTGGATGTGGAGGTAACTTGACGGTTCCCCCTGAAG
GTACTGTGACATCACCGGGCTATCCCAGTAACTACGGCAACGATCAGAGA
TGTGAGTGGACGATCACCGCACCAGAAGGAAGCAGAGTTCGTCTCACGTT
TGCCAGCTTCCATCTCGATGACGATTATGACTTTTTAATCGTCAACGATG
GAGGCAGTGGTAGAGCGACACGATTGCAGAGCTTAACAGGTGAACTGTCA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000599 | genome | Sc0000599:16649..18994 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL96622_cuf1 |
| Biotype | protein_coding |
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