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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL96621_cuf0 >transcript:BL96621_cuf0-protein ID=transcript:BL96621_cuf0-protein|Name=transcript:BL96621_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=110bp
SHEMFLRFTSDGWGTRQGFQFTVAEAYSPRCGGNLAVPPEGTVSYPGHYS
THANCEWTITAPDGSYVRLTFASFHVKDTDDSLTIYDGNSGRATQLKSLT
GDMSVYPVTS Run BLAST on NCBI mRNA from alignment at Sc0000599:11191..13960+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL96621_cuf0 ID=transcript:BL96621_cuf0|Name=transcript:BL96621_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=2770bp|location=Sequence derived from alignment at Sc0000599:11191..13960+ (Branchiostoma lanceolatum)
CGTCTCACGAGATGTTTCTGAGGTTTACATCTGACGGGTGGGGAACGCGT
CAGGGGTTCCAGTTCACAGGTAAGGTGTTTAATTACAGGGAGCAAGTTTG
TTTTGTTGCTGATAATTAGAGTACATGTTATGAAATGGCTTCATTTGGGC
TAGAAGTATACACACTAATGTATTTATGAATAAAGAGTGTTAAGTTAAAG
TCACTCTATCAACCATGTTATCAATAAAGTTCTTCATAGTAATAGTTAAT
AGATAAATTCCATATAGAAGCGGAAAGTCACCACCTGCAGCTTAGATGCT
GTTTATATTGTGAGTCAGATCAAGTAAAAGATTAACAGCATTAGACCTAA
GATTGTTGTAAGTTGTATCAGTATTAGCAAGGAATACTTTAGCTGTATAG
AAGATGCTCCATGCTTCGAATATCTAGATGCAACGGATAGATTTGTACTT
TCGATAGGCTCAGACAATATGGCGTCGCGTTTGTGAAATGATTAGGTATT
TGACCGACAACCCAGGGATCCTTGAATCAAATCATGACATGCCCCGGTGA
CACTGTATCCTCGGATAGGGCACTAAACCTAATTTCCTCACTTCATTCAG
AAAGAAAATGAGTACCTAGCTACGGCTAGAGACGTCTCTCTGATATGACG
TTAAATGGAGGTCCCGTGTTTGAGGAGAGCCACACCTCGAGCACGTAAAA
GAATCCACCAAACGTACCTAAAAGAGTAAGGCTTCTTCTCGGCGTGAGTG
GATCAAATATAACTGTCTAGTTATATTTGATGAATATAACCTGAACTGTT
TAGTTAAAAAATGATGTGCGTTCCTTTTTACTTTCTTATGGTTAGTGGCA
GAGGCCTATTCTCCTAGATGTGGAGGTAACCTGGCGGTTCCCCCTGAAGG
TACAGTGAGCTATCCTGGGCACTACAGCACCCATGCTAACTGTGAGTGGA
CGATCACCGCACCAGACGGAAGTTACGTTCGTCTCACGTTTGCCAGCTTC
CACGTCAAGGACACTGATGATTCGCTGACCATCTATGATGGAAACAGTGG
CAGAGCGACACAATTGAAGAGGTTTTTAATCCCACGACTATAGTCGTCCG
ACATTTATAGTGGAATCAGCTTTCCGCACGGCTGCATGCCTCCCTGCTTG
TCTTCGAACTGCCCATTCCTACCCCCGTACAGACCAGGTGATAGCGACCT
CATCTAGACACTAACACAATAGTCACTACTAGCTTCTTTGGAACCAGCTA
GAAAATATTGCAAAAGTTGTCTTGTTTCAAAATATCAGTGTGCGTGAGTG
TGTGTGTCTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATGTGTG
TGTGTGAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG
TGTGTGTGTGTGTTTGTGTTTCTGGATTTTTTTTCGTCTGCATAACTCAA
GGTTGGACTTCTGGTTGGATTACAATGATATTTGGTATGTGGGTAGGTGT
AGGGAAGACATTTAAGGTCAAGGTCAATTTCGGGCTCCCTGGTATGTGAC
CTTAGTACTGCAGTAGAACTTCTTTCTAGATTGCAATGAAAGAAAGAAGT
GGTGATGGTTTTGGCCTCCTACCATCTTGCTCTTGAACTGCCGGGGCGTT
TTGTCAAAATCTTCCAAAAAGAATTACTTGAAAAGGAACAACGAATTTCC
ATGATATCAAGTATGCAGGTAGCTTAGACAGAGATGTACATAATGAAATG
AACTATTGAGGAAAATCTACATTTGCAATGTTCTCTATCATAGGACTCAA
ATACATGTACCGTATTTAGTTTATTGCAGGTGGAACATTAACAAAGACCC
ATTGTGCACATAAATTCCTAATGTGCATGATTAGTGCAAAACTGCCAAAA
TTCTTCAAACTGGTAAAGGTTTATGCTTATTTGCTTATGTTTATCTATTT
CACACTTAAAATTTATAAATACATAACAGAGAAATACAAATGAGAATATA
ACAGGTCAGTGCAAGGGAGGCTGAAAGCGATTTTCTTAATATGTAAAAGC
TTCCCTTAATCAAATCATAACAACTCAAATAAATAAATCAAATCAGAGAA
AAAAGATTAGTGATACATACATAAAGGAATGTACTGTGAATACAGTAAAA
CAAAGAAATCATAACTTGGTCGATCATATATATATCAGTTTTCATTAAAT
GTTTAGCTAAACGAGAGGTAGTAAGAAAATTAAAGAAAGGCAAATCGACT
TAGGAAAATTCGCAACATTATGACCTCTGTAAGTAACTTGAAGGTGTAAA
TGGCCAGGCATAGATTTTTCAAAAGTCATTTTGCACAATTTTCATTGACA
TGTAATATACTTTTTCATCAACAACTTATTCTGTCCCTTTACTTGTTAGA
ATAACTACAGTCAAACTAAAGTTAGAATAACACACATTAAAGCTTACTTT
AAAACAACACAAGCTTTAATCAAACTTCACAAAACTTGTTAAAAGTTCAG
ATAACACTGTCATTGAACTTAAACGAATGCCATTTTGCCAATACGTCTTG
TTGCACACAACTATACTCTGCCAGTACTGCATTTAATCAATAGTAGGGAG
GCCAGCTTTCCTGCAGCTGTTTGTAGAGTAGCGCAGTTTGGATTATCCAT
AAAGTGACTCGTGATGTTAATTGTTAAGATACTTTCTTGGCCGCATCAAC
AGAGCCCAGAACGATTTATCATGTTTTCCAGCTTAACAGGTGACATGTCA
GTCTACCCCGTCACCAGTAC Coding sequence (CDS) from alignment at Sc0000599:11191..13960+ >transcript:BL96621_cuf0 ID=transcript:BL96621_cuf0|Name=transcript:BL96621_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=990bp|location=Sequence derived from alignment at Sc0000599:11191..13960+ (Branchiostoma lanceolatum)
TCTCACGAGATGTTTCTGAGGTTTACATCTGACGGGTGGGGAACGCGTCA
GGGGTTCCAGTTCACAGTGGCAGAGGCCTATTCTCCTAGATGTGGAGGTA
ACCTGGCGGTTCCCCCTGAAGGTACAGTGAGCTATCCTGGGCACTACAGC
ACCCATGCTAACTGTGAGTGGACGATCACCGCACCAGACGGAAGTTACGT
TCGTCTCACGTTTGCCAGCTTCCACGTCAAGGACACTGATGATTCGCTGA
CCATCTATGATGGAAACAGTGGCAGAGCGACACAATTGAAGAGCTTAACA
GGTGACATGTCAGTCTACCCCGTCACCAGTTCTCACGAGATGTTTCTGAG
GTTTACATCTGACGGGTGGGGAACGCGTCAGGGGTTCCAGTTCACAGTGG
CAGAGGCCTATTCTCCTAGATGTGGAGGTAACCTGGCGGTTCCCCCTGAA
GGTACAGTGAGCTATCCTGGGCACTACAGCACCCATGCTAACTGTGAGTG
GACGATCACCGCACCAGACGGAAGTTACGTTCGTCTCACGTTTGCCAGCT
TCCACGTCAAGGACACTGATGATTCGCTGACCATCTATGATGGAAACAGT
GGCAGAGCGACACAATTGAAGAGCTTAACAGGTGACATGTCAGTCTACCC
CGTCACCAGTTCTCACGAGATGTTTCTGAGGTTTACATCTGACGGGTGGG
GAACGCGTCAGGGGTTCCAGTTCACAGTGGCAGAGGCCTATTCTCCTAGA
TGTGGAGGTAACCTGGCGGTTCCCCCTGAAGGTACAGTGAGCTATCCTGG
GCACTACAGCACCCATGCTAACTGTGAGTGGACGATCACCGCACCAGACG
GAAGTTACGTTCGTCTCACGTTTGCCAGCTTCCACGTCAAGGACACTGAT
GATTCGCTGACCATCTATGATGGAAACAGTGGCAGAGCGACACAATTGAA
GAGCTTAACAGGTGACATGTCAGTCTACCCCGTCACCAGT
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000599 | genome | Sc0000599:11191..13960 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL96621_cuf0 |
| Biotype | protein_coding |
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