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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL96618_cuf8 >transcript:BL96618_cuf8-protein ID=transcript:BL96618_cuf8-protein|Name=transcript:BL96618_cuf8|organism=Branchiostoma lanceolatum|type=polypeptide|length=247bp
MAFVVLGLLASVLLWVCSYQVLCLVNSRCSAEWNCRLVTAAHGVLITCLS
YKNGFIDNRWPFTDPGLPNTEYEVQIIMLCLGYFMFDFSWCVYNGTEGIV
MLTHHSASIFGLAAALILGVSGTDVIGVIFGAELTNPFLQLRWFLKETGR
YHTLLAEINDFLFISLFTGVRIGVGGYFWYTEWTNERPLLLFKLGGTALY
TVSWVFMLQIGRFAVRKYTRMYKEWKVKNKSYKRKVSYSNGDVNNVK Run BLAST on NCBI mRNA from alignment at Sc0000000:9592133..9595918- Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL96618_cuf8 ID=transcript:BL96618_cuf8|Name=transcript:BL96618_cuf8|organism=Branchiostoma lanceolatum|type=mRNA|length=3786bp|location=Sequence derived from alignment at Sc0000000:9592133..9595918- (Branchiostoma lanceolatum)
GGTCAACCTAGCAGAAAAGTCAGGTGAGAAGTTTGCATTACCTGTTGTCC
GTTTTGTTGTGACAACTGCTCCAAAACTTTGGGTTTAGGGATAGTAAAGG
AAGAAGGTGATTTGATATCAGCATATTTAGGTCTTTTTGCCTGTCTCTAA
ACGTTGAAATAGGTAAGGTTTAGGCAAAAGACCGGCAAGACATGCAAAAT
TTTCATAATGTAGTGTATATCTTTCTTTGCCGTTTTTTCTTATCCTAACG
GTCTAAGCGTGAACATTCAAATTTAACTGTAACATAACATTATTTTTGAT
CGACCAAATGATGACGTTGATTATGATTTTTGCGTGAACAGTGATAGCGT
ATGTCAAAGGGACCATGTAGGAACAATATGACCGCCCCCCCCTCCCCACT
GTGCACAGTTCTAGTCTTATAATTATAAGTTATATAATTGCCACGCCCAT
GTAACGTTACACATGACTGCTCCATTGAGCCACAGTGGGGATATTTTTCT
GACAATGTTTTGTAGCCATTATCTTGTTTCCATCTATTTCTTCTCTTGGG
TTTGTTCATACCATGATGATGATGATGATGATACCGAGCGCTCTGTCTCC
TCAGCTTTCGCTGCGCTCTATGACTAATTTATCCCCCCTGATGATTGAAC
TTTTATGTTGATACAGGACCCGGACCTAGCCACAATGGCGTTCGTTGTCC
TGGGTCTCCTAGCGAGCGTGTTGCTGTGGGTCTGTTCGTACCAAGTGCTG
TGTCTCGTCAACTCTCGCTGCAGCGCTGAGTGGAACTGTCGCCTAGTCAC
GGCTGCCCATGGCGTCCTCATCACGTGCCTGTCCTACAAGAATGGCTTCA
TAGACAACCGCTGGCCCTTCACTGACCCTGGTCGGTACACTGAATTTTCT
TCATCTTATTTTATCTTTTACTATGGCCACAGCAAATTCAGTCTTCTCAC
TGACTAGTCTGGGGCAATTACAACATTCTTAAATCTGTGAACTATAAAAT
TGAATTGATGTGGCCATGACTCCCATCTAAAAACCAATGCAATGGCCTAG
TCGGTAGAGTGTTCGCCTTGCACACGGTAGGTCGTGAGTTTGATCCCGAC
TGGGTCATAACAATGACTTAAAGACTAGTAGTAGTACCCTGCTGTAGAGT
CGTGCACAAAGTTGTGTGGCCCAAGGGCTGCAAATTGGAGATGACGCGGG
AGGACTTTACTAGTAACTTTAACATGAATCCCCCCTGTTCCATTTCTCAT
CAGGTCTGCCCAACACGGAGTATGAGGTTCAGATCATCATGCTGTGCCTG
GGGTACTTCATGTTCGACTTCTCCTGGTGTGTGTACAACGGGACGGAGGG
GATCGTCATGCTGACTCACCACTCTGCCAGCATCTTTGGACTAGCAGCAG
GTAAGGGATGCAGGGTTATGTCATTTATTATGATTAAGGTTTGGGGTTCT
AATCCCAGCTTGGTGTGTGTACCACAGGACGCAGGGGATCGTCATGCTGA
CTCACCACTCTGCCAGCATCTTTGGACTAGCAGCAGGTAAGGGATGCAGT
GTTATGTCATTTATTATGATTTAGGTTTGGGGTTCTAATCCCATCGCAGC
CTGGTGTGTGTACCGCAGGACAGAGGAGATCGTCATGCTGACCCTCCATT
ATGCCAGCATCTTTGGACTGGCTGCAGGAAATGTACACGAGGTTATACAC
TTAAGGTTCGGGGTTCGAATCCCATCACAGCCTGGTGTGTGTGTACAACG
GGACGGAGGTGATCTTCATGCTGACCCTCCATTATGCCAGCATCTTTGGA
CTGGCTGCAGGAAATGTACACGAGGTTATACACTTAAGGTTCGGGGTTCG
AATCCCATCACAGCCTGGTGTGTGTGTACAACGGGACGGAGGTGATCTTC
ATGCTGACCCTCCATTATGCCAGCATCTTTGGACTGGCTGCAGGTAATGT
ACACGAGGTTGTACACTTTAGGTTTGGGGTTCGAATCCCATCACAGCCTG
GTGTGTGTGTCACGGGACGCAGGGGATTGTCATGCTCACTCACCATTGTG
CCAGTATCTTTGGACAGGCTGCAGGTAATGTACACTCAAAAGTGATAATG
TTGTTTGTGTGTCTCCCTCTTGCAGCTTTAATACTGGGAGTATCGGGTAC
TGACGTGATCGGGGTGATATTCGGAGCCGAGTTGACGAACCCGTTTCTTC
AGTTACGCTGGTTCCTGAAGGAAACCGGACGCTACCACACTCTTCTTGCC
GAAATCAACGACTTTCTTTTCATCAGCCTTTTCACTGGAGTTCGTATCGG
TGTCGGTGGTTATTTCTGGTATACAGAATGGACAAATGAGAGACCGTTGC
TTTTGTTTAAATTAGGGGGAACGGCACTTTATACTGTCAGTTGGGTTTTC
ATGCTGCAAATCGGAAGGTTTGCTGTAAGGAAATACACTAGAATGTATAA
AGAATGGAAAGTGAAAAATAAAAGTTATAAAAGGAAAGTTAGTTATAGTA
ATGGTGATGTTAATAATGTCAAGTGAAATATTGATAATGTAAAAGAATAA
CTTGATTATGCCATGTGAAAATTAATGTCACCAAAAAATCATGTGAAAAA
GGCAGCTGTAGTTTATATGTATATGTTGATCATTGGAAATATTGTATATA
ATTATGAAAATTCTGTACTAAATTTGAAAATCTTGAATGTTGAGAAACTT
TTGTACCAAGAACTATGGTGGAAACGATGGAAACTGATGTTTTTAAACCA
TAATGTTATAAAGATTGATATTTAATACCTAGAAGTGCTTATTATTATAT
TCCACTGAGAAATATACAATTTTAGATTATCTTATGGTCTAAGTGATGGG
TACAAACAGTAATTGACATCAGACCAACATTGACTTTGTACAAGTATAGA
GAAATGCAGTAAGTTCAAGTTATTCATTCCAATGGCAATTCCTTTTGTAT
AAGAGTAGGTAGGTTTGTATAAGAGTAGGTAGGTAAAGGATAAACGAAAC
TCATTGCTGCTTTTTCAACATAGGGTCTTTATGTTTGGATTTGTTACTGT
AGTCACTTTATTGTGAACGTTTTTTTTTTTCTGCCCAATGGTAAGCTGGG
GTGATATAAAAGAACTGACCGCTGATATTAAAGGATCGTCATGTATGACA
GTCTTTGTTTTTGCCACAAGACAGCTGATGTATTTATGACACATGCATGA
TTGCCTATATTGGAATGTCCTTACTTTTCTGTCATACAGTTTTATGTGAC
ATAGGACTGAACAGATTGCAGTACTGCTTCTTAATGATAGGGGGTGTTGC
ATGACTGCTACAAGGGGGGAGCATTCTTTACCCTCTAATATTTTTGGATG
AAGACTCCTGAAACACAGGTATACTAAAGTGGCTGATCTATTGAATTTGC
AGGGAAGTGTGGCACTATATCTGATATTTTTGTGGTTTTTAAAGAAAATC
CAGTTTGAAAGCTGTAAAGGGGAACAGAGCTGAATGTCAAGATGTATGAT
AAAGAATACTGGAAGCTGAAGTTTGTGTATGCTTCAACTCTTTAATTTAA
GAAAAGAAACATGATAATGATAATTATCCAAAAATGAATGCAGTGTGTGA
TGCAGTATGTGTTCTGGAAATAAATTTTGATTTTCGGTTTGAGATTTTGC
TGCTTAAGAGTCTGTGTGGGAAAGAGTAAAGACAAGAGCTCAGGTTATTT
TTATTGAAGGTGCTAATATAATACTTTGCTCTATTGTAACAACAATGTTA
TTGGATTTGTAACAACCTTGCTTGCCTATGAAAAGC Coding sequence (CDS) from alignment at Sc0000000:9592133..9595918- >transcript:BL96618_cuf8 ID=transcript:BL96618_cuf8|Name=transcript:BL96618_cuf8|organism=Branchiostoma lanceolatum|type=CDS|length=2232bp|location=Sequence derived from alignment at Sc0000000:9592133..9595918- (Branchiostoma lanceolatum)
ATGGCGTTCGTTGTCCTGGGTCTCCTAGCGAGCGTGTTGCTGTGGGTCTG
TTCGTACCAAGTGCTGTGTCTCGTCAACTCTCGCTGCAGCGCTGAGTGGA
ACTGTCGCCTAGTCACGGCTGCCCATGGCGTCCTCATCACGTGCCTGTCC
TACAAGAATGGCTTCATAGACAACCGCTGGCCCTTCACTGACCCTGGTCT
GCCCAACACGGAGTATGAGGTTCAGATCATCATGCTGTGCCTGGGGTACT
TCATGTTCGACTTCTCCTGGTGTGTGTACAACGGGACGGAGGGGATCGTC
ATGCTGACTCACCACTCTGCCAGCATCTTTGGACTAGCAGCAGCTTTAAT
ACTGGGAGTATCGGGTACTGACGTGATCGGGGTGATATTCGGAGCCGAGT
TGACGAACCCGTTTCTTCAGTTACGCTGGTTCCTGAAGGAAACCGGACGC
TACCACACTCTTCTTGCCGAAATCAACGACTTTCTTTTCATCAGCCTTTT
CACTGGAGTTCGTATCGGTGTCGGTGGTTATTTCTGGTATACAGAATGGA
CAAATGAGAGACCGTTGCTTTTGTTTAAATTAGGGGGAACGGCACTTTAT
ACTGTCAGTTGGGTTTTCATGCTGCAAATCGGAAGGTTTGCTGTAAGGAA
ATACACTAGAATGTATAAAGAATGGAAAGTGAAAAATAAAAGTTATAAAA
GGAAAGTTAGTTATAGTAATGGTGATGTTAATAATGTCAAGTGAATGGCG
TTCGTTGTCCTGGGTCTCCTAGCGAGCGTGTTGCTGTGGGTCTGTTCGTA
CCAAGTGCTGTGTCTCGTCAACTCTCGCTGCAGCGCTGAGTGGAACTGTC
GCCTAGTCACGGCTGCCCATGGCGTCCTCATCACGTGCCTGTCCTACAAG
AATGGCTTCATAGACAACCGCTGGCCCTTCACTGACCCTGGTCTGCCCAA
CACGGAGTATGAGGTTCAGATCATCATGCTGTGCCTGGGGTACTTCATGT
TCGACTTCTCCTGGTGTGTGTACAACGGGACGGAGGGGATCGTCATGCTG
ACTCACCACTCTGCCAGCATCTTTGGACTAGCAGCAGCTTTAATACTGGG
AGTATCGGGTACTGACGTGATCGGGGTGATATTCGGAGCCGAGTTGACGA
ACCCGTTTCTTCAGTTACGCTGGTTCCTGAAGGAAACCGGACGCTACCAC
ACTCTTCTTGCCGAAATCAACGACTTTCTTTTCATCAGCCTTTTCACTGG
AGTTCGTATCGGTGTCGGTGGTTATTTCTGGTATACAGAATGGACAAATG
AGAGACCGTTGCTTTTGTTTAAATTAGGGGGAACGGCACTTTATACTGTC
AGTTGGGTTTTCATGCTGCAAATCGGAAGGTTTGCTGTAAGGAAATACAC
TAGAATGTATAAAGAATGGAAAGTGAAAAATAAAAGTTATAAAAGGAAAG
TTAGTTATAGTAATGGTGATGTTAATAATGTCAAGTGAATGGCGTTCGTT
GTCCTGGGTCTCCTAGCGAGCGTGTTGCTGTGGGTCTGTTCGTACCAAGT
GCTGTGTCTCGTCAACTCTCGCTGCAGCGCTGAGTGGAACTGTCGCCTAG
TCACGGCTGCCCATGGCGTCCTCATCACGTGCCTGTCCTACAAGAATGGC
TTCATAGACAACCGCTGGCCCTTCACTGACCCTGGTCTGCCCAACACGGA
GTATGAGGTTCAGATCATCATGCTGTGCCTGGGGTACTTCATGTTCGACT
TCTCCTGGTGTGTGTACAACGGGACGGAGGGGATCGTCATGCTGACTCAC
CACTCTGCCAGCATCTTTGGACTAGCAGCAGCTTTAATACTGGGAGTATC
GGGTACTGACGTGATCGGGGTGATATTCGGAGCCGAGTTGACGAACCCGT
TTCTTCAGTTACGCTGGTTCCTGAAGGAAACCGGACGCTACCACACTCTT
CTTGCCGAAATCAACGACTTTCTTTTCATCAGCCTTTTCACTGGAGTTCG
TATCGGTGTCGGTGGTTATTTCTGGTATACAGAATGGACAAATGAGAGAC
CGTTGCTTTTGTTTAAATTAGGGGGAACGGCACTTTATACTGTCAGTTGG
GTTTTCATGCTGCAAATCGGAAGGTTTGCTGTAAGGAAATACACTAGAAT
GTATAAAGAATGGAAAGTGAAAAATAAAAGTTATAAAAGGAAAGTTAGTT
ATAGTAATGGTGATGTTAATAATGTCAAGTGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000000 | genome | Sc0000000:9592133..9595918 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL96618_cuf8 |
| Biotype | protein_coding |
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