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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL96611_cuf40 >transcript:BL96611_cuf40-protein ID=transcript:BL96611_cuf40-protein|Name=transcript:BL96611_cuf40|organism=Branchiostoma lanceolatum|type=polypeptide|length=132bp
IICLYTQDQSDDFNWRWDSGGTSSGSTGPAVDHTYGTAAGHYMYTEASSP
RTPGDVARLMTHLYLNNTLGQCLDFWYHMYGNQIGTLNIYARTGSTMSNV
LWSMSADQGNQWNRAQVDLPVDAVYQVVFEGV Run BLAST on NCBI mRNA from alignment at Sc0000000:3187826..3189782- Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL96611_cuf40 ID=transcript:BL96611_cuf40|Name=transcript:BL96611_cuf40|organism=Branchiostoma lanceolatum|type=mRNA|length=1957bp|location=Sequence derived from alignment at Sc0000000:3187826..3189782- (Branchiostoma lanceolatum)
ACATAATCTGCCTGTACACCCAAGATCAAAGTGACGACTTCAACTGGAGA
TGGGACAGTGGTGGCACCTCGTCAGGCAGCACTGGGCCTGCTGTGGACCA
CACCTATGGAACTGCAGCAGGTAGGGGGCACTGTTGATAGTTGAAAGCAT
TCACAAGGACAGGCTGAAAACACAAACGTATATAAACAGGACCTTGCAGT
ATTGGTGGTAGCTTATTATGTTATGTTATATTTCTGTCGACAGGACATTA
CATGTACACAGAGGCCTCTGGCCCGACTGTACATAGCATCTGTCTTCTCT
GTCACAACCGGTGGAAGAATATCTCTTCAGTGATCTGAACAAACTGGTTC
AAGATTACTTTCTGTTTCAGATAGGACCCACCTCATGCTAGGCTCACATT
TCCAAACCAGGGCCCATGTTTGCAGAAATGAAATGTCTATCAATAGATAT
TGACAAGCTTTGTTCTTAAATAAATTTTGGTACTTTTCGCATTTTTTCTT
GTCTTTTAAACCATACTTTTTGTCCCCCAAGACTGCCCGGCCGGTTCTGG
ATTGGAAATGTGACCCTAGCATCAGAACCTATAAAAACTTACATGTAAAT
TTTGATCTTTCCATCTATAGGACATTACATGTACACAGAGGCCTCCAGCC
CACGGACGCCAGGTGACGTGGCCCGTCTGATGACCCACCTGTACCTGAAC
AACACCTTAGGACAATGTCTGGACTTCTGGTACCACATGTACGGGAATCA
AATAGGTCAGTGTGTGGGCTTACATTTTGTGTGTAACATTTTCAAAATTG
TCATATATTTTCACAACTCATGGTTAGGCCACACCAATTTAATTTCTTGG
TAAACGGATTTTTATTTTCCCAAAAAAAATTCTAGAAAAAAAATTCATGA
AAACAGAAGGCTGTTTTTTTTCTAAATTTTCTTTTTTGGGGGAGGGGGGG
AATGAAAATCTGTTAACCAGGAAATTAAATTGGTGTGGCCTTATGATGCA
CCAGTCACAAAGTAGAATAATTGATCGTTTGACAAGTAAGCAAAGCTCTA
GATGGCATTTTTGGCAGTTTCACCAGCGCACCTATTTCCATAAATGAATT
TAGAGCCCTGTGTATGCTATAGAATAGATCGACAGTATTCTGTTGATCAT
CGCATAGTTTTAGACATCAAGCAAGTCCTCGAACCCCATCCAATGCGATA
GAGTAGATTTTCAGATGAAATGTGCTAACATGAGCAAGTAAATGTTATCA
TCATATAGATATATTCAGAATATTTCTAGTTTTAACGTTCTGAAATTGCT
TTGGGCTCCTTTAATCTCTTCATGTCTGTGTTTCCAGGCACCCTGAACAT
CTATGCCAGGACTGGAAGCACCATGAGCAACGTGCTGTGGTCCATGTCAG
CTGACCAGGGCAACCAGTGGAACCGTGCACAGGTAAATTATCATTCTTAC
ACTCATACATTCATTCGTTCATTCCTTCCATCCTTCATTCATTGCATTGA
TTCACCCTCCATTTATGTATTTGTTTGTGCACATCTTTATTCATTTGTTT
GTTCACTCATTCATAATTTTAGAATTTCATTCATTCATTCATTCATTAAT
TCATTCATTTGATCATTTAATAATGGATTTTATTTTTTCAGTCAGTCAGT
CAGTCAGTCATTCATTCATTTATCCATATTTTTGTGCATTCATTCACCTA
TTTAACAAATGAATGTACATTCGTTCCATTAATTCAATCAATCAATTGAT
CAACCAACCAACCAACCAATCAACCAACCAACCAAACAACCAACCAACCA
ACCGATCAAACCATCAATACATCGATGGGTCGATCGATTGATCAATCAAT
CAACCAATCAACCAATCAACCAACCAATCAATCATGTATTTATCCGTTCC
TTGTGCAGGTGGACCTCCCTGTGGATGCTGTGTACCAGGTGGTGTTTGAG
GGGGTGG Coding sequence (CDS) from alignment at Sc0000000:3187826..3189782- >transcript:BL96611_cuf40 ID=transcript:BL96611_cuf40|Name=transcript:BL96611_cuf40|organism=Branchiostoma lanceolatum|type=CDS|length=1980bp|location=Sequence derived from alignment at Sc0000000:3187826..3189782- (Branchiostoma lanceolatum)
ATAATCTGCCTGTACACCCAAGATCAAAGTGACGACTTCAACTGGAGATG
GGACAGTGGTGGCACCTCGTCAGGCAGCACTGGGCCTGCTGTGGACCACA
CCTATGGAACTGCAGCAGGACATTACATGTACACAGAGGCCTCCAGCCCA
CGGACGCCAGGTGACGTGGCCCGTCTGATGACCCACCTGTACCTGAACAA
CACCTTAGGACAATGTCTGGACTTCTGGTACCACATGTACGGGAATCAAA
TAGGCACCCTGAACATCTATGCCAGGACTGGAAGCACCATGAGCAACGTG
CTGTGGTCCATGTCAGCTGACCAGGGCAACCAGTGGAACCGTGCACAGGT
GGACCTCCCTGTGGATGCTGTGTACCAGGTGGTGTTTGAGGGGGTGATAA
TCTGCCTGTACACCCAAGATCAAAGTGACGACTTCAACTGGAGATGGGAC
AGTGGTGGCACCTCGTCAGGCAGCACTGGGCCTGCTGTGGACCACACCTA
TGGAACTGCAGCAGGACATTACATGTACACAGAGGCCTCCAGCCCACGGA
CGCCAGGTGACGTGGCCCGTCTGATGACCCACCTGTACCTGAACAACACC
TTAGGACAATGTCTGGACTTCTGGTACCACATGTACGGGAATCAAATAGG
CACCCTGAACATCTATGCCAGGACTGGAAGCACCATGAGCAACGTGCTGT
GGTCCATGTCAGCTGACCAGGGCAACCAGTGGAACCGTGCACAGGTGGAC
CTCCCTGTGGATGCTGTGTACCAGGTGGTGTTTGAGGGGGTGATAATCTG
CCTGTACACCCAAGATCAAAGTGACGACTTCAACTGGAGATGGGACAGTG
GTGGCACCTCGTCAGGCAGCACTGGGCCTGCTGTGGACCACACCTATGGA
ACTGCAGCAGGACATTACATGTACACAGAGGCCTCCAGCCCACGGACGCC
AGGTGACGTGGCCCGTCTGATGACCCACCTGTACCTGAACAACACCTTAG
GACAATGTCTGGACTTCTGGTACCACATGTACGGGAATCAAATAGGCACC
CTGAACATCTATGCCAGGACTGGAAGCACCATGAGCAACGTGCTGTGGTC
CATGTCAGCTGACCAGGGCAACCAGTGGAACCGTGCACAGGTGGACCTCC
CTGTGGATGCTGTGTACCAGGTGGTGTTTGAGGGGGTGATAATCTGCCTG
TACACCCAAGATCAAAGTGACGACTTCAACTGGAGATGGGACAGTGGTGG
CACCTCGTCAGGCAGCACTGGGCCTGCTGTGGACCACACCTATGGAACTG
CAGCAGGACATTACATGTACACAGAGGCCTCCAGCCCACGGACGCCAGGT
GACGTGGCCCGTCTGATGACCCACCTGTACCTGAACAACACCTTAGGACA
ATGTCTGGACTTCTGGTACCACATGTACGGGAATCAAATAGGCACCCTGA
ACATCTATGCCAGGACTGGAAGCACCATGAGCAACGTGCTGTGGTCCATG
TCAGCTGACCAGGGCAACCAGTGGAACCGTGCACAGGTGGACCTCCCTGT
GGATGCTGTGTACCAGGTGGTGTTTGAGGGGGTGATAATCTGCCTGTACA
CCCAAGATCAAAGTGACGACTTCAACTGGAGATGGGACAGTGGTGGCACC
TCGTCAGGCAGCACTGGGCCTGCTGTGGACCACACCTATGGAACTGCAGC
AGGACATTACATGTACACAGAGGCCTCCAGCCCACGGACGCCAGGTGACG
TGGCCCGTCTGATGACCCACCTGTACCTGAACAACACCTTAGGACAATGT
CTGGACTTCTGGTACCACATGTACGGGAATCAAATAGGCACCCTGAACAT
CTATGCCAGGACTGGAAGCACCATGAGCAACGTGCTGTGGTCCATGTCAG
CTGACCAGGGCAACCAGTGGAACCGTGCACAGGTGGACCTCCCTGTGGAT
GCTGTGTACCAGGTGGTGTTTGAGGGGGTG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000000 | genome | Sc0000000:3187826..3189782 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL96611_cuf40 |
| Biotype | protein_coding |
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