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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL96609_cuf36 >transcript:BL96609_cuf36-protein ID=transcript:BL96609_cuf36-protein|Name=transcript:BL96609_cuf36|organism=Branchiostoma lanceolatum|type=polypeptide|length=141bp
GDLKVFYVPTQSGSFPAPLWELSGDQGDHWYLGQVTVPGDQAFYVEFEAV
RGQSFRGDIAIDDVTVRDGACSDPGSCDFENGPCTYTNDANDDFDWTENR
GTTGSSGTGPTTDHTTGTAQGTYYYLETSSPRQPGDVARFV Run BLAST on NCBI mRNA from alignment at Sc0000000:3167787..3169537- Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL96609_cuf36 ID=transcript:BL96609_cuf36|Name=transcript:BL96609_cuf36|organism=Branchiostoma lanceolatum|type=mRNA|length=1751bp|location=Sequence derived from alignment at Sc0000000:3167787..3169537- (Branchiostoma lanceolatum)
TTGGGGACCTGAAGGTCTTCTACGTCCCAACTCAATCTGGCAGCTTCCCG
GCTCCACTATGGGAGGTATGCTGTCTCTCCTTGAATGGATACTGAAGTGA
ATTTTTCACATCTAATATTCAGTTGTTCATCTTTATTGTTTACAAAATAT
TTACTAGATATCTCAAAGTGTGAACCGGTAGTGTGAACGATACATGTTGA
TTTATTTGTGTTCATTTATTTCAATGAATAAACTTGTACAAACACAAGTA
GGTTAATTTGTATATGCTTGCTTGTTTATATGTACAATTCCTAAAGACCT
TACAAAAGTCAGTGCACTAAGACTTGTTTTGCCAAAAAATATTGCTATTC
TAAATTCTCCTTGCTGTTTTTAAAAAACATCACCATTGTTTTTCAACAAA
ACTCAGACAGAAACAAATTTTGAATATCCATACCCAACCCCCTCAGCTGT
CTGGAGACCAGGGTGACCACTGGTACCTGGGACAGGTCACAGTTCCGGGC
GACCAGGCCTTCTACGTGGAGTTCGAGGCTGTTCGAGGACAGAGTTTCCG
TGGAGATATCGCCATTGACGACGTGACTGTCAGAGATGGAGCATGTAGCG
ACCCAGGTAAGGCCATACAAATTTAATTTTTTGGGTTCTCCGACATTTTG
ATGTATTTGTTTATTCATTCATTCATTTATTTATTTAATCTTTAAACATC
TGGGTGGCCTTTTCAGCCATAAGCTGATGTCCAAGGGGGCCCAGAGACAC
ATGACATTAAACAAATGGGGAAACACAAATGTAAGACATTATGAAAGCAG
AGGGCTGGCTGCGAAACTGGCATCTGACTGTTCACTCCCTCACTGACGAA
AGATTATAGCAGATGCTGTCTGAAACGCCTGACTGTTTCAAAAATTTTAT
CCAGTTGCTTGAGTAACTGTCTTTTGGCGTATCTTATTAGCTGGATGTCT
AACCTTCATCGGCGCTCTTCCAATTAGTGATTTAGTGACCATGCATGAAT
TAATCATCATGACATTTATTTCTACCATCTTCAGGATCGTGTGACTTTGA
GAATGGACCCTGCACTTACACCAACGACGCCAACGATGACTTTGACTGGA
CCGAGAACAGAGGGACTACAGGCAGCAGTGGAACTGGCCCTACCACAGAC
CACACCACCGGAACTGCACAAGGTAAACGGGACAAAACGATTTTATGAAC
TTAAGATTTAAGATTTTGCAGGTTTAATGAATTTTACTTCAGAATCATTT
ATGTCTCGGGTCCATCTTTCTCTTTCTTTTAATCTCCCTTATCATGGGTA
CTCAATTTTCTTGCTTCTATCAGTCTTTGTTGTCTTAATTCATCTGCTTT
CTTTTTTGTTTATCCTCTATTTTTCTAGTCATAGAGTTCTGCACAACCCA
CCCTACTGTGTCCATTTATCAGATATTACCTTTGTTCTGGATAAACGTAT
AATTTATGTTTACATGATGGGTTTTGGAATTTTAGTCAAAGTATGACAAT
CATGTTATGTGAATCGAGTTTGCAAACGACTTCCAGCATTTACAAAACAG
CAAGAGACTAAGCAAGAAAAGTAGAGTACCAAATTAAAAGATAAAAGTGT
CATCATGTATAAATTTATTAAAATTCATGTCAACCTACATGTATCGCAGA
AACTTATGAAGCTAATTGTGATTTTATCCCTTTTTCAGGTACCTACTACT
ACCTTGAGACCTCATCACCAAGGCAACCCGGCGACGTGGCCCGCTTTGTC
A Coding sequence (CDS) from alignment at Sc0000000:3167787..3169537- >transcript:BL96609_cuf36 ID=transcript:BL96609_cuf36|Name=transcript:BL96609_cuf36|organism=Branchiostoma lanceolatum|type=CDS|length=1692bp|location=Sequence derived from alignment at Sc0000000:3167787..3169537- (Branchiostoma lanceolatum)
GGGGACCTGAAGGTCTTCTACGTCCCAACTCAATCTGGCAGCTTCCCGGC
TCCACTATGGGAGCTGTCTGGAGACCAGGGTGACCACTGGTACCTGGGAC
AGGTCACAGTTCCGGGCGACCAGGCCTTCTACGTGGAGTTCGAGGCTGTT
CGAGGACAGAGTTTCCGTGGAGATATCGCCATTGACGACGTGACTGTCAG
AGATGGAGCATGTAGCGACCCAGGATCGTGTGACTTTGAGAATGGACCCT
GCACTTACACCAACGACGCCAACGATGACTTTGACTGGACCGAGAACAGA
GGGACTACAGGCAGCAGTGGAACTGGCCCTACCACAGACCACACCACCGG
AACTGCACAAGGTACCTACTACTACCTTGAGACCTCATCACCAAGGCAAC
CCGGCGACGTGGCCCGCTTTGTCGGGGACCTGAAGGTCTTCTACGTCCCA
ACTCAATCTGGCAGCTTCCCGGCTCCACTATGGGAGCTGTCTGGAGACCA
GGGTGACCACTGGTACCTGGGACAGGTCACAGTTCCGGGCGACCAGGCCT
TCTACGTGGAGTTCGAGGCTGTTCGAGGACAGAGTTTCCGTGGAGATATC
GCCATTGACGACGTGACTGTCAGAGATGGAGCATGTAGCGACCCAGGATC
GTGTGACTTTGAGAATGGACCCTGCACTTACACCAACGACGCCAACGATG
ACTTTGACTGGACCGAGAACAGAGGGACTACAGGCAGCAGTGGAACTGGC
CCTACCACAGACCACACCACCGGAACTGCACAAGGTACCTACTACTACCT
TGAGACCTCATCACCAAGGCAACCCGGCGACGTGGCCCGCTTTGTCGGGG
ACCTGAAGGTCTTCTACGTCCCAACTCAATCTGGCAGCTTCCCGGCTCCA
CTATGGGAGCTGTCTGGAGACCAGGGTGACCACTGGTACCTGGGACAGGT
CACAGTTCCGGGCGACCAGGCCTTCTACGTGGAGTTCGAGGCTGTTCGAG
GACAGAGTTTCCGTGGAGATATCGCCATTGACGACGTGACTGTCAGAGAT
GGAGCATGTAGCGACCCAGGATCGTGTGACTTTGAGAATGGACCCTGCAC
TTACACCAACGACGCCAACGATGACTTTGACTGGACCGAGAACAGAGGGA
CTACAGGCAGCAGTGGAACTGGCCCTACCACAGACCACACCACCGGAACT
GCACAAGGTACCTACTACTACCTTGAGACCTCATCACCAAGGCAACCCGG
CGACGTGGCCCGCTTTGTCGGGGACCTGAAGGTCTTCTACGTCCCAACTC
AATCTGGCAGCTTCCCGGCTCCACTATGGGAGCTGTCTGGAGACCAGGGT
GACCACTGGTACCTGGGACAGGTCACAGTTCCGGGCGACCAGGCCTTCTA
CGTGGAGTTCGAGGCTGTTCGAGGACAGAGTTTCCGTGGAGATATCGCCA
TTGACGACGTGACTGTCAGAGATGGAGCATGTAGCGACCCAGGATCGTGT
GACTTTGAGAATGGACCCTGCACTTACACCAACGACGCCAACGATGACTT
TGACTGGACCGAGAACAGAGGGACTACAGGCAGCAGTGGAACTGGCCCTA
CCACAGACCACACCACCGGAACTGCACAAGGTACCTACTACTACCTTGAG
ACCTCATCACCAAGGCAACCCGGCGACGTGGCCCGCTTTGTC
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000000 | genome | Sc0000000:3167787..3169537 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL96609_cuf36 |
| Biotype | protein_coding |
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