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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL96608_cuf35 >transcript:BL96608_cuf35-protein ID=transcript:BL96608_cuf35-protein|Name=transcript:BL96608_cuf35|organism=Branchiostoma lanceolatum|type=polypeptide|length=191bp
YHMYGTHVDTLNVYVQTGPALDTAVWTRTGTQGDQWFEGLVQVNNGGQYN
LVFEGTRGASYRGDIALDDVTFVPGDCPQVVVTPAPSSAPTTQTCDFENQ
NLCGYTQDGTDDFDWTWSTGGTGTTSTGPSADHTYGTAAGHYMYTETSSP
RVPGDIARLISPTFQSSVNSYCAEFWYHLYGQHIGSLNVYT Run BLAST on NCBI mRNA from alignment at Sc0000000:3163514..3165201- Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL96608_cuf35 ID=transcript:BL96608_cuf35|Name=transcript:BL96608_cuf35|organism=Branchiostoma lanceolatum|type=mRNA|length=1688bp|location=Sequence derived from alignment at Sc0000000:3163514..3165201- (Branchiostoma lanceolatum)
GGTACCACATGTACGGCACACACGTGGACACACTGAACGTGTACGTACAG
ACTGGACCGGCTCTGGACACTGCTGTTTGGACTCGGACCGGCACACAGGG
AGACCAGTGGTTTGAAGGACTGGTGCAGGTTAACAATGGTGGCCAGTACA
ATGTGAGTTTGTTTGTTTATTTATTTAGAATACCCATTAGTAACATGCAT
CATTTACTTACTACTACTACCAGTACCAGTACTCCTGGATCCCTGAGTAC
TTGTCTGATAATATATGCAAAGTTGAATACCATTATGAACATAAGATAAA
GAATTTGATAAGGGACATGTACAATTTCAAGTGCCTATAGCTAGGAGCAG
AAGTTGATATAAACAATATTTCCTTACCTTGTCTACAGCTGGTGTTTGAG
GGTACAAGGGGAGCGTCCTACAGAGGCGACATTGCTCTGGATGATGTCAC
TTTTGTGCCTGGTGACTGTCCTCAAGGTATGTATAGAAATCAAGCCAATC
CTAGGCTGGTGTTGAAAATTTACATTTCTTAACCTTTAGCACACTGAAGT
AGCCATTTGGCTACAAATTCTCTATTGGTTATGGGGTTAGGCAGCAGGGA
GAAAGTTAAGGTAGTGCTGATGTTTTTTACTTACACACTCAAGACCATAT
GGTATCATCTATAATTCCCATCTTGCAGGGTTAGATATTCTTACGCTTCA
GCTAAGGTTTCATGGCAGATCTTCAGATATTGTTGTCTTGTAGATTGACA
AATGTGCCAAATCTTTTACTTAAACAGCATGTAGATTTGAAGTATTAAAA
ATATCAACTACTCAGTGTCTTCCAATTTTTTAATGAACTTCAAGTATCTC
TTCTATCCTTTTTCAGTTTTTCTAAAATGAAGTTGATCTGATTGGTCTCA
GATAAAAGAACAACAATCAGATCAGAAATTACAGTTGAATTAGTACATTG
TCAAGCAGCTGTTTTGACTGTTTTCCCGCAGTTGTGGTGACCCCTGCCCC
CAGCTCGGCCCCTACAACCCAGACGTGTGATTTTGAGAACCAGAACCTTT
GTGGGTACACCCAGGACGGCACGGATGACTTCGACTGGACATGGTCGACT
GGCGGCACAGGCACAACCAGTACTGGACCTAGTGCTGATCACACCTATGG
CACTGCAGCAGGTATGTGGGAGAATTTCTTTGAATTCAATGTATCTGAAA
CTGGTTTTACTGAGTGATTACAGTGTGCAAATAAGTGATTTGGATAGTCC
CATCCTCAACATTAAAAAAGACACCAGGGAAGACAGAAATGTTGCAATAA
GCCCTATGCATTGTCATCTTTCTTTAGATTACTTTTGTCTGACCCTTCCA
GCATCATACCAATAGATACATGTACATTGTATTTGATCATGACTTTAGAA
CATTATGGTACTTTGCATGGTACAGTTTAGCCTTGTTCTGCATAACGGCT
ACAGCTTTTTTTGTGAATAAATGTAACAGTTACTGCTGTAAACAAACAAC
AAGTAAACAAACTTGTCTGCGCCACTTCCAGGTCACTACATGTACACAGA
GACCTCCAGTCCTCGCGTTCCTGGCGACATAGCTCGGTTGATCTCTCCCA
CGTTCCAAAGCTCAGTGAACTCCTACTGCGCTGAGTTCTGGTACCATCTG
TACGGACAGCACATCGGATCACTGAACGTCTACACAAG Coding sequence (CDS) from alignment at Sc0000000:3163514..3165201- >transcript:BL96608_cuf35 ID=transcript:BL96608_cuf35|Name=transcript:BL96608_cuf35|organism=Branchiostoma lanceolatum|type=CDS|length=2292bp|location=Sequence derived from alignment at Sc0000000:3163514..3165201- (Branchiostoma lanceolatum)
TACCACATGTACGGCACACACGTGGACACACTGAACGTGTACGTACAGAC
TGGACCGGCTCTGGACACTGCTGTTTGGACTCGGACCGGCACACAGGGAG
ACCAGTGGTTTGAAGGACTGGTGCAGGTTAACAATGGTGGCCAGTACAAT
CTGGTGTTTGAGGGTACAAGGGGAGCGTCCTACAGAGGCGACATTGCTCT
GGATGATGTCACTTTTGTGCCTGGTGACTGTCCTCAAGTTGTGGTGACCC
CTGCCCCCAGCTCGGCCCCTACAACCCAGACGTGTGATTTTGAGAACCAG
AACCTTTGTGGGTACACCCAGGACGGCACGGATGACTTCGACTGGACATG
GTCGACTGGCGGCACAGGCACAACCAGTACTGGACCTAGTGCTGATCACA
CCTATGGCACTGCAGCAGGTCACTACATGTACACAGAGACCTCCAGTCCT
CGCGTTCCTGGCGACATAGCTCGGTTGATCTCTCCCACGTTCCAAAGCTC
AGTGAACTCCTACTGCGCTGAGTTCTGGTACCATCTGTACGGACAGCACA
TCGGATCACTGAACGTCTACACATACCACATGTACGGCACACACGTGGAC
ACACTGAACGTGTACGTACAGACTGGACCGGCTCTGGACACTGCTGTTTG
GACTCGGACCGGCACACAGGGAGACCAGTGGTTTGAAGGACTGGTGCAGG
TTAACAATGGTGGCCAGTACAATCTGGTGTTTGAGGGTACAAGGGGAGCG
TCCTACAGAGGCGACATTGCTCTGGATGATGTCACTTTTGTGCCTGGTGA
CTGTCCTCAAGTTGTGGTGACCCCTGCCCCCAGCTCGGCCCCTACAACCC
AGACGTGTGATTTTGAGAACCAGAACCTTTGTGGGTACACCCAGGACGGC
ACGGATGACTTCGACTGGACATGGTCGACTGGCGGCACAGGCACAACCAG
TACTGGACCTAGTGCTGATCACACCTATGGCACTGCAGCAGGTCACTACA
TGTACACAGAGACCTCCAGTCCTCGCGTTCCTGGCGACATAGCTCGGTTG
ATCTCTCCCACGTTCCAAAGCTCAGTGAACTCCTACTGCGCTGAGTTCTG
GTACCATCTGTACGGACAGCACATCGGATCACTGAACGTCTACACATACC
ACATGTACGGCACACACGTGGACACACTGAACGTGTACGTACAGACTGGA
CCGGCTCTGGACACTGCTGTTTGGACTCGGACCGGCACACAGGGAGACCA
GTGGTTTGAAGGACTGGTGCAGGTTAACAATGGTGGCCAGTACAATCTGG
TGTTTGAGGGTACAAGGGGAGCGTCCTACAGAGGCGACATTGCTCTGGAT
GATGTCACTTTTGTGCCTGGTGACTGTCCTCAAGTTGTGGTGACCCCTGC
CCCCAGCTCGGCCCCTACAACCCAGACGTGTGATTTTGAGAACCAGAACC
TTTGTGGGTACACCCAGGACGGCACGGATGACTTCGACTGGACATGGTCG
ACTGGCGGCACAGGCACAACCAGTACTGGACCTAGTGCTGATCACACCTA
TGGCACTGCAGCAGGTCACTACATGTACACAGAGACCTCCAGTCCTCGCG
TTCCTGGCGACATAGCTCGGTTGATCTCTCCCACGTTCCAAAGCTCAGTG
AACTCCTACTGCGCTGAGTTCTGGTACCATCTGTACGGACAGCACATCGG
ATCACTGAACGTCTACACATACCACATGTACGGCACACACGTGGACACAC
TGAACGTGTACGTACAGACTGGACCGGCTCTGGACACTGCTGTTTGGACT
CGGACCGGCACACAGGGAGACCAGTGGTTTGAAGGACTGGTGCAGGTTAA
CAATGGTGGCCAGTACAATCTGGTGTTTGAGGGTACAAGGGGAGCGTCCT
ACAGAGGCGACATTGCTCTGGATGATGTCACTTTTGTGCCTGGTGACTGT
CCTCAAGTTGTGGTGACCCCTGCCCCCAGCTCGGCCCCTACAACCCAGAC
GTGTGATTTTGAGAACCAGAACCTTTGTGGGTACACCCAGGACGGCACGG
ATGACTTCGACTGGACATGGTCGACTGGCGGCACAGGCACAACCAGTACT
GGACCTAGTGCTGATCACACCTATGGCACTGCAGCAGGTCACTACATGTA
CACAGAGACCTCCAGTCCTCGCGTTCCTGGCGACATAGCTCGGTTGATCT
CTCCCACGTTCCAAAGCTCAGTGAACTCCTACTGCGCTGAGTTCTGGTAC
CATCTGTACGGACAGCACATCGGATCACTGAACGTCTACACA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000000 | genome | Sc0000000:3163514..3165201 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL96608_cuf35 |
| Biotype | protein_coding |
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