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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL96592_cuf9 >transcript:BL96592_cuf9-protein ID=transcript:BL96592_cuf9-protein|Name=transcript:BL96592_cuf9|organism=Branchiostoma lanceolatum|type=polypeptide|length=154bp
SSTQLDEMWSLSGDQGDQWQQAFITLRSDQTYTLILEGTVGTSHTGDISL
DDVEVTNGECTVCDTKTTDDQFRYRWDLPPVTGSRFEFEVQASSDVHVAL
SAQNQNLNDMYEVVIGGWGNTQSVIRTPTAGHQVTAQTQGINSPTQYRGF
WISW Run BLAST on NCBI mRNA from alignment at Sc0000000:3102560..3104719- Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL96592_cuf9 ID=transcript:BL96592_cuf9|Name=transcript:BL96592_cuf9|organism=Branchiostoma lanceolatum|type=mRNA|length=2160bp|location=Sequence derived from alignment at Sc0000000:3102560..3104719- (Branchiostoma lanceolatum)
TCATCGACCCAGCTGGACGAGATGTGGTCGCTAAGCGGTGACCAGGGTGA
CCAATGGCAGCAGGCCTTTATCACACTCAGGAGTGACCAGACCTACACGG
TACGTTCAGAAAATTCATGGCTATTCTGACTTGTACTTCTACAATGTCAT
GCAAAAACAACTATATAGAATGATATTCTATATAGAATATAACTTAGGTC
TCTTATTAGCACAACCTCAGGCTGTCCTGTTTGGTTTGACTAATATAAAT
CATGTTTGAAGCAAGCAAAAAATTCAGGGAGGCACAAGCTTTTAAGTTTG
TGGTTTGAATAAATGAATAAATAGATAAATAACAATGAAGCTAGAATAAG
TGTGTCTTTTTTTATCCTTGTGTGGTTCAATATTGGTACAGACAGCTCTG
AAAATGCTTTGTTCTCTGTAGAGCCCAGGAGTTTTTATTCCATTTTTAGG
CACACCAATTTAATTTCTTGGTTAACGGATTTTTATTTTCAAAAAAAAAA
AAAATTTTAGAAAAAAAAAATCCATGAAAATAGAAGGCTGGGCCAGCCTT
CTGTTTTCATGATTTTTTTTTCTAAATTCTTTTTTTGTGAAAATAAAAAT
CCGTTAACCAAGAAATTAAATTGGTGTGGCCTTATGCGGAGTTTTGAATG
AACGTTCTCACATTGATACACTTTCTGTCCCAACAGCTGATCCTGGAGGG
CACTGTTGGCACCAGCCATACTGGAGACATCTCGCTGGATGATGTTGAGG
TGACCAACGGAGAGTGTACAGGTCAGTAAGTTGTCGTATGACTGTATTAC
AATGTAATCACCCAGTATACACCACTTAGCACACAAGCCTCAAGAGCACA
TAGTCACTTTCTTTATAAAGCTTTGGTTCTTGTAGAATTACAACTTTAAA
AATGTGAGAAGTACCCTGTAGTTAGGTGGAAATTACATGTAGTACCTAGA
TCCATAGTGGCTGTATGGTATTCTACAATGTAAATCATACTAATTAGGAA
CCAAAAGATCCGTTCTTTCAGGTCCTTCTAGTGCCTGGTGCAACGTAGTG
CAGCAAGTTTCCTTGCTGCTTCAGTAGCAGGGTAATACTATATTTTTACA
GGGAGGGGTTGCTAGCCCTTCCCGTTTACAGGCACTTCCTCGAGCACCAG
ACACCCATTTACATCCCTTACAACAAACAAAAGATACCGGACTAAAATTA
GTGTTTTCTGTTGTTTCTACAGTGTGTGACACAAAGACTACAGACGACCA
GTTCCGGTACCGATGGGACCTTCCGCCTGTCACAGGGTCAAGGTTCGAGT
TCGAAGTCCAGGCCAGTAGCGACGTTCACGTGGCGCTGTCGGCACAGAAC
CAGAATCTCAACGACATGTACGAAGTCGTGATTGGCGGTTGGGGTAACAC
GCAGTCTGTCATCAGGACTCCTACCGCAGGACACCAAGTTACGGCCCAAA
CACAAGGTAGGTTGTTACCTTTGCCAGAAGGTTATGTTTTCGGTTTTTTT
ATATGCTTTGCCTTTACGGGATTTAATACATACAGATCCAGAATAAGAAG
ACACTGCAAGAACTTACTGAGTCTACTGAGGGCAGAGCAGGACCGTTGCG
GTCAGAAAGAAAACTAGGGGGGGGTAAGGAAGCTTGCGACGAGCCGGACA
AAGTGGAGAGAATTCAGAAGAAAGACTGAATGCAGCTGCAGGGTGTTCAG
ACCACTGCAGCAGCAGAACACAGTGGACTACTATGCTTGAGTGGCTGTGA
ATGTGTATCTACATGTACAGAGATCAACTCATTTTGTACAATCTACTTGT
AGAAAAATTACTGTCCAGAAATTGAAGTAGCAGAAATGACCAAAAACGAA
TGGACACAGACCACGAACCATTTTTTGCCATATGTTTTGTACCGTGTATG
TAATCATATATGTTGATATATATAGAGTCTGACTTAAATGATGACCATAT
TGTAATTTGTATCTTTATCATATTTCATCTGACCCTTACCTCTTCCCTCA
TGACCTCAATGAAAAGTGGCTTGGATGCAGATTTGAGCTTCTCATGAATA
ACCAAAAGGTTCAAACAAACAATTACAGTGTAACTGTAGCAGTGTGTCTC
AATTGTTTTGCCACAGGCATTAACTCTCCAACCCAGTACCGAGGGTTCTG
GATATCCTGG Coding sequence (CDS) from alignment at Sc0000000:3102560..3104719- >transcript:BL96592_cuf9 ID=transcript:BL96592_cuf9|Name=transcript:BL96592_cuf9|organism=Branchiostoma lanceolatum|type=CDS|length=1848bp|location=Sequence derived from alignment at Sc0000000:3102560..3104719- (Branchiostoma lanceolatum)
TCATCGACCCAGCTGGACGAGATGTGGTCGCTAAGCGGTGACCAGGGTGA
CCAATGGCAGCAGGCCTTTATCACACTCAGGAGTGACCAGACCTACACGC
TGATCCTGGAGGGCACTGTTGGCACCAGCCATACTGGAGACATCTCGCTG
GATGATGTTGAGGTGACCAACGGAGAGTGTACAGTGTGTGACACAAAGAC
TACAGACGACCAGTTCCGGTACCGATGGGACCTTCCGCCTGTCACAGGGT
CAAGGTTCGAGTTCGAAGTCCAGGCCAGTAGCGACGTTCACGTGGCGCTG
TCGGCACAGAACCAGAATCTCAACGACATGTACGAAGTCGTGATTGGCGG
TTGGGGTAACACGCAGTCTGTCATCAGGACTCCTACCGCAGGACACCAAG
TTACGGCCCAAACACAAGGCATTAACTCTCCAACCCAGTACCGAGGGTTC
TGGATATCCTGGTCATCGACCCAGCTGGACGAGATGTGGTCGCTAAGCGG
TGACCAGGGTGACCAATGGCAGCAGGCCTTTATCACACTCAGGAGTGACC
AGACCTACACGCTGATCCTGGAGGGCACTGTTGGCACCAGCCATACTGGA
GACATCTCGCTGGATGATGTTGAGGTGACCAACGGAGAGTGTACAGTGTG
TGACACAAAGACTACAGACGACCAGTTCCGGTACCGATGGGACCTTCCGC
CTGTCACAGGGTCAAGGTTCGAGTTCGAAGTCCAGGCCAGTAGCGACGTT
CACGTGGCGCTGTCGGCACAGAACCAGAATCTCAACGACATGTACGAAGT
CGTGATTGGCGGTTGGGGTAACACGCAGTCTGTCATCAGGACTCCTACCG
CAGGACACCAAGTTACGGCCCAAACACAAGGCATTAACTCTCCAACCCAG
TACCGAGGGTTCTGGATATCCTGGTCATCGACCCAGCTGGACGAGATGTG
GTCGCTAAGCGGTGACCAGGGTGACCAATGGCAGCAGGCCTTTATCACAC
TCAGGAGTGACCAGACCTACACGCTGATCCTGGAGGGCACTGTTGGCACC
AGCCATACTGGAGACATCTCGCTGGATGATGTTGAGGTGACCAACGGAGA
GTGTACAGTGTGTGACACAAAGACTACAGACGACCAGTTCCGGTACCGAT
GGGACCTTCCGCCTGTCACAGGGTCAAGGTTCGAGTTCGAAGTCCAGGCC
AGTAGCGACGTTCACGTGGCGCTGTCGGCACAGAACCAGAATCTCAACGA
CATGTACGAAGTCGTGATTGGCGGTTGGGGTAACACGCAGTCTGTCATCA
GGACTCCTACCGCAGGACACCAAGTTACGGCCCAAACACAAGGCATTAAC
TCTCCAACCCAGTACCGAGGGTTCTGGATATCCTGGTCATCGACCCAGCT
GGACGAGATGTGGTCGCTAAGCGGTGACCAGGGTGACCAATGGCAGCAGG
CCTTTATCACACTCAGGAGTGACCAGACCTACACGCTGATCCTGGAGGGC
ACTGTTGGCACCAGCCATACTGGAGACATCTCGCTGGATGATGTTGAGGT
GACCAACGGAGAGTGTACAGTGTGTGACACAAAGACTACAGACGACCAGT
TCCGGTACCGATGGGACCTTCCGCCTGTCACAGGGTCAAGGTTCGAGTTC
GAAGTCCAGGCCAGTAGCGACGTTCACGTGGCGCTGTCGGCACAGAACCA
GAATCTCAACGACATGTACGAAGTCGTGATTGGCGGTTGGGGTAACACGC
AGTCTGTCATCAGGACTCCTACCGCAGGACACCAAGTTACGGCCCAAACA
CAAGGCATTAACTCTCCAACCCAGTACCGAGGGTTCTGGATATCCTGG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000000 | genome | Sc0000000:3102560..3104719 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL96592_cuf9 |
| Biotype | protein_coding |
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