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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL96568_cuf9 >transcript:BL96568_cuf9-protein ID=transcript:BL96568_cuf9-protein|Name=transcript:BL96568_cuf9|organism=Branchiostoma lanceolatum|type=polypeptide|length=314bp
QSFTPVDMVFLLDGSGSVTAPNFELVKDFTQDVIRNFNVSTSATRVGVVQ
FSDTVRTEFFLNTFQTKNQVLQAVDGLGYLQGNTLTGAAIDFVRTSTFST
PAGNRPGQPDFLVVVTDGLSQDNVAVPAQTARNNGISIFAVGIGSEVDTD
TLLQIAGNPARILQINDFAGLINAEEQLTSIVCNISFCGDPGAPANGFRL
GEFFTGSTVTFGCNAGFILQGDTNALCLENGQWNNPVPVCVAVTTIPPTT
TPAPISVCSSITPVDLVFLLDGSSSITSPNFQIVKDFTADVVRTFNVSSA
ATNVGLVQYSDTIR Run BLAST on NCBI mRNA from alignment at Sc0000000:4905049..4906615- Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL96568_cuf9 ID=transcript:BL96568_cuf9|Name=transcript:BL96568_cuf9|organism=Branchiostoma lanceolatum|type=mRNA|length=1567bp|location=Sequence derived from alignment at Sc0000000:4905049..4906615- (Branchiostoma lanceolatum)
GTCAGAGCTTCACCCCAGTCGACATGGTTTTCCTGCTGGATGGCTCCGGT
AGCGTCACAGCACCCAACTTCGAACTTGTGAAGGATTTCACACAGGACGT
CATCAGAAACTTCAACGTGTCAACCTCTGCCACGAGAGTCGGCGTGGTTC
AGTTCAGCGACACCGTCCGCACAGAGTTCTTCCTCAACACCTTCCAGACC
AAGAACCAGGTGCTTCAGGCGGTCGACGGCCTCGGTTACCTTCAGGGGAA
CACGCTTACCGGCGCGGCCATCGATTTTGTCCGCACTAGCACCTTTTCGA
CGCCGGCGGGCAACCGGCCAGGCCAGCCCGACTTCCTCGTTGTGGTCACC
GACGGCCTGTCGCAGGACAACGTCGCCGTCCCTGCGCAGACTGCACGCAA
CAACGGTATCTCCATCTTCGCGGTGGGTATCGGGAGTGAAGTGGACACGG
ACACCTTGCTCCAGATCGCGGGAAATCCTGCCAGAATCCTGCAGATTAAC
GACTTTGCTGGGCTCATCAATGCTGAGGAGCAGCTTACCAGTATTGTCTG
CAACAGTAAGTACATTGCGTGGAACATGTGATTTGATATTTTCCTAATCT
TATCTTCTCACAATAATGACTAATCTAATTCTATGCCAATGCTACATTCA
AACTACAATGCTTCCAAGGCTTTGAAGTTCAAGTAGATGGGTATAGAAAT
CATGAATTATTTAAAGCTGTATTGTGCTTCTAAGTAATACTCTAATTATC
TTCTGTTCTGAATGCTTGCCAACTAGATGAAATACCTCTCAATGGTGAGT
AACAATTGTATGGAATACGTCAATCAATTGTCTCATTATAATTTGTGAGT
AAAAGTGAATGAAGACAATCTTAAGAGAAAGCATCTTTTTGATAATACAT
TCGATTCGTTTAGTTTGAAATAACAATCACTAATCAGTACAGTAACAATA
ACTGTAGGGAGGCAATTTGCATATTTGAAGTTGAACAGGCATGTAGTGCA
TGCCTTGTGTTTTTCCTTTATGCTATTATCATCAACCTGATTGTGTTCTT
GCACACAGTCTCTTTCTGCGGCGACCCTGGAGCTCCTGCTAACGGTTTCC
GACTCGGAGAGTTCTTCACTGGTAGCACTGTCACATTTGGGTGCAATGCC
GGCTTCATCCTCCAGGGGGATACAAACGCGCTCTGTCTTGAGAATGGACA
GTGGAACAACCCTGTACCTGTGTGTGTAGGTACGTAAAGAGAAGTTGTTC
TGTAGATGTTTGCACGGATGCACATAGATTTTTTTTGCCTACATGAAACA
CTCGACTAACTTTTGAATAATCCTTCTATTCTCTTTCCTCATCTCAGCCG
TCACCACAATTCCACCTACCACGACCCCCGCCCCCATCTCAGTCTGCAGC
AGCATCACCCCTGTTGACCTGGTCTTCCTGCTGGACGGCTCCAGTAGCAT
CACATCACCCAACTTCCAGATCGTCAAAGACTTCACTGCTGACGTGGTCA
GAACCTTCAATGTGTCGTCTGCTGCCACCAACGTTGGGCTGGTCCAGTAC
AGCGACACCATCCGGAC Coding sequence (CDS) from alignment at Sc0000000:4905049..4906615- >transcript:BL96568_cuf9 ID=transcript:BL96568_cuf9|Name=transcript:BL96568_cuf9|organism=Branchiostoma lanceolatum|type=CDS|length=2826bp|location=Sequence derived from alignment at Sc0000000:4905049..4906615- (Branchiostoma lanceolatum)
CAGAGCTTCACCCCAGTCGACATGGTTTTCCTGCTGGATGGCTCCGGTAG
CGTCACAGCACCCAACTTCGAACTTGTGAAGGATTTCACACAGGACGTCA
TCAGAAACTTCAACGTGTCAACCTCTGCCACGAGAGTCGGCGTGGTTCAG
TTCAGCGACACCGTCCGCACAGAGTTCTTCCTCAACACCTTCCAGACCAA
GAACCAGGTGCTTCAGGCGGTCGACGGCCTCGGTTACCTTCAGGGGAACA
CGCTTACCGGCGCGGCCATCGATTTTGTCCGCACTAGCACCTTTTCGACG
CCGGCGGGCAACCGGCCAGGCCAGCCCGACTTCCTCGTTGTGGTCACCGA
CGGCCTGTCGCAGGACAACGTCGCCGTCCCTGCGCAGACTGCACGCAACA
ACGGTATCTCCATCTTCGCGGTGGGTATCGGGAGTGAAGTGGACACGGAC
ACCTTGCTCCAGATCGCGGGAAATCCTGCCAGAATCCTGCAGATTAACGA
CTTTGCTGGGCTCATCAATGCTGAGGAGCAGCTTACCAGTATTGTCTGCA
ACATCTCTTTCTGCGGCGACCCTGGAGCTCCTGCTAACGGTTTCCGACTC
GGAGAGTTCTTCACTGGTAGCACTGTCACATTTGGGTGCAATGCCGGCTT
CATCCTCCAGGGGGATACAAACGCGCTCTGTCTTGAGAATGGACAGTGGA
ACAACCCTGTACCTGTGTGTGTAGCCGTCACCACAATTCCACCTACCACG
ACCCCCGCCCCCATCTCAGTCTGCAGCAGCATCACCCCTGTTGACCTGGT
CTTCCTGCTGGACGGCTCCAGTAGCATCACATCACCCAACTTCCAGATCG
TCAAAGACTTCACTGCTGACGTGGTCAGAACCTTCAATGTGTCGTCTGCT
GCCACCAACGTTGGGCTGGTCCAGTACAGCGACACCATCCGGCAGAGCTT
CACCCCAGTCGACATGGTTTTCCTGCTGGATGGCTCCGGTAGCGTCACAG
CACCCAACTTCGAACTTGTGAAGGATTTCACACAGGACGTCATCAGAAAC
TTCAACGTGTCAACCTCTGCCACGAGAGTCGGCGTGGTTCAGTTCAGCGA
CACCGTCCGCACAGAGTTCTTCCTCAACACCTTCCAGACCAAGAACCAGG
TGCTTCAGGCGGTCGACGGCCTCGGTTACCTTCAGGGGAACACGCTTACC
GGCGCGGCCATCGATTTTGTCCGCACTAGCACCTTTTCGACGCCGGCGGG
CAACCGGCCAGGCCAGCCCGACTTCCTCGTTGTGGTCACCGACGGCCTGT
CGCAGGACAACGTCGCCGTCCCTGCGCAGACTGCACGCAACAACGGTATC
TCCATCTTCGCGGTGGGTATCGGGAGTGAAGTGGACACGGACACCTTGCT
CCAGATCGCGGGAAATCCTGCCAGAATCCTGCAGATTAACGACTTTGCTG
GGCTCATCAATGCTGAGGAGCAGCTTACCAGTATTGTCTGCAACATCTCT
TTCTGCGGCGACCCTGGAGCTCCTGCTAACGGTTTCCGACTCGGAGAGTT
CTTCACTGGTAGCACTGTCACATTTGGGTGCAATGCCGGCTTCATCCTCC
AGGGGGATACAAACGCGCTCTGTCTTGAGAATGGACAGTGGAACAACCCT
GTACCTGTGTGTGTAGCCGTCACCACAATTCCACCTACCACGACCCCCGC
CCCCATCTCAGTCTGCAGCAGCATCACCCCTGTTGACCTGGTCTTCCTGC
TGGACGGCTCCAGTAGCATCACATCACCCAACTTCCAGATCGTCAAAGAC
TTCACTGCTGACGTGGTCAGAACCTTCAATGTGTCGTCTGCTGCCACCAA
CGTTGGGCTGGTCCAGTACAGCGACACCATCCGGCAGAGCTTCACCCCAG
TCGACATGGTTTTCCTGCTGGATGGCTCCGGTAGCGTCACAGCACCCAAC
TTCGAACTTGTGAAGGATTTCACACAGGACGTCATCAGAAACTTCAACGT
GTCAACCTCTGCCACGAGAGTCGGCGTGGTTCAGTTCAGCGACACCGTCC
GCACAGAGTTCTTCCTCAACACCTTCCAGACCAAGAACCAGGTGCTTCAG
GCGGTCGACGGCCTCGGTTACCTTCAGGGGAACACGCTTACCGGCGCGGC
CATCGATTTTGTCCGCACTAGCACCTTTTCGACGCCGGCGGGCAACCGGC
CAGGCCAGCCCGACTTCCTCGTTGTGGTCACCGACGGCCTGTCGCAGGAC
AACGTCGCCGTCCCTGCGCAGACTGCACGCAACAACGGTATCTCCATCTT
CGCGGTGGGTATCGGGAGTGAAGTGGACACGGACACCTTGCTCCAGATCG
CGGGAAATCCTGCCAGAATCCTGCAGATTAACGACTTTGCTGGGCTCATC
AATGCTGAGGAGCAGCTTACCAGTATTGTCTGCAACATCTCTTTCTGCGG
CGACCCTGGAGCTCCTGCTAACGGTTTCCGACTCGGAGAGTTCTTCACTG
GTAGCACTGTCACATTTGGGTGCAATGCCGGCTTCATCCTCCAGGGGGAT
ACAAACGCGCTCTGTCTTGAGAATGGACAGTGGAACAACCCTGTACCTGT
GTGTGTAGCCGTCACCACAATTCCACCTACCACGACCCCCGCCCCCATCT
CAGTCTGCAGCAGCATCACCCCTGTTGACCTGGTCTTCCTGCTGGACGGC
TCCAGTAGCATCACATCACCCAACTTCCAGATCGTCAAAGACTTCACTGC
TGACGTGGTCAGAACCTTCAATGTGTCGTCTGCTGCCACCAACGTTGGGC
TGGTCCAGTACAGCGACACCATCCGG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000000 | genome | Sc0000000:4905049..4906615 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL96568_cuf9 |
| Biotype | protein_coding |
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