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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL96566_cuf3 >transcript:BL96566_cuf3-protein ID=transcript:BL96566_cuf3-protein|Name=transcript:BL96566_cuf3|organism=Branchiostoma lanceolatum|type=polypeptide|length=272bp
ANFPYGGLDLVFLLDGSGSVGTTNFELVKDFTSEVVLNFNISADTTNVGV
VQYSDTVRNEFFLSSYDTKLPLIDAINQISYLTGGTLTGFAIDYVRQSSF
SRPAGARNTFPDVLVVLTDGLSQDNVVSSAAAARSQGITIFAVGIGSEVD
FTTLLQISGYPSRILQIQDFATLVTEGRRLPDIVCQSTYCDDPGTPVNGY
RRGGFFEDSVVTFGCNDGYLLIGEATTTCLGDGQWSNAVPVCQDVCDPNP
CLNGGTCQPTGTTSRCLCPNRY Run BLAST on NCBI mRNA from alignment at Sc0000000:4876442..4878332- Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL96566_cuf3 ID=transcript:BL96566_cuf3|Name=transcript:BL96566_cuf3|organism=Branchiostoma lanceolatum|type=mRNA|length=1891bp|location=Sequence derived from alignment at Sc0000000:4876442..4878332- (Branchiostoma lanceolatum)
GCAAACTTCCCCTATGGTGGGCTGGACCTGGTCTTCCTTCTGGATGGCTC
CGGTAGTGTCGGCACCACCAACTTTGAACTTGTGAAGGACTTCACCTCAG
AGGTCGTGCTGAACTTCAACATCTCTGCCGACACCACCAACGTCGGCGTC
GTGCAATACAGCGACACCGTACGCAACGAGTTCTTCCTCAGCAGCTACGA
CACCAAACTGCCACTCATCGACGCCATCAATCAAATCAGCTACCTCACCG
GCGGCACTTTGACAGGATTCGCCATCGACTACGTACGTCAGAGCAGCTTC
TCGCGCCCCGCCGGCGCCCGCAACACGTTCCCTGACGTCCTTGTCGTGCT
AACGGATGGTTTGTCGCAGGACAATGTGGTTAGTTCGGCAGCAGCAGCGA
GGAGCCAGGGCATCACGATCTTTGCTGTCGGTATCGGAAGCGAGGTGGAC
TTCACCACACTTCTGCAGATCTCTGGCTACCCGTCGAGAATCCTCCAGAT
TCAGGACTTTGCAACTTTGGTCACGGAGGGACGCAGGCTTCCCGACATCG
TCTGCCAGTGTAAGCAACATTCCCAACAGTAGAGTTTTGATTACAAAATG
CACATTAAGTAAATATCCCTCTGTAGGGCAGTGCCTCACCTGCATGTTAA
TAGCCCTTGAGCCACACATTTGTGCAAGCACAATAGCAGTGGGCTATAGC
TTAAGTCCACTGGCAGCGTTAACTACAATGTATTTGAGACTAGCTTGAGA
GTAATTTTCCAATATCGTTCTACAGCGACCTATTGTGATGACCCTGGCAC
GCCGGTGAACGGGTACCGGCGCGGTGGGTTCTTTGAGGACAGTGTGGTGA
CGTTCGGCTGTAACGACGGATACCTCCTGATCGGTGAAGCCACCACCACC
TGTCTGGGGGATGGTCAGTGGAGTAACGCAGTTCCCGTCTGCCAGGGTAA
GGAAATAGATGGATTCTTGTGTACACCCGTGACCTCTTTTCCACTAGAGG
CTGGGACGGCTGAGCGACCAATGAGCAAAGTATTTGATAGACAAAGAGCA
AATTTCTTTTTGGTGTCTTTGATATCATCCCTTTGCATGTGCATCCTTTT
TCAATTTGGTTGCTCAATGGTTGCTGAACGATTGCAGTCTATACATAGCT
AGTGGAAAGGAAGCTATAGCACTTATACTTTAACAGACAATATCTCAGCC
AAAGCTAAGGATTTCACCTGTACCAATTACCAATCTTGATATGTCTTGTA
GACTCATGCTTATGATAAAGGTCTTGTCTGATGATTAATATTCTTTCTCA
TAATGACTGAATCTTGACTAACAAAATGATCTGACAAAGATTCAAATTTC
TTATCCTTAGTATGTCTGTTTGCTAAATCATTTTCTCTTTTACTTCTTAA
TTCTGTACAGCAATAATTACAACTCTACCTCCAGGTATGTGTTCCTGAAA
AAATCAATCACTGTAATCACTGTAATCACAAGCTCTTATGCTAATGGTAT
ATGTTACACCATGTGTCATGATGCTTAATATCACTGCTAATAACAAACAC
TGCACTGTGCACGTTTTCTTTCTTGTTAAACAGCAATGGTGGAGGGTGCA
GCAATGGTGGCCTGAGTGCAGCTTTGTGCATGTAGCTCTTTGTGCATGTG
TGAAGCTTTGTTTGCAGCTGTGTGTGCGAAGCTGTGTGTGTGTGCAGTTG
CGGGTGCCAGAGACCAAAAATATGCTTTGCTAACTCTTTTTGGTGCTTTT
ATCAAGCAGTATCTGTTGTGTAACGTTACATCTGATTTTGCGTCCCTCTC
CACAGATGTGTGTGATCCCAACCCCTGTCTGAATGGTGGAACATGCCAGC
CTACAGGCACCACCAGCAGGTGCCTGTGTCCCAATAGGTAC Coding sequence (CDS) from alignment at Sc0000000:4876442..4878332- >transcript:BL96566_cuf3 ID=transcript:BL96566_cuf3|Name=transcript:BL96566_cuf3|organism=Branchiostoma lanceolatum|type=CDS|length=2448bp|location=Sequence derived from alignment at Sc0000000:4876442..4878332- (Branchiostoma lanceolatum)
GCAAACTTCCCCTATGGTGGGCTGGACCTGGTCTTCCTTCTGGATGGCTC
CGGTAGTGTCGGCACCACCAACTTTGAACTTGTGAAGGACTTCACCTCAG
AGGTCGTGCTGAACTTCAACATCTCTGCCGACACCACCAACGTCGGCGTC
GTGCAATACAGCGACACCGTACGCAACGAGTTCTTCCTCAGCAGCTACGA
CACCAAACTGCCACTCATCGACGCCATCAATCAAATCAGCTACCTCACCG
GCGGCACTTTGACAGGATTCGCCATCGACTACGTACGTCAGAGCAGCTTC
TCGCGCCCCGCCGGCGCCCGCAACACGTTCCCTGACGTCCTTGTCGTGCT
AACGGATGGTTTGTCGCAGGACAATGTGGTTAGTTCGGCAGCAGCAGCGA
GGAGCCAGGGCATCACGATCTTTGCTGTCGGTATCGGAAGCGAGGTGGAC
TTCACCACACTTCTGCAGATCTCTGGCTACCCGTCGAGAATCCTCCAGAT
TCAGGACTTTGCAACTTTGGTCACGGAGGGACGCAGGCTTCCCGACATCG
TCTGCCAGTCGACCTATTGTGATGACCCTGGCACGCCGGTGAACGGGTAC
CGGCGCGGTGGGTTCTTTGAGGACAGTGTGGTGACGTTCGGCTGTAACGA
CGGATACCTCCTGATCGGTGAAGCCACCACCACCTGTCTGGGGGATGGTC
AGTGGAGTAACGCAGTTCCCGTCTGCCAGGATGTGTGTGATCCCAACCCC
TGTCTGAATGGTGGAACATGCCAGCCTACAGGCACCACCAGCAGGTGCCT
GTGTCCCAATAGGTACGCAAACTTCCCCTATGGTGGGCTGGACCTGGTCT
TCCTTCTGGATGGCTCCGGTAGTGTCGGCACCACCAACTTTGAACTTGTG
AAGGACTTCACCTCAGAGGTCGTGCTGAACTTCAACATCTCTGCCGACAC
CACCAACGTCGGCGTCGTGCAATACAGCGACACCGTACGCAACGAGTTCT
TCCTCAGCAGCTACGACACCAAACTGCCACTCATCGACGCCATCAATCAA
ATCAGCTACCTCACCGGCGGCACTTTGACAGGATTCGCCATCGACTACGT
ACGTCAGAGCAGCTTCTCGCGCCCCGCCGGCGCCCGCAACACGTTCCCTG
ACGTCCTTGTCGTGCTAACGGATGGTTTGTCGCAGGACAATGTGGTTAGT
TCGGCAGCAGCAGCGAGGAGCCAGGGCATCACGATCTTTGCTGTCGGTAT
CGGAAGCGAGGTGGACTTCACCACACTTCTGCAGATCTCTGGCTACCCGT
CGAGAATCCTCCAGATTCAGGACTTTGCAACTTTGGTCACGGAGGGACGC
AGGCTTCCCGACATCGTCTGCCAGTCGACCTATTGTGATGACCCTGGCAC
GCCGGTGAACGGGTACCGGCGCGGTGGGTTCTTTGAGGACAGTGTGGTGA
CGTTCGGCTGTAACGACGGATACCTCCTGATCGGTGAAGCCACCACCACC
TGTCTGGGGGATGGTCAGTGGAGTAACGCAGTTCCCGTCTGCCAGGATGT
GTGTGATCCCAACCCCTGTCTGAATGGTGGAACATGCCAGCCTACAGGCA
CCACCAGCAGGTGCCTGTGTCCCAATAGGTACGCAAACTTCCCCTATGGT
GGGCTGGACCTGGTCTTCCTTCTGGATGGCTCCGGTAGTGTCGGCACCAC
CAACTTTGAACTTGTGAAGGACTTCACCTCAGAGGTCGTGCTGAACTTCA
ACATCTCTGCCGACACCACCAACGTCGGCGTCGTGCAATACAGCGACACC
GTACGCAACGAGTTCTTCCTCAGCAGCTACGACACCAAACTGCCACTCAT
CGACGCCATCAATCAAATCAGCTACCTCACCGGCGGCACTTTGACAGGAT
TCGCCATCGACTACGTACGTCAGAGCAGCTTCTCGCGCCCCGCCGGCGCC
CGCAACACGTTCCCTGACGTCCTTGTCGTGCTAACGGATGGTTTGTCGCA
GGACAATGTGGTTAGTTCGGCAGCAGCAGCGAGGAGCCAGGGCATCACGA
TCTTTGCTGTCGGTATCGGAAGCGAGGTGGACTTCACCACACTTCTGCAG
ATCTCTGGCTACCCGTCGAGAATCCTCCAGATTCAGGACTTTGCAACTTT
GGTCACGGAGGGACGCAGGCTTCCCGACATCGTCTGCCAGTCGACCTATT
GTGATGACCCTGGCACGCCGGTGAACGGGTACCGGCGCGGTGGGTTCTTT
GAGGACAGTGTGGTGACGTTCGGCTGTAACGACGGATACCTCCTGATCGG
TGAAGCCACCACCACCTGTCTGGGGGATGGTCAGTGGAGTAACGCAGTTC
CCGTCTGCCAGGATGTGTGTGATCCCAACCCCTGTCTGAATGGTGGAACA
TGCCAGCCTACAGGCACCACCAGCAGGTGCCTGTGTCCCAATAGGTAC
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000000 | genome | Sc0000000:4876442..4878332 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL96566_cuf3 |
| Biotype | protein_coding |
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