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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL96557_cuf0 >transcript:BL96557_cuf0-protein ID=transcript:BL96557_cuf0-protein|Name=transcript:BL96557_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=208bp
GTGWEVIGPERFVQISVGRVGMWAVSNTSTVMYRVGTYGDEETAGLRWQE
VPIDSVNNDLFNFEKISLFDFERTSRRSTWAHEIDWIHAGKNLVWVIGTY
SSFLLGDTIVRKGISSETPDGKTWQVAEAANMREISTSSRTGQLWAVEWS
GKVWRSPFYCEISAKYDWESFNGCYRSISVGRAGVWAVDNFGGVYHRAGT
FLNETSPG Run BLAST on NCBI mRNA from alignment at Sc0000047:1647233..1648742+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL96557_cuf0 ID=transcript:BL96557_cuf0|Name=transcript:BL96557_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=1510bp|location=Sequence derived from alignment at Sc0000047:1647233..1648742+ (Branchiostoma lanceolatum)
TAGGAACTGGATGGGAAGTAATCGGTCCGGAAAGGTTTGTGCAGATCTCA
GTTGGACGTGTTGGAATGTGGGCAGTCTCTAATACCTCTACTGTAATGTA
CCGCGTAGGAACGTACGGGTGAGTAGTAGATGTGTCACCCTTGTACTCCT
TTTTACACTCTACAACTTTGTATTGAAAATTCAACGGCAACTCTCATGCT
TTTGCTCGGTACCCCAAGACCACCACCTTACCAAAACGATTGTTGAAAGA
TAGTAGTTGTAAAGGTCCTGGTGATCCTGGTGATCCTTCCACTCGTGTCC
TAGTCTTGGCTTGAAGATAGTTACTGTTTGCGTAGTGATCTTGTTCCATA
CTAGAATAACTCTTGCAGGGAAGAAGTTAGCCCTCGGGCCCTTGGAATCC
CGGACTTGGTACTTGTAAGGGTGCCCCGTAGTGCTTGTTGCGAGACTAGG
CATGGATTTATACACGCATTTCCGAGTGTACTTGGAAACACGTGTGTAAA
CCCAGCCTTAATGCAGCATCAGCAAACCACGTGGTATGCACACTTCAGAC
TTCCAGGTGTTTGAAGATATTCTTAATTCAAGACGACGATAACACCGTTT
TTTAACGTGTCTGCCTTAGGGTATCCTGTGGAGTTTTGAGAGTTGTCGTT
AGTTGCTGTAAAGTAAGGAAGTTTTCTGTTTACAGGGACGAGGAAACAGC
GGGCCTCCGATGGCAAGAAGTACCTATCGACTCGGTCAACAATGATCTCT
TCAACTTTGAGAAAATATCACTCTTCGACTTTGAGAGAACATCACGGAGG
TCTACATGGGCTCACGAGATAGACTGGATACATGCAGGAAAGAATCTCGT
CTGGGTCATTGGGACCTACTCTTCTTTTTTACTTGGAGACACCATTGTCA
GGAAAGGTACTGAGCTATTGTCACATAATCTTAAGGGAATGAGATAGATA
ATGGGGTTCAATGCAGACTCCTATGTCAATGGGGTATATCTACGAATGAA
GTCGAAAGACTCGCACCCAGGGTATAACTGCTTTATCTACTTGGTCTTCA
CAGGCATTAGCTCAGAAACACCTGATGGGAAAACATGGCAAGTGGCAGAA
GCAGCAAATATGAGAGAAATCAGCACCAGCTCCAGAACTGGACAGCTGTG
GGCGGTTGAATGGAGCGGAAAAGTGTGGCGTTCGCCTTTCTACTGTGAAA
TTTCAGGTACAATAACAAGACTCCATACAATCAGCACAGTCAGTATAGTC
ATGAAGTACGCATTTCTAAATGATATATGATGTAGTAATAAATATTCTGC
ACGTTTCCCCCCAGTAGGTTGTTCACTTGTTTGGTGTCGAGACATTCCTG
GTTTTTTATCTTTTTTATTTTCTAGCGAAGTACGACTGGGAATCATTTAA
TGGCTGCTACAGGTCAATATCGGTGGGACGTGCAGGAGTTTGGGCGGTGG
ACAATTTCGGCGGTGTGTATCACAGAGCAGGGACGTTTTTGAACGAAACA
TCCCCTGGTG Coding sequence (CDS) from alignment at Sc0000047:1647233..1648742+ >transcript:BL96557_cuf0 ID=transcript:BL96557_cuf0|Name=transcript:BL96557_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=2496bp|location=Sequence derived from alignment at Sc0000047:1647233..1648742+ (Branchiostoma lanceolatum)
GGAACTGGATGGGAAGTAATCGGTCCGGAAAGGTTTGTGCAGATCTCAGT
TGGACGTGTTGGAATGTGGGCAGTCTCTAATACCTCTACTGTAATGTACC
GCGTAGGAACGTACGGGGACGAGGAAACAGCGGGCCTCCGATGGCAAGAA
GTACCTATCGACTCGGTCAACAATGATCTCTTCAACTTTGAGAAAATATC
ACTCTTCGACTTTGAGAGAACATCACGGAGGTCTACATGGGCTCACGAGA
TAGACTGGATACATGCAGGAAAGAATCTCGTCTGGGTCATTGGGACCTAC
TCTTCTTTTTTACTTGGAGACACCATTGTCAGGAAAGGCATTAGCTCAGA
AACACCTGATGGGAAAACATGGCAAGTGGCAGAAGCAGCAAATATGAGAG
AAATCAGCACCAGCTCCAGAACTGGACAGCTGTGGGCGGTTGAATGGAGC
GGAAAAGTGTGGCGTTCGCCTTTCTACTGTGAAATTTCAGCGAAGTACGA
CTGGGAATCATTTAATGGCTGCTACAGGTCAATATCGGTGGGACGTGCAG
GAGTTTGGGCGGTGGACAATTTCGGCGGTGTGTATCACAGAGCAGGGACG
TTTTTGAACGAAACATCCCCTGGTGGAACTGGATGGGAAGTAATCGGTCC
GGAAAGGTTTGTGCAGATCTCAGTTGGACGTGTTGGAATGTGGGCAGTCT
CTAATACCTCTACTGTAATGTACCGCGTAGGAACGTACGGGGACGAGGAA
ACAGCGGGCCTCCGATGGCAAGAAGTACCTATCGACTCGGTCAACAATGA
TCTCTTCAACTTTGAGAAAATATCACTCTTCGACTTTGAGAGAACATCAC
GGAGGTCTACATGGGCTCACGAGATAGACTGGATACATGCAGGAAAGAAT
CTCGTCTGGGTCATTGGGACCTACTCTTCTTTTTTACTTGGAGACACCAT
TGTCAGGAAAGGCATTAGCTCAGAAACACCTGATGGGAAAACATGGCAAG
TGGCAGAAGCAGCAAATATGAGAGAAATCAGCACCAGCTCCAGAACTGGA
CAGCTGTGGGCGGTTGAATGGAGCGGAAAAGTGTGGCGTTCGCCTTTCTA
CTGTGAAATTTCAGCGAAGTACGACTGGGAATCATTTAATGGCTGCTACA
GGTCAATATCGGTGGGACGTGCAGGAGTTTGGGCGGTGGACAATTTCGGC
GGTGTGTATCACAGAGCAGGGACGTTTTTGAACGAAACATCCCCTGGTGG
AACTGGATGGGAAGTAATCGGTCCGGAAAGGTTTGTGCAGATCTCAGTTG
GACGTGTTGGAATGTGGGCAGTCTCTAATACCTCTACTGTAATGTACCGC
GTAGGAACGTACGGGGACGAGGAAACAGCGGGCCTCCGATGGCAAGAAGT
ACCTATCGACTCGGTCAACAATGATCTCTTCAACTTTGAGAAAATATCAC
TCTTCGACTTTGAGAGAACATCACGGAGGTCTACATGGGCTCACGAGATA
GACTGGATACATGCAGGAAAGAATCTCGTCTGGGTCATTGGGACCTACTC
TTCTTTTTTACTTGGAGACACCATTGTCAGGAAAGGCATTAGCTCAGAAA
CACCTGATGGGAAAACATGGCAAGTGGCAGAAGCAGCAAATATGAGAGAA
ATCAGCACCAGCTCCAGAACTGGACAGCTGTGGGCGGTTGAATGGAGCGG
AAAAGTGTGGCGTTCGCCTTTCTACTGTGAAATTTCAGCGAAGTACGACT
GGGAATCATTTAATGGCTGCTACAGGTCAATATCGGTGGGACGTGCAGGA
GTTTGGGCGGTGGACAATTTCGGCGGTGTGTATCACAGAGCAGGGACGTT
TTTGAACGAAACATCCCCTGGTGGAACTGGATGGGAAGTAATCGGTCCGG
AAAGGTTTGTGCAGATCTCAGTTGGACGTGTTGGAATGTGGGCAGTCTCT
AATACCTCTACTGTAATGTACCGCGTAGGAACGTACGGGGACGAGGAAAC
AGCGGGCCTCCGATGGCAAGAAGTACCTATCGACTCGGTCAACAATGATC
TCTTCAACTTTGAGAAAATATCACTCTTCGACTTTGAGAGAACATCACGG
AGGTCTACATGGGCTCACGAGATAGACTGGATACATGCAGGAAAGAATCT
CGTCTGGGTCATTGGGACCTACTCTTCTTTTTTACTTGGAGACACCATTG
TCAGGAAAGGCATTAGCTCAGAAACACCTGATGGGAAAACATGGCAAGTG
GCAGAAGCAGCAAATATGAGAGAAATCAGCACCAGCTCCAGAACTGGACA
GCTGTGGGCGGTTGAATGGAGCGGAAAAGTGTGGCGTTCGCCTTTCTACT
GTGAAATTTCAGCGAAGTACGACTGGGAATCATTTAATGGCTGCTACAGG
TCAATATCGGTGGGACGTGCAGGAGTTTGGGCGGTGGACAATTTCGGCGG
TGTGTATCACAGAGCAGGGACGTTTTTGAACGAAACATCCCCTGGT
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000047 | genome | Sc0000047:1647233..1648742 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL96557_cuf0 |
| Biotype | protein_coding |
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