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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL96551_cuf9 >transcript:BL96551_cuf9-protein ID=transcript:BL96551_cuf9-protein|Name=transcript:BL96551_cuf9|organism=Branchiostoma lanceolatum|type=polypeptide|length=172bp
QTVAVKTLKASAEERDKEDLKGELDILVTVGRHDNIISLVGACTVEGPLT
LVVEYAPNGCLKDWLKNSRPKELNQTDDKTIATGIQLPMDQLIMFGIDIA
NGMNHLAAMQCVHRDLAARNVLLGQDLTAKISDFGLSRDIYEESEYVKST
KSQLPVRWIAYESLFYHVYTTQ Run BLAST on NCBI mRNA from alignment at Sc0000009:291748..293123- Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL96551_cuf9 ID=transcript:BL96551_cuf9|Name=transcript:BL96551_cuf9|organism=Branchiostoma lanceolatum|type=mRNA|length=1376bp|location=Sequence derived from alignment at Sc0000009:291748..293123- (Branchiostoma lanceolatum)
CAGACTGTGGCTGTCAAGACGCTGAAAGGTGCCTTTTTATACATTATACA
TACTACATACAGCTATAGGAAGCAAAGAGGCCTTGATAATCCACCCGATG
ATAAGTGGTTTCCAATTCAGATGATTTTCTGCTTTATAAAATACACAAAC
ACAAATGACCTGCTGACATTCAAGGAAGTCCAATAAAAGTATGCTAGTAT
GCTTATGTCAGTTTCAAGATATCAGTAAGCTGATGACTCTGGGAAATCGT
TCTTTTTTCAATTTTATCATTTTCCAGCATCTGCAGAGGAAAGGGACAAA
GAGGACCTTAAGGGAGAGCTGGACATTCTGGTCACTGTCGGTCGTCATGA
CAACATCATCAGTCTGGTTGGTGCATGCACGGTAGAAGGTAATGCCACTA
AGCGTTAGTTTTGTCTGAATACTGTTACCATGCATGTCTCTTTCAGATAA
GAATTCTACTTATGAACGTAACATCTAAAATGATTGTCCAATAAGCAATC
TATTAGCCTATTTATGTGATCAAACAATCAACTTTAGGCCCACTGACACT
TGTGGTCGAGTACGCCCCCAATGGATGCCTGAAGGACTGGCTAAAGAACA
GCCGTCCAAAGGAGCTGAACCAGACAGATGACAAAACCATCGCCACCGGG
ATTCAGCTGCCTATGGACCAACTCATAATGTTCGGTATAGACATCGCAAA
CGGGATGAATCATTTGGCTGCCATGCAGGTAAACAAATGTATGCTTCAGT
GTCGAAGGGGTGTACATTGCTGGTTTTGATTGCAAATCCCTATCAAAGCC
TTAGATTGTCATAGAGTAGCAATAAGATTTGACCATTGTCTTATCTTGCA
CTTCATCGAAGAGTCGACTGCATTGAGAGTCCCTATGATTGCAATATACT
ATACTATACAACTGCATTGTTGTAAAACCATCATCTAAGCTAACCTCTTA
GGCTTGCTAAATGATGTTCTTCATGAAATTCCGTATGTTTTCCTGCTTTT
TTGAACGTGTTATGTCACTGCACTATGCAATAACAACATCATCATTTACC
CGTCCAGTGTGTCCACCGAGACCTTGCCGCCAGGAATGTTCTCCTCGGAC
AGGACCTGACGGCCAAGATCTCAGACTTTGGTTTGTCACGTGATATCTAC
GAGGAGTCTGAGTATGTCAAGAGCACAAAGGTGTATTTCCTTTTTTTTCA
CATTTCTTTGAAACTTTATATGATCCCGGTTAAGTTAAATGGTGAAGGTA
GAGCGACATATATATTAGTCGTTTTCCTGACCGTACCATAACACTATTTG
TGCCCTTTACAGAGCCAGCTTCCCGTCCGTTGGATCGCATACGAGTCCCT
TTTCTACCACGTGTACACCACACAGA Coding sequence (CDS) from alignment at Sc0000009:291748..293123- >transcript:BL96551_cuf9 ID=transcript:BL96551_cuf9|Name=transcript:BL96551_cuf9|organism=Branchiostoma lanceolatum|type=CDS|length=2580bp|location=Sequence derived from alignment at Sc0000009:291748..293123- (Branchiostoma lanceolatum)
CAGACTGTGGCTGTCAAGACGCTGAAAGCATCTGCAGAGGAAAGGGACAA
AGAGGACCTTAAGGGAGAGCTGGACATTCTGGTCACTGTCGGTCGTCATG
ACAACATCATCAGTCTGGTTGGTGCATGCACGGTAGAAGGCCCACTGACA
CTTGTGGTCGAGTACGCCCCCAATGGATGCCTGAAGGACTGGCTAAAGAA
CAGCCGTCCAAAGGAGCTGAACCAGACAGATGACAAAACCATCGCCACCG
GGATTCAGCTGCCTATGGACCAACTCATAATGTTCGGTATAGACATCGCA
AACGGGATGAATCATTTGGCTGCCATGCAGTGTGTCCACCGAGACCTTGC
CGCCAGGAATGTTCTCCTCGGACAGGACCTGACGGCCAAGATCTCAGACT
TTGGTTTGTCACGTGATATCTACGAGGAGTCTGAGTATGTCAAGAGCACA
AAGAGCCAGCTTCCCGTCCGTTGGATCGCATACGAGTCCCTTTTCTACCA
CGTGTACACCACACAGCAGACTGTGGCTGTCAAGACGCTGAAAGCATCTG
CAGAGGAAAGGGACAAAGAGGACCTTAAGGGAGAGCTGGACATTCTGGTC
ACTGTCGGTCGTCATGACAACATCATCAGTCTGGTTGGTGCATGCACGGT
AGAAGGCCCACTGACACTTGTGGTCGAGTACGCCCCCAATGGATGCCTGA
AGGACTGGCTAAAGAACAGCCGTCCAAAGGAGCTGAACCAGACAGATGAC
AAAACCATCGCCACCGGGATTCAGCTGCCTATGGACCAACTCATAATGTT
CGGTATAGACATCGCAAACGGGATGAATCATTTGGCTGCCATGCAGTGTG
TCCACCGAGACCTTGCCGCCAGGAATGTTCTCCTCGGACAGGACCTGACG
GCCAAGATCTCAGACTTTGGTTTGTCACGTGATATCTACGAGGAGTCTGA
GTATGTCAAGAGCACAAAGAGCCAGCTTCCCGTCCGTTGGATCGCATACG
AGTCCCTTTTCTACCACGTGTACACCACACAGCAGACTGTGGCTGTCAAG
ACGCTGAAAGCATCTGCAGAGGAAAGGGACAAAGAGGACCTTAAGGGAGA
GCTGGACATTCTGGTCACTGTCGGTCGTCATGACAACATCATCAGTCTGG
TTGGTGCATGCACGGTAGAAGGCCCACTGACACTTGTGGTCGAGTACGCC
CCCAATGGATGCCTGAAGGACTGGCTAAAGAACAGCCGTCCAAAGGAGCT
GAACCAGACAGATGACAAAACCATCGCCACCGGGATTCAGCTGCCTATGG
ACCAACTCATAATGTTCGGTATAGACATCGCAAACGGGATGAATCATTTG
GCTGCCATGCAGTGTGTCCACCGAGACCTTGCCGCCAGGAATGTTCTCCT
CGGACAGGACCTGACGGCCAAGATCTCAGACTTTGGTTTGTCACGTGATA
TCTACGAGGAGTCTGAGTATGTCAAGAGCACAAAGAGCCAGCTTCCCGTC
CGTTGGATCGCATACGAGTCCCTTTTCTACCACGTGTACACCACACAGCA
GACTGTGGCTGTCAAGACGCTGAAAGCATCTGCAGAGGAAAGGGACAAAG
AGGACCTTAAGGGAGAGCTGGACATTCTGGTCACTGTCGGTCGTCATGAC
AACATCATCAGTCTGGTTGGTGCATGCACGGTAGAAGGCCCACTGACACT
TGTGGTCGAGTACGCCCCCAATGGATGCCTGAAGGACTGGCTAAAGAACA
GCCGTCCAAAGGAGCTGAACCAGACAGATGACAAAACCATCGCCACCGGG
ATTCAGCTGCCTATGGACCAACTCATAATGTTCGGTATAGACATCGCAAA
CGGGATGAATCATTTGGCTGCCATGCAGTGTGTCCACCGAGACCTTGCCG
CCAGGAATGTTCTCCTCGGACAGGACCTGACGGCCAAGATCTCAGACTTT
GGTTTGTCACGTGATATCTACGAGGAGTCTGAGTATGTCAAGAGCACAAA
GAGCCAGCTTCCCGTCCGTTGGATCGCATACGAGTCCCTTTTCTACCACG
TGTACACCACACAGCAGACTGTGGCTGTCAAGACGCTGAAAGCATCTGCA
GAGGAAAGGGACAAAGAGGACCTTAAGGGAGAGCTGGACATTCTGGTCAC
TGTCGGTCGTCATGACAACATCATCAGTCTGGTTGGTGCATGCACGGTAG
AAGGCCCACTGACACTTGTGGTCGAGTACGCCCCCAATGGATGCCTGAAG
GACTGGCTAAAGAACAGCCGTCCAAAGGAGCTGAACCAGACAGATGACAA
AACCATCGCCACCGGGATTCAGCTGCCTATGGACCAACTCATAATGTTCG
GTATAGACATCGCAAACGGGATGAATCATTTGGCTGCCATGCAGTGTGTC
CACCGAGACCTTGCCGCCAGGAATGTTCTCCTCGGACAGGACCTGACGGC
CAAGATCTCAGACTTTGGTTTGTCACGTGATATCTACGAGGAGTCTGAGT
ATGTCAAGAGCACAAAGAGCCAGCTTCCCGTCCGTTGGATCGCATACGAG
TCCCTTTTCTACCACGTGTACACCACACAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000009 | genome | Sc0000009:291748..293123 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL96551_cuf9 |
| Biotype | protein_coding |
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