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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL96545_cuf7 >transcript:BL96545_cuf7-protein ID=transcript:BL96545_cuf7-protein|Name=transcript:BL96545_cuf7|organism=Branchiostoma lanceolatum|type=polypeptide|length=119bp
EKSRPIHQFHFHGWPQYGVPDNAAGIIDLIGQVQKQQQLSGNGPITVHCS
SGAGRTGTFCAISTVLERVKTEGNCDVFQTVKALRQQRPHMVQTIDQYQF
CYQAVVEYLDSFDHYSNFA Run BLAST on NCBI mRNA from alignment at Sc0000009:1608716..1611421+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL96545_cuf7 ID=transcript:BL96545_cuf7|Name=transcript:BL96545_cuf7|organism=Branchiostoma lanceolatum|type=mRNA|length=2706bp|location=Sequence derived from alignment at Sc0000009:1608716..1611421+ (Branchiostoma lanceolatum)
AGAAAAGAGTCGCCCTATCCACCAGTTCCACTTCCACGGATGGCCGCAGT
ACGGCGTGCCCGACAACGCGGCCGGGATCATCGATCTGATTGGTCAGGTT
CAAAAGCAGCAACAGCTGTCTGGCAATGGACCAATCACCGTGCACTGCAG
GTAAATACCAAGTCTTCATTGTGCATCAGTCTTCTAATCATAATCATACA
TGCACAAAACTACTTACAACGTCGCCAAAAATAGTAACTCATTGACAAGC
AACTGGATAAGATGTTGAAACATTCAGACGTTTCAGACAGCATCCGCTAT
CTTTCGTCAGTCAAGAATTTCAAGATCTGGTAGAACTAGAAACAAAATCT
TATCCAGTCGCTTGTAATGAGTAACTATTTTTGGCGTATCTTATTACCTG
GATGTCTAACTTTCATCAACGTACTTACAACGTCTTTGTAGCTAAATAAC
AGCCGATTGCTACTTTTCTTTCTTGTCTGCAGTTCCGGTGCAGGCCGCAC
TGGGACGTTCTGTGCCATCAGCACAGTTCTGGAGCGGGTGAAGACAGAAG
GAAACTGTGACGTCTTCCAGACAGTCAAGGCTCTCCGCCAGCAGCGGCCC
CACATGGTGCAGACTATCGTAAGTGATAACTTTGACTTTATTTGGATCCA
CAATTAGCTTGACATTTCTGTTATCTGTTCTACCTGTGATCCTTTACATG
CAATACATCAATACAAAAACACTGATATAATAGACAGGGTAACCACAGAC
AGCCATACTTGAAACACATGGTATACACTAAAAAAATACAGATTCTAAAG
TAAACGAAATACAAGTTTATTCAACAGCTGCCCTGTGTTGTGAAGCGTTC
CAGTGGTGAGACATACGTTGGAGAAACCTTACCTTCTCAGCATTTGTCTT
AGGTTTTGGCAAATTGGTGTACCACATTGATATGCTGCATTAGCATACGA
TAATTTTCTAAAAGATGTACAGTATTGGCATTTACAATGACCTATGATAT
GATGATCTATGGGAATCCCTAGGGCGCTTTTACACGGTAAGATTTGATCT
TGTTTTTAAAGACAACCCAAACAATATTAGGGCCTAAAATTCGGATTTTG
AAAGTCAGTTTATTTAATAATTTCTATACATGATTAGTTCAAACAACACT
ATCACAATGTATAGCGACGTCCATGATGCAAAAATATGACTTCGTTGTAA
TGTGAGAACCCACTGAAAATTGTCGCCGGGGTTTTTGTATTTTCGCGAAA
CTAAGGGGATCATCGTATGGCATGTTTTTGCACGGTTTCAATATGCTCAA
GGTATGAAGTTATTACATAATTGTGCTAGACAATGTTAGTAAATGTCAAT
ACAATAAAGATATCAGTTGTTATTGCTATTTTTGGTCCCTAATATTGCTT
TTGTTGCCTTTAACACTTTTTAAATGAATTTCAATTTCATGTTTCTCCAG
GACCAGTACCAGTTCTGCTACCAGGCCGTGGTGGAATATCTGGACAGTTT
TGACCACTACTCAAACTTTGCCTAGATATTCTAGTTGTGGAGAAAGTACA
TCGTACAATCTTGTTTAGAATGTACATAGCACAAGTTATAATCTGTTATA
TGTTAGAATGAAATACCGTCCGTGTTGATACGATAATTCTTTTTCATACT
ATTTCTATTACTTTAAACAGCATAAAAATACTGGAATCCAAAATATTGCC
AATTATTTTGCAGAGAATATGAATATCTCGTTGCATGCTTCATGATATAT
AATATAGCTGAACAGTTAGCGTAGAAACCCGGTCAAATATAGCCTGTGTT
TACACCAGCTCTCGGCCGGAGGTTACTGACCCCCACGATGGCGGTCACAG
GACCGGCTGGCCACTAGGAGCGCGATTCGTCAGGCTAGGGCAAATAGATC
GAGGAAAATATTTCCATAGTTTATTTTCTGTCAACGCTTGCTTTTGGCTG
AGTGTGTGTTCATGATACCACGTGTATTAAGACTGATTTATTCCAATTAT
AACTATTTTATATCAATGACATTGTTGCTATATATAGTGTGATACGTATT
GAGATACACAGAGTGAACATAATTGAAATGATTTATAGTATTGGTGTGAC
AAAAGGTCTATAATGTAATGTTTTCGTTAGTTTGCAACTCGGCGTGTTAA
CAAGACATAATTGTTGTCATAAGCAATGAAACCAGAAGATTTATTGAAGG
CTAGCTAGTGATAAAATCACCAAGTTCCTTCTTTGTCTTGGCTTTAGAGT
GATAATGATATATTTCAATATTATTTTCTAAGAAACAAAGTACTCTTGTT
ACAGTTGTTTAGTCTAGCTACAGTGTTGGTGTGACAAAAGCTCTATAATG
TAATATTTTCGCTAGTTTGTAACTCGGCGTGTTAACAAGACATGATTGTT
GTCAAAAGCAAGTGAAATCTGACGATTCACGGAAGGCTAGCTCGTGATAA
AATCACCTTCCTTCTTTGTCTTGGCTTTCTGAGAGTGATAATGATAGATT
TCAATATTGTAAGAAACAAAGTACTCTTGTTACGGTTGTTTAGTTTAAGT
ACCCAATTTTGTGCTTTGTTTAGAAATGTTCTGATATTGACAGTGTCATA
GAGCTGAATGCTTCGGACTGTTTTTTGCCGCTATTGTGATAAAAGAATTG
TAAAAACTTGAATCAGTGTTGCTGAGTTTGAGTCAGGTTAGACTCGGAGA
AGGGAG Coding sequence (CDS) from alignment at Sc0000009:1608716..1611421+ >transcript:BL96545_cuf7 ID=transcript:BL96545_cuf7|Name=transcript:BL96545_cuf7|organism=Branchiostoma lanceolatum|type=CDS|length=1080bp|location=Sequence derived from alignment at Sc0000009:1608716..1611421+ (Branchiostoma lanceolatum)
GAAAAGAGTCGCCCTATCCACCAGTTCCACTTCCACGGATGGCCGCAGTA
CGGCGTGCCCGACAACGCGGCCGGGATCATCGATCTGATTGGTCAGGTTC
AAAAGCAGCAACAGCTGTCTGGCAATGGACCAATCACCGTGCACTGCAGT
TCCGGTGCAGGCCGCACTGGGACGTTCTGTGCCATCAGCACAGTTCTGGA
GCGGGTGAAGACAGAAGGAAACTGTGACGTCTTCCAGACAGTCAAGGCTC
TCCGCCAGCAGCGGCCCCACATGGTGCAGACTATCGACCAGTACCAGTTC
TGCTACCAGGCCGTGGTGGAATATCTGGACAGTTTTGACCACTACTCAAA
CTTTGCCTAGGAAAAGAGTCGCCCTATCCACCAGTTCCACTTCCACGGAT
GGCCGCAGTACGGCGTGCCCGACAACGCGGCCGGGATCATCGATCTGATT
GGTCAGGTTCAAAAGCAGCAACAGCTGTCTGGCAATGGACCAATCACCGT
GCACTGCAGTTCCGGTGCAGGCCGCACTGGGACGTTCTGTGCCATCAGCA
CAGTTCTGGAGCGGGTGAAGACAGAAGGAAACTGTGACGTCTTCCAGACA
GTCAAGGCTCTCCGCCAGCAGCGGCCCCACATGGTGCAGACTATCGACCA
GTACCAGTTCTGCTACCAGGCCGTGGTGGAATATCTGGACAGTTTTGACC
ACTACTCAAACTTTGCCTAGGAAAAGAGTCGCCCTATCCACCAGTTCCAC
TTCCACGGATGGCCGCAGTACGGCGTGCCCGACAACGCGGCCGGGATCAT
CGATCTGATTGGTCAGGTTCAAAAGCAGCAACAGCTGTCTGGCAATGGAC
CAATCACCGTGCACTGCAGTTCCGGTGCAGGCCGCACTGGGACGTTCTGT
GCCATCAGCACAGTTCTGGAGCGGGTGAAGACAGAAGGAAACTGTGACGT
CTTCCAGACAGTCAAGGCTCTCCGCCAGCAGCGGCCCCACATGGTGCAGA
CTATCGACCAGTACCAGTTCTGCTACCAGGCCGTGGTGGAATATCTGGAC
AGTTTTGACCACTACTCAAACTTTGCCTAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000009 | genome | Sc0000009:1608716..1611421 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL96545_cuf7 |
| Biotype | protein_coding |
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