transcript:BL96517_cuf2 (mRNA) - B. lanceolatum

Overview
Nametranscript:BL96517_cuf2
Unique Nametranscript:BL96517_cuf2
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

protein sequence of transcript:BL96517_cuf2

>transcript:BL96517_cuf2-protein ID=transcript:BL96517_cuf2-protein|Name=transcript:BL96517_cuf2|organism=Branchiostoma lanceolatum|type=polypeptide|length=485bp
MGNTVTLIHYIVQKSTQSSTFFCCNLAIADGLSGIYLIIISSANVYFRDR
YFLEDQKWRSHIACSIAGGLIVFSKMASLTILVALVSDMYVVSRLITTRW
KCICNVIMMTLCWLFALLCTILPMRFPLDEVKDEATSAACSPFVDIVRKQ
GKWRHWFVLLVALPTIMVVASIALWGLCCFAEGFYRTKNTKKCVKHPESQ
WTMKLIIATNSISWLFVASVGMFCTTEDETVVVLVPWVVLFVVPLTSGLN
PLIQLATITPSWFTRREVYAKKDEEGNSYTSGDQLRWRLHGASSCLAGHE
LGVVAKRDNAEQMQLYLQCLENDVEPIHVTKVLLQFNKEGNALDEADITT
EMKVLRRIGIAGSHQNVISQCAIADKDDYKWVLHTNRHHYTLREVVTELT
SEDLLTINLDVIKALNFLHRNDIVLGRMSLETLLVVKEPQLTVIVADFSN
ARIVEKENNHRKVFDFDFREWKKLKRVVERRSTSL
Run BLAST on NCBI

mRNA from alignment at Sc0000006:3483777..3493177+

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>transcript:BL96517_cuf2 ID=transcript:BL96517_cuf2|Name=transcript:BL96517_cuf2|organism=Branchiostoma lanceolatum|type=mRNA|length=9401bp|location=Sequence derived from alignment at Sc0000006:3483777..3493177+ (Branchiostoma lanceolatum)
TCACAATGTCTATTTGTTACAAACATCGATTATATTATTCATACTCCAAA TTTATAGCCCTTGTAACCATGCAACTAACACTAGCTAATACATTACATCA TAAATTCATATTCCATCAAACGGGCAAGAACAAATCCATAAAGATGGCTA ACTGATTATAGTATCCCTTCCTTTTTGCTGCGCTTCCTATGTAACATCTG TCACGTACACATTCTACCGAGCTACATCCCATAAGCTTCATACTTCTTGA CATGCTGCCAATGACAGTTTTATGACTTTCCTTTAACCTAGAGGAGCTGT GTGAGGAAGACTTCAAATACTACAGGAGTAACTGCTTCCGCGTGATAACG GACAACGAGACGCTGTCCTGGGAAACAGCTCAACAGAGGTATCATTTCAT CCCGTGGTCTAAGACTCTAATACATAGCTGTTCACTACCGAGATCGTTTG CGGACTTTGATGCCTTTGTATTGTTTTCTAAGCTGTCAATCTGTCTGTAA TTTCAATCCGAAAAGTAAGCACATTGCCAGGCACGCTTACGCGAGGAATT CGTAGGCGCCACACTTTAATTCAAGAGAGATATTTGTACTTCTAGATGCA CGGAATTTGGTTCGGACCTTGCCAGCATTTCCAGCCCACATGAGATGGAG TACGTGGAACAACTACTCAGGGCGGTGAAGGACGTAAATTCTGATGGTTC CATCACGGCGTTTATAGGTCTCATGACTACAGGCCAGGATGCGAGATACG CCTGGGTGGATGGCAGCGAAGTGCGGTAAGGGCCATTAACCAACATGTTA ACGCAAAACGTTATAGCCAGACATCGCCAACTTAATCATGGTGATGGCCA TTCCACACTAATGGTTGTGAGATACAAAACTGGTTGCACTATCCCAGTAA ACATCAGTGCGAGTTCCTATCGTATTATATATTCAAACCGCTTATTATTT CACTACCATTATCTGAAATTAAGCTAGTGTCTTTCATTGAAAGGCACCAG AGCAGTCAAAGCTTTTACATATAGCATCGTATTCAGCTTCATGCATTGAC CGAATGCATGAAGTCACGTCCTACTGTTCGCCCATTGGCGAACGATTATT GAGCTCTTGAGTTTTAAAATATGTTTCATTGTTTCTTTTTTTTTGCATGA TTCTTCTTCATGATAATGTTAGGGTCACATTTCCAAACCGGCACCCGGCC AGGAAGTTTGCGGGAACGAAAATAATGATATAACAGACAAGAAAGCACAG AAATGTTTTAGAAATACAAATAGTCACGGGCACAATTTGTAATTCTTGAC ATGCAATTTTATTCAACAGCCCGGCCGGGCCCCGGTTTGGGAAATGTTGC CCTATCATAACGTTTGATCATTCTCATCTTTTGATCTAAGATTCACATAT TGGAGAGGGAGGGCGCCGCTGCCGGCCGGACAGAACACGGAGAGTTGTGC TCTGATGCTGGCGGGCAAAACAGCAGATTCACCCGAGACGAACTGGTACA CCGTGCCCTGTAACTACCCCGAGGCGACCAGGTCATACATTTGCAAGGCC AAGGCCCGAGGTAGTTTTGTCGATATCTTCTAGGTGATAAAAATATCTGA TATATAACCCTGTAGTGCTGTAAATCATCGATATTTTCAAAAAATATGGA AACAAAAAAACTCATCAGGTTTGTGAATGTCCCAAATGTAAATATTTGAT ACATAGAATTATATACTGTACGTTTGAAACCACATCGTCAGCAGCTACTC TGGATACTTTATTGGAATATTTGGACATCTAGCTACAGAGCAAAGTGAAA CATTCATTATTGCCATGACGAAGATGACAGACGGTCACCGAAACGTCGGC TACTATGTGACTCCTTGTTACTCTTTGTTATTTAAAATACCCATCACAAT CATACAATATGTGGTTACAGTATTGTATTCGTTGAGTACTGACTTTGTGG TCGTGGAGTGAAGCTTATACACATAAGGTAAAAACGGTGAATGTATCACG TGAACGCATCTTAAGATAATGAAAGTCCTTTACTGTACATTCATGCTTCG AGTGGCTAGGTAAAACAACAATACACGAGTTAAACATACATAGTAGGCAA GAGTGTTGTACTAAGCTATCCGGTAGAGTCAACTTAAGCTTCTTCTCGCT TCTTTGTAGATGCGGGAACAGATATTGTGTCTTATACAGACAGGGTTTGT CTAAAGGCATAAAAAATAAACATTGCATTTAGGTCTTCAAATTGATACAG CTTCTGAAAACCATTTACATTCTAATATTTTTTCTGTACCAAGGCTGCAA CAGGGGTTGGATCATGATTGGAAAGTCTTGTTTCCGGACCTACACGCTTC CTGCCCGAAGTACCAACCCAGCCCGGGACAGCATCCGTCTGTGCCTCAGA GAAGACTCGACTGTTGCAGCCCTCAACTCGTCTGCTGATGTTCTTCGTGT ACAGGACTATCTTGAACATATGTGGCCGGTGCATCCGCACGCGCGTGTAT ACATGGATATCAAATATGATGAAACAAGCACCTGTGGTGTGTTAGAGCGG CGATATGACATGAATGGTGACAGGTGGACAGTTCCAAAAACTGAATGTCA GTTTAGGAGACCCAACCTGGTTCTCTGCTCCATGGATGTAGATGGTGAGT AGAATTGAAGCACTGCTATGTTTTTCGCAACAAAAGTTACACACACATGC AGGATCTAGAATAACGTTAAATTCGTTTGCTTACTATTTCTGTTAGATTG ATAATTAAGGCATTAGATAAGATATATGTGATTGATCTAGGCTGTCATTA AATTCGTTTTGCTCACTAATGCTATTGCTGTTAAAATGATGATTAAGTTA TTGAATAAGATATATTTGAATAAAATTACTTTAAAAAAGCAGTGAACCAA AACTTTAGAATTGACTAAGAGAATCTGAAACAATATGTAAATTATATACT TGATCTAAGTCACACCGAGTAACACTAAGTATCAGAATACATTGTGCGTC ACTCTACTAAAATGCTTTCATTGCGACATAAACTAACGGTACGAATTCTA GACCTTGGCCTTCCAATGGATAAGACTCTATCTAACTGTGATTTACTACA TTTCCAGCCTCAACTTGCCCATCTTCATGTAAGTGCGTGAATGGAGTCGT CTCCTGTTTGAGCAAAGGCCTGACGTCTATTCCGCCAAAGGTACCAAGAA CAAGTCGTGAACTGTAAGTATACAGGAAAATGGCAGGAAATGAGTTCAGT TCCTGTATATGAAAAATATGTCATCTTATTGTATTGGACTAATTGAAAGA TAAATAGATAGTCAGAATCAAAAATCAACTGATCAATCTTTCTATCAAGC ATTGTCGGGATGAAATAGATAAAGACTTTACATGATGTGCATCAGAAGAA GGTAGTTCTTGCCAAACCTGGAAGACAACTATGTGGCTCCAAGTTGCTAA CTCAAACCATAATATATGTATGTGACAAAACTTAACGTTTGGGACCGTTG TTAACAGTGACACCTAGCTGCAGTACAAAGAGAACGTGGCAGAATTGCCC TGAAGAAGATGACAGTCGTTCATTGAAACGTCGGCTCTTGTTAAATATGC GGTTGTCAATAAAAAAAAAACTTTGCTATTCAGTCAAACTATAATGATTC TATTTTCAGATATTTCACAGGAAACAGACTCAACTTAACCAAAGCTTCGC TGAGAACGTGGGGGCTGCTGACTACACTGTAAGCATTTAGTGTTGCCCTA AAAAGATCAATAACATTCAACCGACGGGAAATCTTCTATTGCACGAACCA TCTGCTAGCCAATAACGGCTCATTGACTTCTGGCGGTAGATACCCTTGTA GTTCACGGCTAATCGATGCTTGCTGTAGTTGTTACATGTGACCTAGCATA CTTTGACAGTGCAACTTTGGTACCCCGCTGGCGCCATCTATTTTTACAGT AAAATTTTCTTTTGATTGCATATTGATAGTTTTACACGCTTTATCCGTAT ATGAAGCGAAGCACATAGCAACAACCGTATTTGACCAGCCCTCTGGTCCT TGTCATGTTGATTTGACCCGAAGCTACGTCACTTGACCTGGGCGGAAGTG TGACGTCGGCAACGGGTCAAGGGTGCCCGGTAGTAGGTATCAGCCCCCGT CTCTGTTGAGGGAATGTCTTTTACCCTACCATGAAAATAACAAGGAAGCA AAATCGATCTAAGCATTGACGGTACCTGTAAACTACAATGTTCTACTGTG CTGTTGAATTTGAAAAACAGATTAACACCGAGGACCTATCAATTTTAGTG ACAAATTTACGTTTTCTTGTTCCAGGGACATCAGTGATAATTCCCTTACA GGTATACCGGCTGGTGCCTTTTCTAGCCTCTTCAAGTTACGAAATCTGTG AGTANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNAGAGAGAGAGAGAGAGAGACAATCTTGGCTGTTTTGCACGAC GTAAATCTACTAGATAATGTTTCAACTTATCCTTCCATACCAAGTACACG TATACGTAAGACATCAGCGGTTTAAGCTATCAAACTGTTGTTATATTGTT GTCTTCCTCAGAAACATCAGTTTGAACCTAATTTCAAAGCTGACGGCTGG AACTTTTGATGGGTTGGACAACCTGCAAGTGCTGTAAGTGATTTGTGGAT ACCCATTTCACAGTGTTTTTCTTCCGAGTGGCATGCTTCATATATTGCGC AAGATGGTAGACGAGTAGTATTTTACAATTGCCTACAGATCATTGTACAG ACATACGGCAAATTGACAGGGTCTGTTCTTTCTTACCCCAGTGACTTGAC AGGCAACAATGTCCATGACGTAGATGTGAATGTCTTCTTGAGTCTACTCA ATCTGCGAGACTTGTAAGTATTCGGTAGAATATAACGTTACATCTACTTG ATTAGAAGGCTAAGGAGCATGCCTTATTGGTCCTAAAGCGGGTATCTAGC TGAACCCGCGGCACTTTGGCGACCTCGCTTAGACTGAGCGATTTGACAGA GAGCTCAACGAATTTCATCGATAAGAAACTTATCTTTGTACGCTTTGTGT GTATTGTTGTCTTTCTATTAAAAAAAACTTGTGCGTTTTGCAGGATATTC TTATTAAAAAGGGCAACACGAACCCAAGTTGCCGCAGCTTCAGTGAGATA TATCCGATAACGGTGTTTAATGCACAGTAAGATAAGTGTGATGAATGTGT TCCGAATGAGAGATGGGAAAAACCGTAATCTGTAGTCAGGCATTTAGAAA AATCAATACCATTGCGGTAGATTTGTATCGGAAGTGGGCACGTGTCGTTA ACGGATCCGGTGACAGTAATTTTGTGGTTCGCGTAGTTTCACGGCCGTTC CCGTAATTAATTAGAACCCGCCAAAGTGCTGGGCGGAGAGCACACGGACG GGGCGCGTTTGACTGGTTCTTCTCTCTCCCTGCAGGAAAACTAATCAGCA CAAATTGTGCTGTTTGGCGCCTCACACGAACGCGTGCTTTGCTGGGCACG ACCACATATCCTCATGTGAGCATCTGATCAGGAGACAGAGCCTGGAAATT ACAGTCTGGGTCTTGGCAATAGTGTCAATTATGGGCAACACCGTCACCTT GATTCACTATATTGTACAAAAATCAACTCAGTCATCGACGTTTTTCTGCT GTAACCTCGCAATAGCCGACGGTCTTTCGGGGATATACTTAATAATCATT TCATCGGCGAATGTTTATTTCAGAGATAGGTATTTTCTTGAAGATCAAAA ATGGCGCTCTCATATAGCATGTAGCATAGCAGGAGGGCTGATTGTGTTTA GCAAAATGGCTTCCCTTACGATACTCGTAGCACTCGTTTCAGACATGTAC GTGGTATCCCGACTGATTACAACTCGGTGGAAATGTATCTGTAATGTGAT TATGATGACGTTATGTTGGCTGTTTGCGCTCCTATGTACTATCCTCCCCA TGCGTTTTCCACTCGATGAGGTAAAAGACGAAGCAACGTCTGCTGCCTGT TCGCCATTTGTTGACATCGTTCGAAAACAGGGGAAGTGGAGACACTGGTT TGTGCTGCTAGTTGCTCTACCAACCATCATGGTAGTGGCATCAATAGCCT TATGGGGATTATGCTGCTTTGCAGAGGGATTTTATAGAACAAAAAATACC AAAAAATGCGTAAAGCACCCGGAGAGTCAGTGGACAATGAAGCTGATAAT TGCTACAAATTCCATAAGCTGGCTGTTTGTTGCTTCCGTTGGAATGTTTT GTACCACGGAAGATGAAACTGTTGTCGTGTTAGTGCCGTGGGTGGTGCTT TTCGTTGTTCCCCTCACCTCGGGACTGAATCCGCTGATTCAACTGGCGAC GATCACACCGAGTTGGTTCACGAGGAGAGAGGTGTATGCCAAGAAAGATG AGGAAGGAAACTCGTACACGTCTGGGGACCAGCTCAGGTGGCGTCTGCAT GGAGCTTCCTCTTGTCTAGCTGGTCATGAGCTCGGCGGTATGTATTAAAT ATGAAGAACAATAATGGTGTCTATCTCGTAAAAACATTGTGCACCGTTTT AAGAATCGTTGATCATCAAAAACTTACATCCAATTACAGATATTATACAC AAGTATAACTTACTTATAATGTCCATGAAATATTCTTAAGTACTAGGTTT CTTTTAGATCAACACTGAAATATGTTAATGATTTATTGTAGTAAAAAGTT CATAATACACTCGGACAATTCTGTGTATCATACAATAATTGGTATTTCGT ACGGATTATGATTCTGAAAAATGACGACTGGCTGACTAGTTATTGTAGTA TGTTAAATGGTACTCAACGATAAATTAAAAACAGAAGAGAATTACTTTTT TACCATTCATCAATTTAAAACATTGACATCTCTATTCTCTGTGTATCTTT TAATGTAGGGTTGGTTCCATTGTCTCTTTCAGTCGTTGCAAAGAGAGACA ACGCTGAACAGATGCAGTTGTATTTGCAGTGCCTTGAAAACGATGTTGAA CCTATCCATGTAACAAAAGTATTGCTGCAATTCAACAAAGAGGTAAGAGA TGGGTAAAAAGATCAATAAATACAACTCTTCGCTTAGCACTGAGATGAAG TTCATTCCAACAAGTATAACCAGATAAGTGAAATTTTAAAGCACATTCAA CATGTTTGTAACATTTTCCTTATTGTTATGGGCTGTTTTTACCTAGTGCT GGAAATGCAGAAAATGGAGTGTTCGCGGTCGTATAAGTTCTCGTTTGAAA CAATAGTAGCACTAGCCTCCAATCAGGCCCAATGGATTGCAAAGACCGTA TCCAACTGGAAGAAGGAGCTTGTATAGCAAAAAAAACATACTTCTTCTGC CAGTTGGATACGGTCTTCGCAACCTATAGATCTGCTTATAGTAGCACTAC AGTTCGCGATGGGTTTAAGTTCACCGCGATAACCGCGAACATAAAGCCAC CGCGAACATTTCTGCATTTACAGTATGCCTTCCTCTCCATCTGTAGGGTA ATGCGTTGGATGAGGCAGACATTACGACTGAAATGAAGGTATTAAGGAGA ATTGGTATCGCGGGCAGTCACCAGAATGTCATCAGCCAGTGTGCAATTGC AGACAAAGATGATTACAAGTGGTAAGCATTTCCATCTTTATTATCTATCA ATTTGAGTTTACACAAAATAACAACATCTGTTTCGAGGAGATTCTGAATG TAATGACGTACTCATCAATATGCCGCCCTTGCAATCACAGCTGAAAGGCT GCACTTAGTTTTACTAATACATACTTAGCGTTACTGGTATTACAACATGT ACATAGGAATGTCTATATATACGTAATATAAATGGATTATAAACTGTAGC TGAAAAGCAAGGTTAACAATGCAATGTAGGTCCGTCGGGGTCGCCCGACA CTGGAGTGTCCATGAGTTGGTGTCCAGAGTAGGAGTTCACTTACAAGCTC ATCTTTGTTTCTATAGCTATGCTCTGCAAACCTAACCCTTCTCTCTCGTA TGGTTGTTGATACAGTTGGTAACATGCCATACAGTTCTACTTTAGTTGGG TGGTGTTTCCAGGATTTGTTGAGCACAGCTCGTAGCATGCGGGTATACGT TCCGTCATTTCATAATTAGAATATGATATAAGATGTGAATCAGTATTTTA AAGACAATAAAATGCACGTAACGTAAAAAAATCTTCTTTTTCTACGCTAT CCGTTGAGCATTCTTCTAATTCTTTGGTCGCTGAGCTGTTGCGCCGTGGT CGCAGGCTCTTGAGGAAAGGGGTTGTTACTGGACCCGCGATGCGTTGGTG ACCTCGCTGCGTCCTAGATTGAATTTGAGTTAGCCTTGACTTTACAATGG GGATACCATGCAAAACGAACAAGCATGACTAAAAAGACAACAGACCGTTT AGCGCGGTGTCAAATCGCTCGGTCGCAGCGAGGTCGCCAACGTGCCGCGG GTCCAGTGAAAGGGAGTGTTAGGAACCTGTATAGAATCTGACCTCGCTGT ACTTCCCCAGGGTTCTACACACCAATCGTCATCACTACACTTTGAGGGAG GTGGTGACTGAATTGACATCTGAAGACCTCCTAACCATCAACTTGGACGT GATAAAGGCCTTGAACTTCTTGCACCGAAACGACATCGTCCTTGGCAGAA TGTCACTGGAGACTCTCTTAGTCGTAAAGGTCAGTTAAAAACTATCTAAA GTTCGAAAAGTAGTATCGGTCGCACTACATTCACGTGATAGACTAGAGGC AAAGTAACTTGAAAAGTCCATCCGTCTTCAATTTGGTGGAAGTCATTCTG TATCAAAGTTGCAATGTAATTTCCATCACAAAAACTTTATCAAGGAATGA GCAATCCACTCCTTCGGCGGGGTCACGTTATGCAGATATAACATCTGACC CTGTGAGTAGTTAATCATAAGTTGCAGAAAGTCTATGGCGACCCCCGTCT CTGTTGAGGGATGGTTGTAAAGCGCTGATTTAGATGGCGTCTTTTATTTC TCTTGCAAATAAGTTCTTTGTCCAGTATGACATAGTGTATAGGCATGTGA AGTACTTGAGATTCTGTTGATTTTTTATTGCGCTGCCCTGAAATGTGTAA CACATACCAACCAAACAATACGCCTTATCTCATATATTTTTCATACCTGT TCCAGGAGCCGCAGTTGACGGTCATCGTTGCTGATTTCTCCAATGCCAGG ATCGTCGAAAAAGAAAACAACCACAGAAAAGTCTTTGATTTCGACTTTCG GGAATGGAAGAAACTGAAACGTGTTGTCGAACGTCGCTCTACCAGTCTGG C

Coding sequence (CDS) from alignment at Sc0000006:3483777..3493177+

>transcript:BL96517_cuf2 ID=transcript:BL96517_cuf2|Name=transcript:BL96517_cuf2|organism=Branchiostoma lanceolatum|type=CDS|length=7275bp|location=Sequence derived from alignment at Sc0000006:3483777..3493177+ (Branchiostoma lanceolatum)
ATGGGCAACACCGTCACCTTGATTCACTATATTGTACAAAAATCAACTCA
GTCATCGACGTTTTTCTGCTGTAACCTCGCAATAGCCGACGGTCTTTCGG
GGATATACTTAATAATCATTTCATCGGCGAATGTTTATTTCAGAGATAGG
TATTTTCTTGAAGATCAAAAATGGCGCTCTCATATAGCATGTAGCATAGC
AGGAGGGCTGATTGTGTTTAGCAAAATGGCTTCCCTTACGATACTCGTAG
CACTCGTTTCAGACATGTACGTGGTATCCCGACTGATTACAACTCGGTGG
AAATGTATCTGTAATGTGATTATGATGACGTTATGTTGGCTGTTTGCGCT
CCTATGTACTATCCTCCCCATGCGTTTTCCACTCGATGAGGTAAAAGACG
AAGCAACGTCTGCTGCCTGTTCGCCATTTGTTGACATCGTTCGAAAACAG
GGGAAGTGGAGACACTGGTTTGTGCTGCTAGTTGCTCTACCAACCATCAT
GGTAGTGGCATCAATAGCCTTATGGGGATTATGCTGCTTTGCAGAGGGAT
TTTATAGAACAAAAAATACCAAAAAATGCGTAAAGCACCCGGAGAGTCAG
TGGACAATGAAGCTGATAATTGCTACAAATTCCATAAGCTGGCTGTTTGT
TGCTTCCGTTGGAATGTTTTGTACCACGGAAGATGAAACTGTTGTCGTGT
TAGTGCCGTGGGTGGTGCTTTTCGTTGTTCCCCTCACCTCGGGACTGAAT
CCGCTGATTCAACTGGCGACGATCACACCGAGTTGGTTCACGAGGAGAGA
GGTGTATGCCAAGAAAGATGAGGAAGGAAACTCGTACACGTCTGGGGACC
AGCTCAGGTGGCGTCTGCATGGAGCTTCCTCTTGTCTAGCTGGTCATGAG
CTCGGCGTCGTTGCAAAGAGAGACAACGCTGAACAGATGCAGTTGTATTT
GCAGTGCCTTGAAAACGATGTTGAACCTATCCATGTAACAAAAGTATTGC
TGCAATTCAACAAAGAGGGTAATGCGTTGGATGAGGCAGACATTACGACT
GAAATGAAGGTATTAAGGAGAATTGGTATCGCGGGCAGTCACCAGAATGT
CATCAGCCAGTGTGCAATTGCAGACAAAGATGATTACAAGTGGGTTCTAC
ACACCAATCGTCATCACTACACTTTGAGGGAGGTGGTGACTGAATTGACA
TCTGAAGACCTCCTAACCATCAACTTGGACGTGATAAAGGCCTTGAACTT
CTTGCACCGAAACGACATCGTCCTTGGCAGAATGTCACTGGAGACTCTCT
TAGTCGTAAAGGAGCCGCAGTTGACGGTCATCGTTGCTGATTTCTCCAAT
GCCAGGATCGTCGAAAAAGAAAACAACCACAGAAAAGTCTTTGATTTCGA
CTTTCGGGAATGGAAGAAACTGAAACGTGTTGTCGAACGTCGCTCTACCA
GTCTGATGGGCAACACCGTCACCTTGATTCACTATATTGTACAAAAATCA
ACTCAGTCATCGACGTTTTTCTGCTGTAACCTCGCAATAGCCGACGGTCT
TTCGGGGATATACTTAATAATCATTTCATCGGCGAATGTTTATTTCAGAG
ATAGGTATTTTCTTGAAGATCAAAAATGGCGCTCTCATATAGCATGTAGC
ATAGCAGGAGGGCTGATTGTGTTTAGCAAAATGGCTTCCCTTACGATACT
CGTAGCACTCGTTTCAGACATGTACGTGGTATCCCGACTGATTACAACTC
GGTGGAAATGTATCTGTAATGTGATTATGATGACGTTATGTTGGCTGTTT
GCGCTCCTATGTACTATCCTCCCCATGCGTTTTCCACTCGATGAGGTAAA
AGACGAAGCAACGTCTGCTGCCTGTTCGCCATTTGTTGACATCGTTCGAA
AACAGGGGAAGTGGAGACACTGGTTTGTGCTGCTAGTTGCTCTACCAACC
ATCATGGTAGTGGCATCAATAGCCTTATGGGGATTATGCTGCTTTGCAGA
GGGATTTTATAGAACAAAAAATACCAAAAAATGCGTAAAGCACCCGGAGA
GTCAGTGGACAATGAAGCTGATAATTGCTACAAATTCCATAAGCTGGCTG
TTTGTTGCTTCCGTTGGAATGTTTTGTACCACGGAAGATGAAACTGTTGT
CGTGTTAGTGCCGTGGGTGGTGCTTTTCGTTGTTCCCCTCACCTCGGGAC
TGAATCCGCTGATTCAACTGGCGACGATCACACCGAGTTGGTTCACGAGG
AGAGAGGTGTATGCCAAGAAAGATGAGGAAGGAAACTCGTACACGTCTGG
GGACCAGCTCAGGTGGCGTCTGCATGGAGCTTCCTCTTGTCTAGCTGGTC
ATGAGCTCGGCGTCGTTGCAAAGAGAGACAACGCTGAACAGATGCAGTTG
TATTTGCAGTGCCTTGAAAACGATGTTGAACCTATCCATGTAACAAAAGT
ATTGCTGCAATTCAACAAAGAGGGTAATGCGTTGGATGAGGCAGACATTA
CGACTGAAATGAAGGTATTAAGGAGAATTGGTATCGCGGGCAGTCACCAG
AATGTCATCAGCCAGTGTGCAATTGCAGACAAAGATGATTACAAGTGGGT
TCTACACACCAATCGTCATCACTACACTTTGAGGGAGGTGGTGACTGAAT
TGACATCTGAAGACCTCCTAACCATCAACTTGGACGTGATAAAGGCCTTG
AACTTCTTGCACCGAAACGACATCGTCCTTGGCAGAATGTCACTGGAGAC
TCTCTTAGTCGTAAAGGAGCCGCAGTTGACGGTCATCGTTGCTGATTTCT
CCAATGCCAGGATCGTCGAAAAAGAAAACAACCACAGAAAAGTCTTTGAT
TTCGACTTTCGGGAATGGAAGAAACTGAAACGTGTTGTCGAACGTCGCTC
TACCAGTCTGATGGGCAACACCGTCACCTTGATTCACTATATTGTACAAA
AATCAACTCAGTCATCGACGTTTTTCTGCTGTAACCTCGCAATAGCCGAC
GGTCTTTCGGGGATATACTTAATAATCATTTCATCGGCGAATGTTTATTT
CAGAGATAGGTATTTTCTTGAAGATCAAAAATGGCGCTCTCATATAGCAT
GTAGCATAGCAGGAGGGCTGATTGTGTTTAGCAAAATGGCTTCCCTTACG
ATACTCGTAGCACTCGTTTCAGACATGTACGTGGTATCCCGACTGATTAC
AACTCGGTGGAAATGTATCTGTAATGTGATTATGATGACGTTATGTTGGC
TGTTTGCGCTCCTATGTACTATCCTCCCCATGCGTTTTCCACTCGATGAG
GTAAAAGACGAAGCAACGTCTGCTGCCTGTTCGCCATTTGTTGACATCGT
TCGAAAACAGGGGAAGTGGAGACACTGGTTTGTGCTGCTAGTTGCTCTAC
CAACCATCATGGTAGTGGCATCAATAGCCTTATGGGGATTATGCTGCTTT
GCAGAGGGATTTTATAGAACAAAAAATACCAAAAAATGCGTAAAGCACCC
GGAGAGTCAGTGGACAATGAAGCTGATAATTGCTACAAATTCCATAAGCT
GGCTGTTTGTTGCTTCCGTTGGAATGTTTTGTACCACGGAAGATGAAACT
GTTGTCGTGTTAGTGCCGTGGGTGGTGCTTTTCGTTGTTCCCCTCACCTC
GGGACTGAATCCGCTGATTCAACTGGCGACGATCACACCGAGTTGGTTCA
CGAGGAGAGAGGTGTATGCCAAGAAAGATGAGGAAGGAAACTCGTACACG
TCTGGGGACCAGCTCAGGTGGCGTCTGCATGGAGCTTCCTCTTGTCTAGC
TGGTCATGAGCTCGGCGTCGTTGCAAAGAGAGACAACGCTGAACAGATGC
AGTTGTATTTGCAGTGCCTTGAAAACGATGTTGAACCTATCCATGTAACA
AAAGTATTGCTGCAATTCAACAAAGAGGGTAATGCGTTGGATGAGGCAGA
CATTACGACTGAAATGAAGGTATTAAGGAGAATTGGTATCGCGGGCAGTC
ACCAGAATGTCATCAGCCAGTGTGCAATTGCAGACAAAGATGATTACAAG
TGGGTTCTACACACCAATCGTCATCACTACACTTTGAGGGAGGTGGTGAC
TGAATTGACATCTGAAGACCTCCTAACCATCAACTTGGACGTGATAAAGG
CCTTGAACTTCTTGCACCGAAACGACATCGTCCTTGGCAGAATGTCACTG
GAGACTCTCTTAGTCGTAAAGGAGCCGCAGTTGACGGTCATCGTTGCTGA
TTTCTCCAATGCCAGGATCGTCGAAAAAGAAAACAACCACAGAAAAGTCT
TTGATTTCGACTTTCGGGAATGGAAGAAACTGAAACGTGTTGTCGAACGT
CGCTCTACCAGTCTGATGGGCAACACCGTCACCTTGATTCACTATATTGT
ACAAAAATCAACTCAGTCATCGACGTTTTTCTGCTGTAACCTCGCAATAG
CCGACGGTCTTTCGGGGATATACTTAATAATCATTTCATCGGCGAATGTT
TATTTCAGAGATAGGTATTTTCTTGAAGATCAAAAATGGCGCTCTCATAT
AGCATGTAGCATAGCAGGAGGGCTGATTGTGTTTAGCAAAATGGCTTCCC
TTACGATACTCGTAGCACTCGTTTCAGACATGTACGTGGTATCCCGACTG
ATTACAACTCGGTGGAAATGTATCTGTAATGTGATTATGATGACGTTATG
TTGGCTGTTTGCGCTCCTATGTACTATCCTCCCCATGCGTTTTCCACTCG
ATGAGGTAAAAGACGAAGCAACGTCTGCTGCCTGTTCGCCATTTGTTGAC
ATCGTTCGAAAACAGGGGAAGTGGAGACACTGGTTTGTGCTGCTAGTTGC
TCTACCAACCATCATGGTAGTGGCATCAATAGCCTTATGGGGATTATGCT
GCTTTGCAGAGGGATTTTATAGAACAAAAAATACCAAAAAATGCGTAAAG
CACCCGGAGAGTCAGTGGACAATGAAGCTGATAATTGCTACAAATTCCAT
AAGCTGGCTGTTTGTTGCTTCCGTTGGAATGTTTTGTACCACGGAAGATG
AAACTGTTGTCGTGTTAGTGCCGTGGGTGGTGCTTTTCGTTGTTCCCCTC
ACCTCGGGACTGAATCCGCTGATTCAACTGGCGACGATCACACCGAGTTG
GTTCACGAGGAGAGAGGTGTATGCCAAGAAAGATGAGGAAGGAAACTCGT
ACACGTCTGGGGACCAGCTCAGGTGGCGTCTGCATGGAGCTTCCTCTTGT
CTAGCTGGTCATGAGCTCGGCGTCGTTGCAAAGAGAGACAACGCTGAACA
GATGCAGTTGTATTTGCAGTGCCTTGAAAACGATGTTGAACCTATCCATG
TAACAAAAGTATTGCTGCAATTCAACAAAGAGGGTAATGCGTTGGATGAG
GCAGACATTACGACTGAAATGAAGGTATTAAGGAGAATTGGTATCGCGGG
CAGTCACCAGAATGTCATCAGCCAGTGTGCAATTGCAGACAAAGATGATT
ACAAGTGGGTTCTACACACCAATCGTCATCACTACACTTTGAGGGAGGTG
GTGACTGAATTGACATCTGAAGACCTCCTAACCATCAACTTGGACGTGAT
AAAGGCCTTGAACTTCTTGCACCGAAACGACATCGTCCTTGGCAGAATGT
CACTGGAGACTCTCTTAGTCGTAAAGGAGCCGCAGTTGACGGTCATCGTT
GCTGATTTCTCCAATGCCAGGATCGTCGAAAAAGAAAACAACCACAGAAA
AGTCTTTGATTTCGACTTTCGGGAATGGAAGAAACTGAAACGTGTTGTCG
AACGTCGCTCTACCAGTCTGATGGGCAACACCGTCACCTTGATTCACTAT
ATTGTACAAAAATCAACTCAGTCATCGACGTTTTTCTGCTGTAACCTCGC
AATAGCCGACGGTCTTTCGGGGATATACTTAATAATCATTTCATCGGCGA
ATGTTTATTTCAGAGATAGGTATTTTCTTGAAGATCAAAAATGGCGCTCT
CATATAGCATGTAGCATAGCAGGAGGGCTGATTGTGTTTAGCAAAATGGC
TTCCCTTACGATACTCGTAGCACTCGTTTCAGACATGTACGTGGTATCCC
GACTGATTACAACTCGGTGGAAATGTATCTGTAATGTGATTATGATGACG
TTATGTTGGCTGTTTGCGCTCCTATGTACTATCCTCCCCATGCGTTTTCC
ACTCGATGAGGTAAAAGACGAAGCAACGTCTGCTGCCTGTTCGCCATTTG
TTGACATCGTTCGAAAACAGGGGAAGTGGAGACACTGGTTTGTGCTGCTA
GTTGCTCTACCAACCATCATGGTAGTGGCATCAATAGCCTTATGGGGATT
ATGCTGCTTTGCAGAGGGATTTTATAGAACAAAAAATACCAAAAAATGCG
TAAAGCACCCGGAGAGTCAGTGGACAATGAAGCTGATAATTGCTACAAAT
TCCATAAGCTGGCTGTTTGTTGCTTCCGTTGGAATGTTTTGTACCACGGA
AGATGAAACTGTTGTCGTGTTAGTGCCGTGGGTGGTGCTTTTCGTTGTTC
CCCTCACCTCGGGACTGAATCCGCTGATTCAACTGGCGACGATCACACCG
AGTTGGTTCACGAGGAGAGAGGTGTATGCCAAGAAAGATGAGGAAGGAAA
CTCGTACACGTCTGGGGACCAGCTCAGGTGGCGTCTGCATGGAGCTTCCT
CTTGTCTAGCTGGTCATGAGCTCGGCGTCGTTGCAAAGAGAGACAACGCT
GAACAGATGCAGTTGTATTTGCAGTGCCTTGAAAACGATGTTGAACCTAT
CCATGTAACAAAAGTATTGCTGCAATTCAACAAAGAGGGTAATGCGTTGG
ATGAGGCAGACATTACGACTGAAATGAAGGTATTAAGGAGAATTGGTATC
GCGGGCAGTCACCAGAATGTCATCAGCCAGTGTGCAATTGCAGACAAAGA
TGATTACAAGTGGGTTCTACACACCAATCGTCATCACTACACTTTGAGGG
AGGTGGTGACTGAATTGACATCTGAAGACCTCCTAACCATCAACTTGGAC
GTGATAAAGGCCTTGAACTTCTTGCACCGAAACGACATCGTCCTTGGCAG
AATGTCACTGGAGACTCTCTTAGTCGTAAAGGAGCCGCAGTTGACGGTCA
TCGTTGCTGATTTCTCCAATGCCAGGATCGTCGAAAAAGAAAACAACCAC
AGAAAAGTCTTTGATTTCGACTTTCGGGAATGGAAGAAACTGAAACGTGT
TGTCGAACGTCGCTCTACCAGTCTG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
gene:BL96517gene:BL96517Branchiostoma lanceolatumgene
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
BL96517_cuf2-E1BL96517_cuf2-E1-1564476830-69160Branchiostoma lanceolatumexon
BL96517_cuf2-E2BL96517_cuf2-E2-1564476830-69162Branchiostoma lanceolatumexon
BL96517_cuf2-E3BL96517_cuf2-E3-1564476830-69164Branchiostoma lanceolatumexon
BL96517_cuf2-E4BL96517_cuf2-E4-1564476830-69166Branchiostoma lanceolatumexon
BL96517_cuf2-E5BL96517_cuf2-E5-1564476830-69168Branchiostoma lanceolatumexon
BL96517_cuf2-E6BL96517_cuf2-E6-1564476830-69170Branchiostoma lanceolatumexon
BL96517_cuf2-E7BL96517_cuf2-E7-1564476830-69172Branchiostoma lanceolatumexon
BL96517_cuf2-E8BL96517_cuf2-E8-1564476830-69174Branchiostoma lanceolatumexon
BL96517_cuf2-E9BL96517_cuf2-E9-1564476830-69176Branchiostoma lanceolatumexon
BL96517_cuf2-E10BL96517_cuf2-E10-1564476830-69179Branchiostoma lanceolatumexon
BL96517_cuf2-E11BL96517_cuf2-E11-1564476830-69181Branchiostoma lanceolatumexon
BL96517_cuf2-E12BL96517_cuf2-E12-1564476830-69183Branchiostoma lanceolatumexon
BL96517_cuf2-E13BL96517_cuf2-E13-1564476830-69185Branchiostoma lanceolatumexon
BL96517_cuf2-E14BL96517_cuf2-E14-1564476830-69188Branchiostoma lanceolatumexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
transcript:BL96517_cuf2transcript:BL96517_cuf2-proteinBranchiostoma lanceolatumpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000006genomeSc0000006:3483777..3493177 +
Properties
Property NameValue
Transcript idBL96517_cuf2
Biotypeprotein_coding