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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL96511_cuf4 >transcript:BL96511_cuf4-protein ID=transcript:BL96511_cuf4-protein|Name=transcript:BL96511_cuf4|organism=Branchiostoma lanceolatum|type=polypeptide|length=410bp
GSVLLVGDEFCTSKGGISTINLNVARKLTAAGAEVYATVLEASEQDERDA
ERDGVKLLKARLDADSSAKPSLEWLTVYHSVHFPHIPQDVCCIVGHVDVT
SRAARKIKEERFPHAKLAMFGHVAPEETEHYKSDEKALGVGRKEASIQED
IGKADVVFSVGARIHRHYDWFLRRNHVDHYIFLPEPSKVFREANVSFDEE
SEKVRKPERVVLSTGRVRDVEMLKGHDLAAGAMDKVSQRLDGQYTLRLRV
RGIDENDFKESKRILEEKLRSGRVKPTLLPYGTQEEIRRDMENCHLVLMP
SRAEPFGLVGLEAIAAGVPVLISEHSGLAELIEELSDRLGQPTFRHCIVK
MKGDTATDGDAEKWAERIEDVLKNARSEFAEARAFREKLLASKYWEESHQ
KFLQACGITG Run BLAST on NCBI mRNA from alignment at Sc0000006:6454846..6456078+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL96511_cuf4 ID=transcript:BL96511_cuf4|Name=transcript:BL96511_cuf4|organism=Branchiostoma lanceolatum|type=mRNA|length=1233bp|location=Sequence derived from alignment at Sc0000006:6454846..6456078+ (Branchiostoma lanceolatum)
AAGGTTCAGTCCTGCTGGTTGGAGATGAATTCTGCACATCGAAGGGCGGA
ATCTCCACCATCAACCTGAACGTCGCGCGCAAGCTCACCGCTGCTGGCGC
CGAGGTCTACGCTACCGTGTTGGAGGCAAGTGAACAAGATGAGAGGGATG
CAGAGCGAGACGGGGTCAAACTCCTCAAAGCTCGCCTTGATGCCGACAGC
AGCGCGAAGCCGTCCCTAGAGTGGCTGACTGTGTACCACAGCGTTCACTT
TCCGCACATTCCACAAGACGTCTGCTGCATTGTAGGCCATGTTGACGTCA
CCAGCAGAGCAGCGAGGAAGATCAAGGAAGAGCGATTTCCGCACGCCAAG
CTTGCCATGTTCGGCCACGTGGCGCCAGAGGAGACAGAGCACTACAAGAG
TGACGAGAAGGCCCTGGGTGTGGGGAGGAAGGAAGCCAGCATCCAGGAAG
ACATCGGCAAGGCTGATGTCGTCTTCTCCGTAGGAGCGCGCATTCACCGC
CACTACGACTGGTTCCTCCGTCGGAATCACGTGGATCACTACATCTTCCT
ACCTGAGCCTTCAAAGGTGTTCAGAGAAGCAAATGTGAGCTTTGATGAAG
AAAGTGAAAAAGTCCGAAAGCCAGAGAGAGTGGTTCTGTCTACTGGCAGG
GTGCGGGATGTGGAGATGCTGAAAGGTCACGACCTGGCCGCAGGAGCCAT
GGACAAGGTGTCACAACGTCTTGATGGTCAGTACACGCTGAGGTTGAGAG
TCCGCGGCATCGATGAGAACGACTTCAAGGAGAGCAAGAGAATCCTGGAG
GAGAAGCTGAGATCCGGGCGGGTCAAGCCCACACTGCTTCCGTACGGCAC
TCAAGAGGAGATCCGCCGAGACATGGAGAACTGTCACCTGGTCCTGATGC
CGTCTCGGGCTGAACCGTTCGGACTGGTCGGCCTGGAGGCCATCGCGGCA
GGAGTTCCCGTCCTCATCTCTGAGCACTCGGGACTCGCAGAGCTGATAGA
GGAGCTATCAGACAGGCTGGGGCAGCCCACGTTCCGCCACTGCATCGTCA
AGATGAAGGGAGACACCGCGACCGACGGGGATGCAGAGAAGTGGGCAGAA
AGAATCGAGGATGTCCTCAAGAACGCCAGGTCAGAGTTCGCGGAAGCACG
CGCCTTCAGGGAGAAACTGCTGGCCTCCAAGTACTGGGAAGAGTCTCACC
AGAAGTTCCTACAGGCCTGCGGCATCACTGGTA Coding sequence (CDS) from alignment at Sc0000006:6454846..6456078+ >transcript:BL96511_cuf4 ID=transcript:BL96511_cuf4|Name=transcript:BL96511_cuf4|organism=Branchiostoma lanceolatum|type=CDS|length=1230bp|location=Sequence derived from alignment at Sc0000006:6454846..6456078+ (Branchiostoma lanceolatum)
GGTTCAGTCCTGCTGGTTGGAGATGAATTCTGCACATCGAAGGGCGGAAT
CTCCACCATCAACCTGAACGTCGCGCGCAAGCTCACCGCTGCTGGCGCCG
AGGTCTACGCTACCGTGTTGGAGGCAAGTGAACAAGATGAGAGGGATGCA
GAGCGAGACGGGGTCAAACTCCTCAAAGCTCGCCTTGATGCCGACAGCAG
CGCGAAGCCGTCCCTAGAGTGGCTGACTGTGTACCACAGCGTTCACTTTC
CGCACATTCCACAAGACGTCTGCTGCATTGTAGGCCATGTTGACGTCACC
AGCAGAGCAGCGAGGAAGATCAAGGAAGAGCGATTTCCGCACGCCAAGCT
TGCCATGTTCGGCCACGTGGCGCCAGAGGAGACAGAGCACTACAAGAGTG
ACGAGAAGGCCCTGGGTGTGGGGAGGAAGGAAGCCAGCATCCAGGAAGAC
ATCGGCAAGGCTGATGTCGTCTTCTCCGTAGGAGCGCGCATTCACCGCCA
CTACGACTGGTTCCTCCGTCGGAATCACGTGGATCACTACATCTTCCTAC
CTGAGCCTTCAAAGGTGTTCAGAGAAGCAAATGTGAGCTTTGATGAAGAA
AGTGAAAAAGTCCGAAAGCCAGAGAGAGTGGTTCTGTCTACTGGCAGGGT
GCGGGATGTGGAGATGCTGAAAGGTCACGACCTGGCCGCAGGAGCCATGG
ACAAGGTGTCACAACGTCTTGATGGTCAGTACACGCTGAGGTTGAGAGTC
CGCGGCATCGATGAGAACGACTTCAAGGAGAGCAAGAGAATCCTGGAGGA
GAAGCTGAGATCCGGGCGGGTCAAGCCCACACTGCTTCCGTACGGCACTC
AAGAGGAGATCCGCCGAGACATGGAGAACTGTCACCTGGTCCTGATGCCG
TCTCGGGCTGAACCGTTCGGACTGGTCGGCCTGGAGGCCATCGCGGCAGG
AGTTCCCGTCCTCATCTCTGAGCACTCGGGACTCGCAGAGCTGATAGAGG
AGCTATCAGACAGGCTGGGGCAGCCCACGTTCCGCCACTGCATCGTCAAG
ATGAAGGGAGACACCGCGACCGACGGGGATGCAGAGAAGTGGGCAGAAAG
AATCGAGGATGTCCTCAAGAACGCCAGGTCAGAGTTCGCGGAAGCACGCG
CCTTCAGGGAGAAACTGCTGGCCTCCAAGTACTGGGAAGAGTCTCACCAG
AAGTTCCTACAGGCCTGCGGCATCACTGGT
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000006 | genome | Sc0000006:6454846..6456078 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL96511_cuf4 |
| Biotype | protein_coding |
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